In [2]:
suppressMessages(library(ArchR))
library(parallel)
ss <- function(x, pattern, slot = 1, ...) { sapply(strsplit(x = x, split = pattern, ...), '[', slot) }
options(stringsAsFactors = F)
options(repr.plot.width=18, repr.plot.height=13)
suppressMessages(library(Seurat))
suppressMessages(library(SingleCellExperiment))
library(tidyverse)

── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ tibble  3.1.8      ✔ purrr   0.3.5 
✔ tidyr   1.2.1      ✔ dplyr   1.0.10
✔ readr   2.1.2      ✔ forcats 0.5.2 
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::arrange()         masks plyr::arrange()
✖ dplyr::between()         masks data.table::between()
✖ dplyr::collapse()        masks IRanges::collapse()
✖ dplyr::combine()         masks Biobase::combine(), BiocGenerics::combine(), gridExtra::combine()
✖ purrr::compact()         masks plyr::compact()
✖ dplyr::count()           masks matrixStats::count(), plyr::count()
✖ dplyr::desc()            masks IRanges::desc(), plyr::desc()
✖ tidyr::expand()          masks Matrix::expand(), S4Vectors::expand()
✖ tidyr::extract()         masks magrittr::extract()
✖ dplyr::failwith()        masks plyr::failwith()
✖ dplyr::filter()          masks stats::filter()
✖ dplyr::first()           masks S4Vectors::first(), data.table::first()
✖ dplyr::id()              masks plyr::id()
✖ dplyr::lag()             masks stats::lag()
✖ dplyr::last()            masks data.table::last()
✖ dplyr::mutate()          masks plyr::mutate()
✖ tidyr::pack()            masks Matrix::pack()
✖ BiocGenerics::Position() masks ggplot2::Position(), base::Position()
✖ purrr::reduce()          masks GenomicRanges::reduce(), IRanges::reduce()
✖ dplyr::rename()          masks S4Vectors::rename(), plyr::rename()
✖ purrr::set_names()       masks magrittr::set_names()
✖ dplyr::slice()           masks IRanges::slice()
✖ dplyr::summarise()       masks plyr::summarise()
✖ dplyr::summarize()       masks plyr::summarize()
✖ purrr::transpose()       masks data.table::transpose()
✖ tidyr::unpack()          masks Matrix::unpack()
In [3]:
##################################
### set Arrow File parameters ####
addArchRThreads(threads = 8)

##################################
### load mm ArchR genome ###
addArchRGenome('mm10')

Setting default number of Parallel threads to 8.

Setting default genome to Mm10.
In [4]:
PROJDIR='../../../data/tidy_data/ArchRProjects'
proj = loadArchRProject(file.path(PROJDIR,'Mouse_DorsalHorn_scATAC'), showLogo = FALSE)
projNeuron = loadArchRProject(file.path(PROJDIR,'Mouse_scATAC_DorsalHorn_neuron2'), showLogo = FALSE)
projGlia = loadArchRProject(file.path(PROJDIR,'Mouse_scATAC_DorsalHorn_glia'), showLogo = FALSE)

Successfully loaded ArchRProject!

Successfully loaded ArchRProject!

Successfully loaded ArchRProject!
In [5]:
proj
projNeuron
projGlia

           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
    


class: ArchRProject 
outputDirectory: /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC 
samples(12): Mouse_DH_SEA2253A58 Mouse_DH_SEA2253A59 ...
  Mouse_DH_SEA2253A68 Mouse_DH_SEA2253A69
sampleColData names(8): ArrowFiles Sample_ID ... Species Region
cellColData names(29): Sample TSSEnrichment ... ReadsInPeaks FRIP
numberOfCells(1): 75955
medianTSS(1): 23.946
medianFrags(1): 16376
           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
    


class: ArchRProject 
outputDirectory: /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_scATAC_DorsalHorn_neuron2 
samples(12): Mouse_DH_SEA2253A60 Mouse_DH_SEA2253A61 ...
  Mouse_DH_SEA2253A69 Mouse_DH_SEA2253A68
sampleColData names(8): ArrowFiles Sample_ID ... Species Region
cellColData names(36): Sample TSSEnrichment ...
  predictedScore_RNA2ATACCo_cell Neuron_Type
numberOfCells(1): 20591
medianTSS(1): 20.626
medianFrags(1): 25740
           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
    


class: ArchRProject 
outputDirectory: /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_scATAC_DorsalHorn_glia 
samples(12): Mouse_DH_SEA2253A61 Mouse_DH_SEA2253A60 ...
  Mouse_DH_SEA2253A68 Mouse_DH_SEA2253A64
sampleColData names(8): ArrowFiles Sample_ID ... Species Region
cellColData names(37): Sample TSSEnrichment ... ClustersX50
  Clusters_RNALabels
numberOfCells(1): 55364
medianTSS(1): 25.181
medianFrags(1): 14350
In [8]:
#we need to standardize the column names, and choose the ones we want to keep
(names(getCellColData(projNeuron)))
(names(getCellColData(projGlia)))
getCellColData(projNeuron)
getCellColData(projGlia)
  1. 'Sample'
  2. 'TSSEnrichment'
  3. 'ReadsInTSS'
  4. 'ReadsInPromoter'
  5. 'ReadsInBlacklist'
  6. 'PromoterRatio'
  7. 'PassQC'
  8. 'NucleosomeRatio'
  9. 'nMultiFrags'
  10. 'nMonoFrags'
  11. 'nFrags'
  12. 'nDiFrags'
  13. 'DoubletScore'
  14. 'DoubletEnrichment'
  15. 'BlacklistRatio'
  16. 'Sample_ID'
  17. 'Date.nuclei.prep'
  18. 'Biological.rep'
  19. 'Age'
  20. 'Sex'
  21. 'Species'
  22. 'Region'
  23. 'ClustersI200'
  24. 'ClustersH200'
  25. 'logNFrags'
  26. 'Celltype1'
  27. 'ClustersX60'
  28. 'predictedCell_Co'
  29. 'predictedGroup_RNA2ATACCo'
  30. 'predictedScore_RNA2ATACCo'
  31. 'ClustersX20'
  32. 'ClustersX10'
  33. 'predictedCell_Co_cell'
  34. 'predictedGroup_RNA2ATACCo_cell'
  35. 'predictedScore_RNA2ATACCo_cell'
  36. 'Neuron_Type'
  1. 'Sample'
  2. 'TSSEnrichment'
  3. 'ReadsInTSS'
  4. 'ReadsInPromoter'
  5. 'ReadsInBlacklist'
  6. 'PromoterRatio'
  7. 'PassQC'
  8. 'NucleosomeRatio'
  9. 'nMultiFrags'
  10. 'nMonoFrags'
  11. 'nFrags'
  12. 'nDiFrags'
  13. 'DoubletScore'
  14. 'DoubletEnrichment'
  15. 'BlacklistRatio'
  16. 'Sample_ID'
  17. 'Date.nuclei.prep'
  18. 'Biological.rep'
  19. 'Age'
  20. 'Sex'
  21. 'Species'
  22. 'Region'
  23. 'ClustersI200'
  24. 'ClustersH200'
  25. 'logNFrags'
  26. 'Celltype1'
  27. 'ClustersX60'
  28. 'predictedCell_Co'
  29. 'predictedGroup_RNA2ATACCo'
  30. 'predictedScore_RNA2ATACCo'
  31. 'ClustersX10_tmp'
  32. 'ClustersX10'
  33. 'ClustersX20'
  34. 'ClustersX30'
  35. 'ClustersX40'
  36. 'ClustersX50'
  37. 'Clusters_RNALabels'
DataFrame with 20591 rows and 36 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA Mouse_DH_SEA2253A58        14.164
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT Mouse_DH_SEA2253A58        15.910
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG Mouse_DH_SEA2253A58        10.861
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG Mouse_DH_SEA2253A58        17.269
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC Mouse_DH_SEA2253A58        18.201
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG Mouse_DH_SEA2253A69         8.303
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG Mouse_DH_SEA2253A69         9.596
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC Mouse_DH_SEA2253A69        50.724
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG Mouse_DH_SEA2253A69        31.498
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT Mouse_DH_SEA2253A69        30.471
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       6788           24952
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       6990           25965
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       4355           16936
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       7718           27008
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       7445           25859
...                                         ...             ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG        348            1581
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG        378            1668
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC       1332            3902
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG       1193            3754
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT        754            2477
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA             3777      0.155608         1
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT             3880      0.176551         1
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG             3561      0.115299         1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG             4147      0.185642         1
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC             5408      0.183335         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG              244      0.117094         1
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG              202      0.128052         1
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC              340      0.301966         1
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG              240      0.302742         1
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT              247      0.256365         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA        0.919877        6002      41761
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT        1.359279        8719      31168
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        1.350735        7665      31243
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG        0.868773        4609      38925
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC        0.883453        5368      37444
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG        6.054336        1442        957
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG        8.808735        1299        664
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC        0.137300         189       5681
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG        0.130562         152       5484
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT        0.661279         368       2908
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     80176     32413            0
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     73534     33647            0
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     73444     34536            0
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     72742     29208            0
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     70524     27712            0
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG      6751      4352            0
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG      6513      4550            0
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC      6461       591            0
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG      6200       564            0
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT      4831      1555            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         0.3000000      0.0235544
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT         0.0666667      0.0263824
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         0.2666667      0.0242430
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         0.4000000      0.0285049
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         0.5666667      0.0383416
...                                                ...            ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG         1.0222222      0.0180714
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG         0.2222222      0.0155074
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC         0.0222222      0.0263117
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG         0.0000000      0.0193548
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT         0.2000000      0.0255641
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       Mouse  DorsalHorn           C9
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG       Mouse  DorsalHorn          C14
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG       Mouse  DorsalHorn           C5
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC       Mouse  DorsalHorn          C15
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG       Mouse  DorsalHorn          C15
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT       Mouse  DorsalHorn          C15
                                     ClustersH200 logNFrags   Celltype1
                                      <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C14   4.90404         EXC
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C11   4.86649         EXC
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG          C11   4.86596         EXC
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG          C11   4.86179         EXC
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC          C11   4.84834         EXC
...                                           ...       ...         ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG          C14   3.82937         EXC
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG           C7   3.81378         INH
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC          C15   3.81030         EXC
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG          C15   3.79239         EXC
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT          C15   3.68404         EXC
                                     ClustersX60 predictedCell_Co
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C6              564
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C9             2290
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         C12                2
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         C10             4496
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         C16             1570
...                                          ...              ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG         C22            10242
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG         C17             8674
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC         C20             8839
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG         C20             1590
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT         C20             8839
                                     predictedGroup_RNA2ATACCo
                                                   <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                   midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                   midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                  Inh-Cdh3
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                   midVent
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                  Inh-Rorb
...                                                        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                   Ex-Sox5
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG               Inh-Adamts5
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                   Ex-Reln
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                   Ex-Reln
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                   Ex-Reln
                                     predictedScore_RNA2ATACCo ClustersX20
                                                     <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                  0.893739          C4
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                  0.805882         C16
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                  0.931563         C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                  0.564452          C1
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                  0.537839         C13
...                                                        ...         ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                  0.665456         C18
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                  0.949357         C14
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                  0.819760         C25
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                  0.991770         C25
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                  0.881383         C25
                                     ClustersX10 predictedCell_Co_cell
                                     <character>           <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         C24                   564
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C6                  2290
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         C15                     2
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         C18                  4496
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         C17                  1570
...                                          ...                   ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG         C11                 10242
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG         C13                  8674
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC          C5                  8839
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG          C5                  1590
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT          C5                  8839
                                     predictedGroup_RNA2ATACCo_cell
                                                        <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                         midVen
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                         midVen
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                          GABA1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                         midVen
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                          GABA4
...                                                             ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                          GLUT4
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                          GABA4
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                          GLUT2
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                          GLUT2
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                          GLUT2
                                     predictedScore_RNA2ATACCo_cell
                                                          <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                       0.893739
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                       0.805882
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                       0.931563
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                       0.564452
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                       0.413136
...                                                             ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                       0.551314
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                       0.918794
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                       0.636967
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                       0.909557
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                       0.705046
                                      Neuron_Type
                                      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA      midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT      midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        GABA?
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG      midVent
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC GABA2_1, 4_1
...                                           ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG  GLUT3,4,5,6
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG GABA2_2, 4_2
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC      GLUT1,2
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG      GLUT1,2
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT      GLUT1,2
DataFrame with 55364 rows and 37 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC Mouse_DH_SEA2253A58        25.310
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA Mouse_DH_SEA2253A58        22.083
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA Mouse_DH_SEA2253A58        17.626
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA Mouse_DH_SEA2253A58        20.875
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT Mouse_DH_SEA2253A58        27.022
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC Mouse_DH_SEA2253A69        10.693
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG Mouse_DH_SEA2253A69        17.317
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA Mouse_DH_SEA2253A69        11.675
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT Mouse_DH_SEA2253A69        13.119
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG Mouse_DH_SEA2253A69        30.716
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC      13881           45719
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA      10115           32514
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA       6649           22899
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA       8170           26951
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT      10289           33743
...                                         ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        243            1056
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        446            1576
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        283            1280
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        318            1255
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        667            2131
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC             3927      0.314804         1
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA             3483      0.260558         1
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA             2330      0.192571         1
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA             2008      0.239944         1
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT             2950      0.309251         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC              138      0.156816         1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG              268      0.235505         1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA              208      0.194057         1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT              164      0.192780         1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG              170      0.332449         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC        0.627884        6400      44607
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA        0.573832        2659      39644
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA        0.819562        4093      32676
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA        0.555103        2597      36114
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT        0.539651        5091      35434
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        9.203030         721        330
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        1.428157         438       1378
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        4.676420         681        581
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        7.410853         707        387
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        0.510368         150       2122
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     72615     21608     0.000000
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA     62393     20090     0.000000
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA     59456     22687     0.000000
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA     56161     17450     0.000000
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT     54556     14031     0.935077
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC      3367      2316            0
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG      3346      1530            0
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA      3298      2036            0
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT      3255      2161            0
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG      3205       933            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          0.766667      0.0270399
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA          0.116667      0.0279118
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA          0.600000      0.0195943
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA          0.766667      0.0178772
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          1.683333      0.0270364
...                                                ...            ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         0.2444444      0.0204930
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         0.0222222      0.0400478
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         0.0000000      0.0315343
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         0.3555556      0.0251920
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         0.6444444      0.0265211
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC       Mouse  DorsalHorn          C20
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA       Mouse  DorsalHorn          C25
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA       Mouse  DorsalHorn          C25
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT       Mouse  DorsalHorn          C20
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG       Mouse  DorsalHorn          C24
                                     ClustersH200 logNFrags   Celltype1
                                      <character> <numeric> <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C20   4.86103       Micro
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA          C24   4.79514       Oligo
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA          C25   4.77420         OPC
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA          C25   4.74943         OPC
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          C20   4.73684       Micro
...                                           ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC          C24   3.52724       Oligo
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG           C1   3.52453       Micro
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA           C1   3.51825       Micro
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT          C24   3.51255       Oligo
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG          C24   3.50583       Oligo
                                     ClustersX60 predictedCell_Co
                                     <character>      <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C1             4470
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA         C15             4345
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA         C17             1603
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA         C11             6524
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          C1             6325
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         C16             9822
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         C20             6548
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         C20            10602
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         C16             9822
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         C19             2160
                                     predictedGroup_RNA2ATACCo
                                                   <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC           Ependymal.cells
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA                   Oligo.1
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA                   Oligo.1
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA                       OPC
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT           Ependymal.cells
...                                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                   Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                 Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                 Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                   Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                   Oligo.1
                                     predictedScore_RNA2ATACCo ClustersX10_tmp
                                                     <numeric>     <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC                  0.886978              C1
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA                  0.867585             C24
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA                  0.819972             C28
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA                  0.847185             C40
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT                  0.815882              C1
...                                                        ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                  0.925414             C23
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                  1.000000             C46
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                  0.981841             C46
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                  0.968747             C23
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                  0.860995             C39
                                     ClustersX10 ClustersX20 ClustersX30
                                     <character> <character> <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C1          C1          C7
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA         C18         C18         C24
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA          C8         C11         C19
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA          C9          C9         C16
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          C2          C2          C7
...                                          ...         ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         C16         C19         C25
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         C20         C20          C1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         C20         C20          C1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         C17         C16         C21
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         C15         C16         C22
                                     ClustersX40 ClustersX50 Clusters_RNALabels
                                     <character> <character>        <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C7          C7    Ependymal.cells
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA         C21         C20            Oligo.1
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA         C19         C16            Oligo.1
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA         C16         C17                OPC
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          C7          C7    Ependymal.cells
...                                          ...         ...                ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         C20         C21            Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG          C1          C1          Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA          C1          C1          Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         C24         C24            Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         C25         C25            Oligo.1
In [14]:
#explain why each column is being dropped
#NEURONS
Neur_vec <-c('Sample','TSSEnrichment','ReadsInTSS','ReadsInPromoter','ReadsInBlacklist','PromoterRatio','PassQC',
             'NucleosomeRatio','nMultiFrags','nMonoFrags','nFrags','nDiFrags','DoubletScore','DoubletEnrichment',
             'BlacklistRatio','Sample_ID','Date.nuclei.prep','Biological.rep','Age','Sex','Species','Region','ClustersI200',
             'ClustersH200','logNFrags','Celltype1','ClustersX60','predictedCell_Co','predictedGroup_RNA2ATACCo',
             'predictedScore_RNA2ATACCo','predictedCell_Co_cell','predictedGroup_RNA2ATACCo_cell',
             'predictedScore_RNA2ATACCo_cell')
df_Neuron = getCellColData(projNeuron, select = Neur_vec) #Neuron_type was manual annotations that aren't relevant anymore
df_Neuron
#SWITCH Celltype1<-PREDICTED LABELS<-Predicted Labels_cell, DROP MOUSE_FAMILY LABELS
df_Neuron$Celltype1 <- projNeuron$predictedGroup_RNA2ATACCo
df_Neuron$predictedCell_Co <- projNeuron$predictedCell_Co_cell
df_Neuron$predictedGroup_RNA2ATACCo <- projNeuron$predictedGroup_RNA2ATACCo_cell
df_Neuron$predictedScore_RNA2ATACCo <- projNeuron$predictedScore_RNA2ATACCo_cell
df_Neuron = df_Neuron[,-(31:33)]
df_Neuron

#GLIA
drop = c("ClustersX10_tmp",'ClustersX10','ClustersX20','ClustersX30','ClustersX40','ClustersX50')
Glia_vec <- names(getCellColData(projGlia))
Glia_vec <- Glia_vec[Glia_vec %ni% drop]
Glia_vec #names of columns we want to keep
df_Glia = getCellColData(projGlia, select = Glia_vec)
#REPLACE CELLTYPE1 WITH CLUSTERS_RNALABELS
df_Glia$Celltype1 = df_Glia$Clusters_RNALabels
df_Glia = df_Glia[,-31]
df_Glia

DataFrame with 20591 rows and 33 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA Mouse_DH_SEA2253A58        14.164
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT Mouse_DH_SEA2253A58        15.910
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG Mouse_DH_SEA2253A58        10.861
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG Mouse_DH_SEA2253A58        17.269
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC Mouse_DH_SEA2253A58        18.201
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG Mouse_DH_SEA2253A69         8.303
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG Mouse_DH_SEA2253A69         9.596
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC Mouse_DH_SEA2253A69        50.724
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG Mouse_DH_SEA2253A69        31.498
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT Mouse_DH_SEA2253A69        30.471
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       6788           24952
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       6990           25965
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       4355           16936
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       7718           27008
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       7445           25859
...                                         ...             ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG        348            1581
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG        378            1668
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC       1332            3902
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG       1193            3754
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT        754            2477
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA             3777      0.155608         1
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT             3880      0.176551         1
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG             3561      0.115299         1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG             4147      0.185642         1
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC             5408      0.183335         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG              244      0.117094         1
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG              202      0.128052         1
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC              340      0.301966         1
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG              240      0.302742         1
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT              247      0.256365         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA        0.919877        6002      41761
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT        1.359279        8719      31168
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        1.350735        7665      31243
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG        0.868773        4609      38925
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC        0.883453        5368      37444
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG        6.054336        1442        957
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG        8.808735        1299        664
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC        0.137300         189       5681
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG        0.130562         152       5484
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT        0.661279         368       2908
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     80176     32413            0
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     73534     33647            0
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     73444     34536            0
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     72742     29208            0
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     70524     27712            0
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG      6751      4352            0
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG      6513      4550            0
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC      6461       591            0
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG      6200       564            0
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT      4831      1555            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         0.3000000      0.0235544
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT         0.0666667      0.0263824
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         0.2666667      0.0242430
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         0.4000000      0.0285049
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         0.5666667      0.0383416
...                                                ...            ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG         1.0222222      0.0180714
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG         0.2222222      0.0155074
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC         0.0222222      0.0263117
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG         0.0000000      0.0193548
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT         0.2000000      0.0255641
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       Mouse  DorsalHorn           C9
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG       Mouse  DorsalHorn          C14
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG       Mouse  DorsalHorn           C5
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC       Mouse  DorsalHorn          C15
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG       Mouse  DorsalHorn          C15
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT       Mouse  DorsalHorn          C15
                                     ClustersH200 logNFrags   Celltype1
                                      <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C14   4.90404         EXC
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C11   4.86649         EXC
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG          C11   4.86596         EXC
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG          C11   4.86179         EXC
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC          C11   4.84834         EXC
...                                           ...       ...         ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG          C14   3.82937         EXC
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG           C7   3.81378         INH
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC          C15   3.81030         EXC
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG          C15   3.79239         EXC
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT          C15   3.68404         EXC
                                     ClustersX60 predictedCell_Co
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C6              564
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C9             2290
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         C12                2
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         C10             4496
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         C16             1570
...                                          ...              ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG         C22            10242
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG         C17             8674
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC         C20             8839
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG         C20             1590
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT         C20             8839
                                     predictedGroup_RNA2ATACCo
                                                   <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                   midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                   midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                  Inh-Cdh3
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                   midVent
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                  Inh-Rorb
...                                                        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                   Ex-Sox5
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG               Inh-Adamts5
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                   Ex-Reln
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                   Ex-Reln
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                   Ex-Reln
                                     predictedScore_RNA2ATACCo
                                                     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                  0.893739
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                  0.805882
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                  0.931563
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                  0.564452
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                  0.537839
...                                                        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                  0.665456
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                  0.949357
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                  0.819760
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                  0.991770
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                  0.881383
                                     predictedCell_Co_cell
                                               <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                   564
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                  2290
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                     2
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                  4496
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                  1570
...                                                    ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                 10242
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                  8674
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                  8839
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                  1590
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                  8839
                                     predictedGroup_RNA2ATACCo_cell
                                                        <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                         midVen
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                         midVen
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                          GABA1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                         midVen
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                          GABA4
...                                                             ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                          GLUT4
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                          GABA4
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                          GLUT2
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                          GLUT2
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                          GLUT2
                                     predictedScore_RNA2ATACCo_cell
                                                          <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                       0.893739
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                       0.805882
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                       0.931563
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                       0.564452
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                       0.413136
...                                                             ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                       0.551314
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                       0.918794
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                       0.636967
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                       0.909557
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                       0.705046
DataFrame with 20591 rows and 30 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA Mouse_DH_SEA2253A58        14.164
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT Mouse_DH_SEA2253A58        15.910
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG Mouse_DH_SEA2253A58        10.861
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG Mouse_DH_SEA2253A58        17.269
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC Mouse_DH_SEA2253A58        18.201
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG Mouse_DH_SEA2253A69         8.303
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG Mouse_DH_SEA2253A69         9.596
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC Mouse_DH_SEA2253A69        50.724
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG Mouse_DH_SEA2253A69        31.498
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT Mouse_DH_SEA2253A69        30.471
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       6788           24952
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       6990           25965
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       4355           16936
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       7718           27008
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       7445           25859
...                                         ...             ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG        348            1581
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG        378            1668
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC       1332            3902
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG       1193            3754
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT        754            2477
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA             3777      0.155608         1
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT             3880      0.176551         1
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG             3561      0.115299         1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG             4147      0.185642         1
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC             5408      0.183335         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG              244      0.117094         1
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG              202      0.128052         1
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC              340      0.301966         1
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG              240      0.302742         1
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT              247      0.256365         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA        0.919877        6002      41761
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT        1.359279        8719      31168
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        1.350735        7665      31243
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG        0.868773        4609      38925
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC        0.883453        5368      37444
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG        6.054336        1442        957
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG        8.808735        1299        664
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC        0.137300         189       5681
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG        0.130562         152       5484
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT        0.661279         368       2908
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     80176     32413            0
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     73534     33647            0
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     73444     34536            0
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     72742     29208            0
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     70524     27712            0
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG      6751      4352            0
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG      6513      4550            0
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC      6461       591            0
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG      6200       564            0
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT      4831      1555            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         0.3000000      0.0235544
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT         0.0666667      0.0263824
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         0.2666667      0.0242430
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         0.4000000      0.0285049
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         0.5666667      0.0383416
...                                                ...            ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG         1.0222222      0.0180714
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG         0.2222222      0.0155074
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC         0.0222222      0.0263117
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG         0.0000000      0.0193548
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT         0.2000000      0.0255641
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       Mouse  DorsalHorn           C9
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG       Mouse  DorsalHorn          C14
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG       Mouse  DorsalHorn           C5
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC       Mouse  DorsalHorn          C15
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG       Mouse  DorsalHorn          C15
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT       Mouse  DorsalHorn          C15
                                     ClustersH200 logNFrags   Celltype1
                                      <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C14   4.90404     midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C11   4.86649     midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG          C11   4.86596    Inh-Cdh3
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG          C11   4.86179     midVent
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC          C11   4.84834    Inh-Rorb
...                                           ...       ...         ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG          C14   3.82937     Ex-Sox5
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG           C7   3.81378 Inh-Adamts5
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC          C15   3.81030     Ex-Reln
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG          C15   3.79239     Ex-Reln
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT          C15   3.68404     Ex-Reln
                                     ClustersX60 predictedCell_Co
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C6              564
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C9             2290
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         C12                2
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         C10             4496
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         C16             1570
...                                          ...              ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG         C22            10242
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG         C17             8674
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC         C20             8839
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG         C20             1590
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT         C20             8839
                                     predictedGroup_RNA2ATACCo
                                                   <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                    midVen
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                    midVen
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                     GABA1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                    midVen
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                     GABA4
...                                                        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                     GLUT4
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                     GABA4
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                     GLUT2
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                     GLUT2
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                     GLUT2
                                     predictedScore_RNA2ATACCo
                                                     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                  0.893739
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                  0.805882
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                  0.931563
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                  0.564452
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                  0.413136
...                                                        ...
Mouse_DH_SEA2253A69#GACCCATCTTAGCAGG                  0.551314
Mouse_DH_SEA2253A69#GACAGGAACTTCTGAG                  0.918794
Mouse_DH_SEA2253A69#CTACGTGCTAGGTCCC                  0.636967
Mouse_DH_SEA2253A69#ATGTTTCACGCCGTTG                  0.909557
Mouse_DH_SEA2253A69#GCGTCGATGGTTGACT                  0.705046
  1. 'Sample'
  2. 'TSSEnrichment'
  3. 'ReadsInTSS'
  4. 'ReadsInPromoter'
  5. 'ReadsInBlacklist'
  6. 'PromoterRatio'
  7. 'PassQC'
  8. 'NucleosomeRatio'
  9. 'nMultiFrags'
  10. 'nMonoFrags'
  11. 'nFrags'
  12. 'nDiFrags'
  13. 'DoubletScore'
  14. 'DoubletEnrichment'
  15. 'BlacklistRatio'
  16. 'Sample_ID'
  17. 'Date.nuclei.prep'
  18. 'Biological.rep'
  19. 'Age'
  20. 'Sex'
  21. 'Species'
  22. 'Region'
  23. 'ClustersI200'
  24. 'ClustersH200'
  25. 'logNFrags'
  26. 'Celltype1'
  27. 'ClustersX60'
  28. 'predictedCell_Co'
  29. 'predictedGroup_RNA2ATACCo'
  30. 'predictedScore_RNA2ATACCo'
  31. 'Clusters_RNALabels'
DataFrame with 55364 rows and 30 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC Mouse_DH_SEA2253A58        25.310
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA Mouse_DH_SEA2253A58        22.083
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA Mouse_DH_SEA2253A58        17.626
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA Mouse_DH_SEA2253A58        20.875
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT Mouse_DH_SEA2253A58        27.022
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC Mouse_DH_SEA2253A69        10.693
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG Mouse_DH_SEA2253A69        17.317
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA Mouse_DH_SEA2253A69        11.675
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT Mouse_DH_SEA2253A69        13.119
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG Mouse_DH_SEA2253A69        30.716
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC      13881           45719
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA      10115           32514
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA       6649           22899
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA       8170           26951
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT      10289           33743
...                                         ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        243            1056
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        446            1576
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        283            1280
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        318            1255
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        667            2131
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC             3927      0.314804         1
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA             3483      0.260558         1
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA             2330      0.192571         1
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA             2008      0.239944         1
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT             2950      0.309251         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC              138      0.156816         1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG              268      0.235505         1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA              208      0.194057         1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT              164      0.192780         1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG              170      0.332449         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC        0.627884        6400      44607
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA        0.573832        2659      39644
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA        0.819562        4093      32676
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA        0.555103        2597      36114
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT        0.539651        5091      35434
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        9.203030         721        330
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        1.428157         438       1378
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        4.676420         681        581
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        7.410853         707        387
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        0.510368         150       2122
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     72615     21608     0.000000
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA     62393     20090     0.000000
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA     59456     22687     0.000000
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA     56161     17450     0.000000
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT     54556     14031     0.935077
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC      3367      2316            0
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG      3346      1530            0
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA      3298      2036            0
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT      3255      2161            0
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG      3205       933            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          0.766667      0.0270399
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA          0.116667      0.0279118
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA          0.600000      0.0195943
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA          0.766667      0.0178772
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          1.683333      0.0270364
...                                                ...            ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         0.2444444      0.0204930
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         0.0222222      0.0400478
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         0.0000000      0.0315343
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         0.3555556      0.0251920
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         0.6444444      0.0265211
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC       Mouse  DorsalHorn          C20
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA       Mouse  DorsalHorn          C25
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA       Mouse  DorsalHorn          C25
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT       Mouse  DorsalHorn          C20
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG       Mouse  DorsalHorn          C24
                                     ClustersH200 logNFrags       Celltype1
                                      <character> <numeric>     <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C20   4.86103 Ependymal.cells
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA          C24   4.79514         Oligo.1
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA          C25   4.77420         Oligo.1
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA          C25   4.74943             OPC
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          C20   4.73684 Ependymal.cells
...                                           ...       ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC          C24   3.52724         Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG           C1   3.52453       Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA           C1   3.51825       Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT          C24   3.51255         Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG          C24   3.50583         Oligo.1
                                     ClustersX60 predictedCell_Co
                                     <character>      <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C1             4470
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA         C15             4345
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA         C17             1603
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA         C11             6524
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT          C1             6325
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         C16             9822
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         C20             6548
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         C20            10602
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         C16             9822
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         C19             2160
                                     predictedGroup_RNA2ATACCo
                                                   <character>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC           Ependymal.cells
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA                   Oligo.1
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA                   Oligo.1
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA                       OPC
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT           Ependymal.cells
...                                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                   Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                 Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                 Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                   Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                   Oligo.1
                                     predictedScore_RNA2ATACCo
                                                     <numeric>
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC                  0.886978
Mouse_DH_SEA2253A58#GGTCAAGGAATCCGTA                  0.867585
Mouse_DH_SEA2253A58#GCCGTTTACGCTTTGA                  0.819972
Mouse_DH_SEA2253A58#TCAAAGGCTTCTGTGA                  0.847185
Mouse_DH_SEA2253A58#CTACTCTCTCCTCGTT                  0.815882
...                                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                  0.925414
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                  1.000000
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                  0.981841
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                  0.968747
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                  0.860995
In [15]:
Glia_columns = names(df_Glia)
Neuron_columns = names(df_Neuron)

Glia_columns
Neuron_columns
  1. 'Sample'
  2. 'TSSEnrichment'
  3. 'ReadsInTSS'
  4. 'ReadsInPromoter'
  5. 'ReadsInBlacklist'
  6. 'PromoterRatio'
  7. 'PassQC'
  8. 'NucleosomeRatio'
  9. 'nMultiFrags'
  10. 'nMonoFrags'
  11. 'nFrags'
  12. 'nDiFrags'
  13. 'DoubletScore'
  14. 'DoubletEnrichment'
  15. 'BlacklistRatio'
  16. 'Sample_ID'
  17. 'Date.nuclei.prep'
  18. 'Biological.rep'
  19. 'Age'
  20. 'Sex'
  21. 'Species'
  22. 'Region'
  23. 'ClustersI200'
  24. 'ClustersH200'
  25. 'logNFrags'
  26. 'Celltype1'
  27. 'ClustersX60'
  28. 'predictedCell_Co'
  29. 'predictedGroup_RNA2ATACCo'
  30. 'predictedScore_RNA2ATACCo'
  1. 'Sample'
  2. 'TSSEnrichment'
  3. 'ReadsInTSS'
  4. 'ReadsInPromoter'
  5. 'ReadsInBlacklist'
  6. 'PromoterRatio'
  7. 'PassQC'
  8. 'NucleosomeRatio'
  9. 'nMultiFrags'
  10. 'nMonoFrags'
  11. 'nFrags'
  12. 'nDiFrags'
  13. 'DoubletScore'
  14. 'DoubletEnrichment'
  15. 'BlacklistRatio'
  16. 'Sample_ID'
  17. 'Date.nuclei.prep'
  18. 'Biological.rep'
  19. 'Age'
  20. 'Sex'
  21. 'Species'
  22. 'Region'
  23. 'ClustersI200'
  24. 'ClustersH200'
  25. 'logNFrags'
  26. 'Celltype1'
  27. 'ClustersX60'
  28. 'predictedCell_Co'
  29. 'predictedGroup_RNA2ATACCo'
  30. 'predictedScore_RNA2ATACCo'
In [16]:
#check to see if this merge is working properly
columns = names(df_Glia)
df_label = rbind(df_Neuron[,columns],df_Glia[,columns] )
df_label
dim(df_label)
print(getCellColData(proj))

DataFrame with 75955 rows and 30 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA Mouse_DH_SEA2253A58        14.164
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT Mouse_DH_SEA2253A58        15.910
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG Mouse_DH_SEA2253A58        10.861
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG Mouse_DH_SEA2253A58        17.269
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC Mouse_DH_SEA2253A58        18.201
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC Mouse_DH_SEA2253A69        10.693
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG Mouse_DH_SEA2253A69        17.317
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA Mouse_DH_SEA2253A69        11.675
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT Mouse_DH_SEA2253A69        13.119
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG Mouse_DH_SEA2253A69        30.716
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       6788           24952
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       6990           25965
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       4355           16936
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       7718           27008
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       7445           25859
...                                         ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        243            1056
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        446            1576
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        283            1280
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        318            1255
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        667            2131
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA             3777      0.155608         1
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT             3880      0.176551         1
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG             3561      0.115299         1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG             4147      0.185642         1
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC             5408      0.183335         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC              138      0.156816         1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG              268      0.235505         1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA              208      0.194057         1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT              164      0.192780         1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG              170      0.332449         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA        0.919877        6002      41761
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT        1.359279        8719      31168
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        1.350735        7665      31243
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG        0.868773        4609      38925
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC        0.883453        5368      37444
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        9.203030         721        330
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        1.428157         438       1378
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        4.676420         681        581
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        7.410853         707        387
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        0.510368         150       2122
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     80176     32413            0
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     73534     33647            0
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     73444     34536            0
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     72742     29208            0
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     70524     27712            0
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC      3367      2316            0
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG      3346      1530            0
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA      3298      2036            0
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT      3255      2161            0
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG      3205       933            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         0.3000000      0.0235544
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT         0.0666667      0.0263824
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         0.2666667      0.0242430
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         0.4000000      0.0285049
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         0.5666667      0.0383416
...                                                ...            ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         0.2444444      0.0204930
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         0.0222222      0.0400478
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         0.0000000      0.0315343
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         0.3555556      0.0251920
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         0.6444444      0.0265211
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC       Mouse  DorsalHorn           C9
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG       Mouse  DorsalHorn          C24
                                     ClustersH200 logNFrags   Celltype1
                                      <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C14   4.90404     midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C11   4.86649     midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG          C11   4.86596    Inh-Cdh3
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG          C11   4.86179     midVent
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC          C11   4.84834    Inh-Rorb
...                                           ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC          C24   3.52724     Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG           C1   3.52453   Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA           C1   3.51825   Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT          C24   3.51255     Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG          C24   3.50583     Oligo.1
                                     ClustersX60 predictedCell_Co
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C6              564
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C9             2290
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         C12                2
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         C10             4496
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC         C16             1570
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         C16             9822
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         C20             6548
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         C20            10602
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         C16             9822
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         C19             2160
                                     predictedGroup_RNA2ATACCo
                                                   <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                    midVen
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                    midVen
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                     GABA1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                    midVen
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                     GABA4
...                                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                   Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                 Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                 Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                   Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                   Oligo.1
                                     predictedScore_RNA2ATACCo
                                                     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                  0.893739
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                  0.805882
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                  0.931563
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                  0.564452
Mouse_DH_SEA2253A58#GCTTTAGGATCGTAAC                  0.413136
...                                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                  0.925414
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                  1.000000
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                  0.981841
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                  0.968747
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                  0.860995
  1. 75955
  2. 30
DataFrame with 75955 rows and 29 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA Mouse_DH_SEA2253A58        14.164
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT Mouse_DH_SEA2253A58        15.910
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG Mouse_DH_SEA2253A58        10.861
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG Mouse_DH_SEA2253A58        17.269
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC Mouse_DH_SEA2253A58        25.310
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC Mouse_DH_SEA2253A69        10.693
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG Mouse_DH_SEA2253A69        17.317
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA Mouse_DH_SEA2253A69        11.675
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT Mouse_DH_SEA2253A69        13.119
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG Mouse_DH_SEA2253A69        30.716
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       6788           24952
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       6990           25965
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       4355           16936
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       7718           27008
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC      13881           45719
...                                         ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        243            1056
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        446            1576
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        283            1280
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        318            1255
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        667            2131
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA             3777      0.155608         1
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT             3880      0.176551         1
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG             3561      0.115299         1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG             4147      0.185642         1
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC             3927      0.314804         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC              138      0.156816         1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG              268      0.235505         1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA              208      0.194057         1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT              164      0.192780         1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG              170      0.332449         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA        0.919877        6002      41761
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT        1.359279        8719      31168
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        1.350735        7665      31243
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG        0.868773        4609      38925
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC        0.627884        6400      44607
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        9.203030         721        330
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        1.428157         438       1378
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        4.676420         681        581
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        7.410853         707        387
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        0.510368         150       2122
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     80176     32413            0
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     73534     33647            0
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     73444     34536            0
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     72742     29208            0
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     72615     21608            0
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC      3367      2316            0
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG      3346      1530            0
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA      3298      2036            0
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT      3255      2161            0
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG      3205       933            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         0.3000000      0.0235544
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT         0.0666667      0.0263824
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         0.2666667      0.0242430
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         0.4000000      0.0285049
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC         0.7666667      0.0270399
...                                                ...            ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         0.2444444      0.0204930
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         0.0222222      0.0400478
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         0.0000000      0.0315343
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         0.3555556      0.0251920
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         0.6444444      0.0265211
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC       Mouse  DorsalHorn          C20
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG       Mouse  DorsalHorn          C24
                                     ClustersH200 logNFrags       Celltype1
                                      <character> <numeric>     <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C14   4.90404         midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C11   4.86649         midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG          C11   4.86596        Inh-Cdh3
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG          C11   4.86179         midVent
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C20   4.86103 Ependymal.cells
...                                           ...       ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC          C24   3.52724         Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG           C1   3.52453       Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA           C1   3.51825       Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT          C24   3.51255         Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG          C24   3.50583         Oligo.1
                                     predictedGroup_RNA2ATACCo ReadsInPeaks
                                                   <character>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                    midVen        63912
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                    midVen        67120
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                     GABA1        52386
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                    midVen        66616
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC           Ependymal.cells        98301
...                                                        ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                   Oligo.1         2783
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                 Microglia         3402
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                 Microglia         2753
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                   Oligo.1         3079
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                   Oligo.1         4068
                                          FRIP
                                     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  0.398623
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  0.456443
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  0.356678
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  0.457930
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  0.676930
...                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  0.413399
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  0.508824
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  0.417374
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  0.472965
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  0.634831
In [ ]:
proj <- addCellColData(ArchRProj = proj, data = df_label$predictedGroup_RNA2ATACCo,
    cells = rownames(df_label), name = "predictedGroup_RNA2ATACCo", force = TRUE)
proj <- addCellColData(ArchRProj = proj, data = df_label$Celltype1,
    cells = rownames(df_label), name = "Celltype1", force = TRUE)
In [18]:
proj
getCellColData(proj)

           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
    


class: ArchRProject 
outputDirectory: /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC 
samples(12): Mouse_DH_SEA2253A58 Mouse_DH_SEA2253A59 ...
  Mouse_DH_SEA2253A68 Mouse_DH_SEA2253A69
sampleColData names(8): ArrowFiles Sample_ID ... Species Region
cellColData names(29): Sample TSSEnrichment ... ReadsInPeaks FRIP
numberOfCells(1): 75955
medianTSS(1): 23.946
medianFrags(1): 16376
DataFrame with 75955 rows and 29 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA Mouse_DH_SEA2253A58        14.164
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT Mouse_DH_SEA2253A58        15.910
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG Mouse_DH_SEA2253A58        10.861
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG Mouse_DH_SEA2253A58        17.269
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC Mouse_DH_SEA2253A58        25.310
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC Mouse_DH_SEA2253A69        10.693
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG Mouse_DH_SEA2253A69        17.317
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA Mouse_DH_SEA2253A69        11.675
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT Mouse_DH_SEA2253A69        13.119
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG Mouse_DH_SEA2253A69        30.716
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       6788           24952
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       6990           25965
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       4355           16936
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       7718           27008
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC      13881           45719
...                                         ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        243            1056
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        446            1576
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        283            1280
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        318            1255
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        667            2131
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA             3777      0.155608         1
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT             3880      0.176551         1
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG             3561      0.115299         1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG             4147      0.185642         1
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC             3927      0.314804         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC              138      0.156816         1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG              268      0.235505         1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA              208      0.194057         1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT              164      0.192780         1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG              170      0.332449         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA        0.919877        6002      41761
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT        1.359279        8719      31168
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        1.350735        7665      31243
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG        0.868773        4609      38925
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC        0.627884        6400      44607
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        9.203030         721        330
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        1.428157         438       1378
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        4.676420         681        581
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        7.410853         707        387
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        0.510368         150       2122
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     80176     32413            0
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     73534     33647            0
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     73444     34536            0
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     72742     29208            0
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     72615     21608            0
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC      3367      2316            0
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG      3346      1530            0
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA      3298      2036            0
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT      3255      2161            0
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG      3205       933            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         0.3000000      0.0235544
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT         0.0666667      0.0263824
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         0.2666667      0.0242430
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         0.4000000      0.0285049
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC         0.7666667      0.0270399
...                                                ...            ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         0.2444444      0.0204930
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         0.0222222      0.0400478
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         0.0000000      0.0315343
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         0.3555556      0.0251920
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         0.6444444      0.0265211
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC       Mouse  DorsalHorn          C20
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG       Mouse  DorsalHorn          C24
                                     ClustersH200 logNFrags       Celltype1
                                      <character> <numeric>     <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C14   4.90404         midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C11   4.86649         midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG          C11   4.86596        Inh-Cdh3
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG          C11   4.86179         midVent
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C20   4.86103 Ependymal.cells
...                                           ...       ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC          C24   3.52724         Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG           C1   3.52453       Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA           C1   3.51825       Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT          C24   3.51255         Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG          C24   3.50583         Oligo.1
                                     predictedGroup_RNA2ATACCo ReadsInPeaks
                                                   <character>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                    midVen        63912
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                    midVen        67120
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                     GABA1        52386
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                    midVen        66616
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC           Ependymal.cells        98301
...                                                        ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                   Oligo.1         2783
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                 Microglia         3402
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                 Microglia         2753
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                   Oligo.1         3079
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                   Oligo.1         4068
                                          FRIP
                                     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  0.398623
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  0.456443
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  0.356678
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  0.457930
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  0.676930
...                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  0.413399
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  0.508824
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  0.417374
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  0.472965
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  0.634831
In [17]:
table(proj$Celltype1)

    Astrocyte.1     Astrocyte.2     Endothelial Ependymal.cells        Ex-Cpne4 
           2417           10926             788             951            1330 
         Ex-Maf        Ex-Prkcg         Ex-Reln        Ex-Rreb1         Ex-Sox5 
           2134             523            3426               5            5592 
    Inh-Adamts5        Inh-Cdh3         Inh-Npy        Inh-Pdyn        Inh-Rorb 
           2296            1073             405            1308            1105 
       Meninges       Microglia         midVent           Mural         Oligo.1 
              2            2328            1394             736           32624 
        Oligo.2             OPC 
           1244            3348
In [20]:
## subset to cells with integrated labels
idxPass <- which(!is.na(proj$predictedGroup_RNA2ATACCo) & 
                 proj$predictedGroup_RNA2ATACCo %ni% c('Drop', 'NA.', 'TH')) # too few cluster

#impute weights dropped, 'cell-x-cell' matrix
cellsPass <- proj$cellNames[idxPass]
proj = subsetCells(ArchRProj = proj, cellNames = cellsPass)
proj
getCellColData(proj)

           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
    


class: ArchRProject 
outputDirectory: /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC 
samples(12): Mouse_DH_SEA2253A58 Mouse_DH_SEA2253A59 ...
  Mouse_DH_SEA2253A68 Mouse_DH_SEA2253A69
sampleColData names(8): ArrowFiles Sample_ID ... Species Region
cellColData names(29): Sample TSSEnrichment ... ReadsInPeaks FRIP
numberOfCells(1): 75955
medianTSS(1): 23.946
medianFrags(1): 16376
DataFrame with 75955 rows and 29 columns
                                                  Sample TSSEnrichment
                                             <character>     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA Mouse_DH_SEA2253A58        14.164
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT Mouse_DH_SEA2253A58        15.910
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG Mouse_DH_SEA2253A58        10.861
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG Mouse_DH_SEA2253A58        17.269
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC Mouse_DH_SEA2253A58        25.310
...                                                  ...           ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC Mouse_DH_SEA2253A69        10.693
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG Mouse_DH_SEA2253A69        17.317
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA Mouse_DH_SEA2253A69        11.675
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT Mouse_DH_SEA2253A69        13.119
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG Mouse_DH_SEA2253A69        30.716
                                     ReadsInTSS ReadsInPromoter
                                      <numeric>       <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       6788           24952
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       6990           25965
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       4355           16936
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       7718           27008
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC      13881           45719
...                                         ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        243            1056
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        446            1576
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        283            1280
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        318            1255
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        667            2131
                                     ReadsInBlacklist PromoterRatio    PassQC
                                            <numeric>     <numeric> <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA             3777      0.155608         1
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT             3880      0.176551         1
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG             3561      0.115299         1
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG             4147      0.185642         1
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC             3927      0.314804         1
...                                               ...           ...       ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC              138      0.156816         1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG              268      0.235505         1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA              208      0.194057         1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT              164      0.192780         1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG              170      0.332449         1
                                     NucleosomeRatio nMultiFrags nMonoFrags
                                           <numeric>   <numeric>  <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA        0.919877        6002      41761
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT        1.359279        8719      31168
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG        1.350735        7665      31243
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG        0.868773        4609      38925
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC        0.627884        6400      44607
...                                              ...         ...        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC        9.203030         721        330
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG        1.428157         438       1378
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA        4.676420         681        581
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT        7.410853         707        387
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG        0.510368         150       2122
                                        nFrags  nDiFrags DoubletScore
                                     <numeric> <numeric>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     80176     32413            0
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     73534     33647            0
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     73444     34536            0
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     72742     29208            0
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     72615     21608            0
...                                        ...       ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC      3367      2316            0
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG      3346      1530            0
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA      3298      2036            0
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT      3255      2161            0
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG      3205       933            0
                                     DoubletEnrichment BlacklistRatio
                                             <numeric>      <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA         0.3000000      0.0235544
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT         0.0666667      0.0263824
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG         0.2666667      0.0242430
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG         0.4000000      0.0285049
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC         0.7666667      0.0270399
...                                                ...            ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC         0.2444444      0.0204930
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG         0.0222222      0.0400478
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA         0.0000000      0.0315343
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT         0.3555556      0.0251920
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG         0.6444444      0.0265211
                                       Sample_ID Date.nuclei.prep
                                     <character>      <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  SEA2253A58       2022-02-15
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  SEA2253A58       2022-02-15
...                                          ...              ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  SEA2253A69       2022-02-23
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  SEA2253A69       2022-02-23
                                     Biological.rep       Age         Sex
                                        <character> <numeric> <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG     Mouse01-10  0.134247    F/M pool
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC     Mouse01-10  0.134247    F/M pool
...                                             ...       ...         ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT     Mouse11-20  0.156164    F/M pool
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG     Mouse11-20  0.156164    F/M pool
                                         Species      Region ClustersI200
                                     <character> <character>  <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG       Mouse  DorsalHorn          C11
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC       Mouse  DorsalHorn          C20
...                                          ...         ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA       Mouse  DorsalHorn           C1
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT       Mouse  DorsalHorn          C24
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG       Mouse  DorsalHorn          C24
                                     ClustersH200 logNFrags       Celltype1
                                      <character> <numeric>     <character>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA          C14   4.90404         midVent
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT          C11   4.86649         midVent
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG          C11   4.86596        Inh-Cdh3
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG          C11   4.86179         midVent
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC          C20   4.86103 Ependymal.cells
...                                           ...       ...             ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC          C24   3.52724         Oligo.1
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG           C1   3.52453       Microglia
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA           C1   3.51825       Microglia
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT          C24   3.51255         Oligo.1
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG          C24   3.50583         Oligo.1
                                     predictedGroup_RNA2ATACCo ReadsInPeaks
                                                   <character>    <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA                    midVen        63912
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT                    midVen        67120
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG                     GABA1        52386
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG                    midVen        66616
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC           Ependymal.cells        98301
...                                                        ...          ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC                   Oligo.1         2783
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG                 Microglia         3402
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA                 Microglia         2753
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT                   Oligo.1         3079
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG                   Oligo.1         4068
                                          FRIP
                                     <numeric>
Mouse_DH_SEA2253A58#TTACACACTTCGTCAA  0.398623
Mouse_DH_SEA2253A58#GCGTGCTGAAGCAGGT  0.456443
Mouse_DH_SEA2253A58#CGACCAGACTTCTGAG  0.356678
Mouse_DH_SEA2253A58#TCAGTCCTGAATACAG  0.457930
Mouse_DH_SEA2253A58#GAGGGATACCTGGCAC  0.676930
...                                        ...
Mouse_DH_SEA2253A69#GACTACCCTGGCCATC  0.413399
Mouse_DH_SEA2253A69#GACAAGGTGCTGAGAG  0.508824
Mouse_DH_SEA2253A69#GACCTATGAGGTGCAA  0.417374
Mouse_DH_SEA2253A69#GACTACCCTTCGGGCT  0.472965
Mouse_DH_SEA2253A69#TAAAAAAAAAAAAAAG  0.634831
In [12]:
## make UMAP plots
p1 <- plotEmbedding(ArchRProj = proj, colorBy = "cellColData", 
                    name = "Sample", embedding = "UMAPH200")

p2 <- plotEmbedding(proj, colorBy = "cellColData", 
                    name = "Celltype1", embedding = "UMAPH200")

p3 <- plotEmbedding(proj, colorBy = "cellColData", 
                    name = "predictedGroup_RNA2ATACCo", embedding = "UMAPH200")


ggAlignPlots(p1, p2, p3,  type = "h")

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e487184d7-Date-2022-10-21_Time-09-12-03.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = cellColData

Plotting Embedding

1 
WARNING: Error found with Cairo installation. Continuing without rasterization.



ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e487184d7-Date-2022-10-21_Time-09-12-03.log

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e436b942e-Date-2022-10-21_Time-09-12-15.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = cellColData

Plotting Embedding

1 
WARNING: Error found with Cairo installation. Continuing without rasterization.

Length of unique values greater than palette, interpolating..



ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e436b942e-Date-2022-10-21_Time-09-12-15.log

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e5fc70e2c-Date-2022-10-21_Time-09-12-17.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = cellColData

Plotting Embedding

1 
WARNING: Error found with Cairo installation. Continuing without rasterization.

Length of unique values greater than palette, interpolating..



ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e5fc70e2c-Date-2022-10-21_Time-09-12-17.log
In [19]:
## Neuron vs. Glia markers
markerGenes1  <- c('SRRM3',#Neurons
                   'MYT1L',#Neurons
                   'RBFOX3'#Neurons
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e6bcd96e4-Date-2022-10-21_Time-10-08-59.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:09:01 : 



Plotting Embedding

1 
2 
3 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e6bcd96e4-Date-2022-10-21_Time-10-08-59.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [20]:
## Neuron vs. Glia markers
markerGenes1  <- c('ITGB4',#Astrocyte1
                   'GFAP',#Astrocyte1
                   'SLC7A10',#Astrocyte2
                   'PDZRN4'#Astrocyte2
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e56df83b1-Date-2022-10-21_Time-10-10-16.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:10:19 : 



Plotting Embedding

1 
2 
3 
4 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e56df83b1-Date-2022-10-21_Time-10-10-16.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [36]:
## Neuron vs. Glia markers
markerGenes1  <- c('RFX2'#Ependymal 
#                    'DNAH12'#Ependymal 
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e227ae1be-Date-2022-10-21_Time-10-22-57.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:22:58 : 



Plotting Embedding

1 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e227ae1be-Date-2022-10-21_Time-10-22-57.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”

Error in x + guides(color = FALSE, fill = FALSE): non-numeric argument to binary operator
Traceback:

1. lapply(p, function(x) {
 .     x + guides(color = FALSE, fill = FALSE) + theme_ArchR(baseSize = 6.5) + 
 .         theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) + theme(axis.text.x = element_blank(), 
 .         axis.ticks.x = element_blank(), axis.text.y = element_blank(), 
 .         axis.ticks.y = element_blank())
 . })
2. lapply(p, function(x) {
 .     x + guides(color = FALSE, fill = FALSE) + theme_ArchR(baseSize = 6.5) + 
 .         theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) + theme(axis.text.x = element_blank(), 
 .         axis.ticks.x = element_blank(), axis.text.y = element_blank(), 
 .         axis.ticks.y = element_blank())
 . })
3. FUN(X[[i]], ...)
In [35]:
## Neuron vs. Glia markers
markerGenes1  <- c('LAMA2',#Meninges
                   'BICC1'#Meninges
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e1111f435-Date-2022-10-21_Time-10-22-36.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:22:37 : 



Plotting Embedding

1 
2 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e1111f435-Date-2022-10-21_Time-10-22-36.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [34]:
## Neuron vs. Glia markers
markerGenes1  <- c('MYO1F',#Microglia
                   'PALD1' #Microglia
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e28130342-Date-2022-10-21_Time-10-22-07.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:22:10 : 



Plotting Embedding

1 
2 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e28130342-Date-2022-10-21_Time-10-22-07.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [33]:
## Neuron vs. Glia markers
markerGenes1  <- c('QDPR',#Oligo1
                   'DPY19L1'#Oligo2
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7ede42222-Date-2022-10-21_Time-10-21-37.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:21:38 : 



Plotting Embedding

1 
2 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7ede42222-Date-2022-10-21_Time-10-21-37.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [32]:
## Neuron vs. Glia markers
markerGenes1  <- c('MEGF11',#OPC
                   'TNR'#OPC
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e374b11be-Date-2022-10-21_Time-10-21-08.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:21:11 : 



Plotting Embedding

1 
2 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e374b11be-Date-2022-10-21_Time-10-21-08.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [25]:
## Neuron vs. Glia markers
markerGenes1  <- c('MPZ',#Schwann
                   'PMP22'#Schwann
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e2195493-Date-2022-10-21_Time-10-13-35.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:13:38 : 



Plotting Embedding

1 
2 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e2195493-Date-2022-10-21_Time-10-13-35.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [26]:
## Excitatory vs. Inhibitory markers
markerGenes1  <- c('SLC17A6','FSTL4', # Excitatory 
                   'SLC32A1','PAX2' # Inhibitory
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e918fa13-Date-2022-10-21_Time-10-14-07.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:14:10 : 



Plotting Embedding

1 
2 
3 
4 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e918fa13-Date-2022-10-21_Time-10-14-07.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [27]:
## Marker Genes for differentiation of Excitatory Neurons
markerGenes1  <- c('GFRA1',
                   'CRHR2',
                   'COL13A1',
                   'NMUR2',
#                    'TAC3',
                   'NMU',
                   'COL5A2',
                   'GHR',
                   'COL24A1',
                   'NMBR',
                   'TAC1',
#                    'ANOS1',
                   'FSTL4',
                   'ADARB2',
                   'MAF',
                   'ST8SIA6',
                   'MAFA',
                   'NTNG1',
                   'ADAMTS16',
                   'TLL2',
                   'OTOGL'
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e7efe2284-Date-2022-10-21_Time-10-15-05.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:15:08 : 



Plotting Embedding

1 
2 
3 
4 
5 
6 
7 
8 
9 
10 
11 
12 
13 
14 
15 
16 
17 
18 
19 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e7efe2284-Date-2022-10-21_Time-10-15-05.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [28]:
## Marker Genes for differentiation of Inhibitory Nuerons
markerGenes1  <- c('MASP1',
                   'RREB1',
                   'NPY',
                   'MET',
                   'PTN',
                   'PDYN'
                  )

p <- plotEmbedding( ArchRProj = proj, colorBy = "GeneScoreMatrix", 
                    name = markerGenes1, embedding = "UMAPH200")
p <- lapply(p, function(x){
  x + guides(color = FALSE, fill = FALSE) + 
    theme_ArchR(baseSize = 6.5) + theme(plot.margin = unit(c(0, 0, 0, 0), "cm")) +
    theme(  axis.text.x=element_blank(),  axis.ticks.x=element_blank(), 
            axis.text.y=element_blank(),  axis.ticks.y=element_blank())
})
do.call(cowplot::plot_grid, c(list(ncol = 3),p))

Getting ImputeWeights

No imputeWeights found, returning NULL

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e4c3c03a7-Date-2022-10-21_Time-10-17-19.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = GeneScoreMatrix

Getting Matrix Values...

2022-10-21 10:17:20 : 



Plotting Embedding

1 
2 
3 
4 
5 
6 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e4c3c03a7-Date-2022-10-21_Time-10-17-19.log

Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
Warning message:
“`guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.”
In [29]:
## make UMAP plots of
p1 <- plotEmbedding(ArchRProj = proj, colorBy = "cellColData", 
                    name = "ClustersH200", embedding = "UMAPH200")

p2 <- plotEmbedding(ArchRProj = proj, colorBy = "cellColData", 
                    name = "DoubletEnrichment", embedding = "UMAPH200")

ggAlignPlots(p1, p2, type = "h")

proj$logNFrags = log10(proj$nFrags)

p3 <- plotEmbedding(ArchRProj = proj, colorBy = "cellColData", 
                    name = "logNFrags", embedding = "UMAPH200")

ggAlignPlots(p1, p3, type = "h")

p4 <- plotEmbedding(ArchRProj = proj, colorBy = "cellColData", 
                    name = "TSSEnrichment", embedding = "UMAPH200")

ggAlignPlots(p1, p4, type = "h")

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e842a4ec-Date-2022-10-21_Time-10-18-11.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = cellColData

Plotting Embedding

1 
WARNING: Error found with Cairo installation. Continuing without rasterization.



ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e842a4ec-Date-2022-10-21_Time-10-18-11.log

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e51d6d3b8-Date-2022-10-21_Time-10-18-12.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = cellColData

Plotting Embedding

1 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e51d6d3b8-Date-2022-10-21_Time-10-18-12.log

ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7ef066510-Date-2022-10-21_Time-10-18-19.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = cellColData

Plotting Embedding

1 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7ef066510-Date-2022-10-21_Time-10-18-19.log


ArchR logging to : ArchRLogs/ArchR-plotEmbedding-44b7e27ef7ad6-Date-2022-10-21_Time-10-18-26.log
If there is an issue, please report to github with logFile!

Getting UMAP Embedding

ColorBy = cellColData

Plotting Embedding

1 


ArchR logging successful to : ArchRLogs/ArchR-plotEmbedding-44b7e27ef7ad6-Date-2022-10-21_Time-10-18-26.log
In [31]:
proj = saveArchRProject(proj)

Saving ArchRProject...

Loading ArchRProject...

Successfully loaded ArchRProject!


                                                   / |
                                                 /    \
            .                                  /      |.
            \\\                              /        |.
              \\\                          /           `|.
                \\\                      /              |.
                  \                    /                |\
                  \\#####\           /                  ||
                ==###########>      /                   ||
                 \\##==......\    /                     ||
            ______ =       =|__ /__                     ||      \\\
        ,--' ,----`-,__ ___/'  --,-`-===================##========>
       \               '        ##_______ _____ ,--,__,=##,__   ///
        ,    __==    ___,-,__,--'#'  ==='      `-'    | ##,-/
        -,____,---'       \\####\\________________,--\\_##,/
           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
In [5]:
library(BSgenome.Mmusculus.UCSC.mm10)

Loading required package: BSgenome

Loading required package: Biostrings

Loading required package: XVector


Attaching package: ‘XVector’


The following object is masked from ‘package:purrr’:

    compact


The following object is masked from ‘package:plyr’:

    compact



Attaching package: ‘Biostrings’


The following object is masked from ‘package:grid’:

    pattern


The following object is masked from ‘package:base’:

    strsplit


Loading required package: rtracklayer

Call peaks using integrated clusters¶

In [ ]:
# make group coverage, call peaks, and 
proj<-addGroupCoverages(proj, groupBy="predictedGroup_RNA2ATACCo", 
                        minReplicates = 5, maxReplicates = 11, force = TRUE,
                        minCells = 40, maxCells = 1000)

Loading required package: BSgenome

Loading required package: Biostrings

Loading required package: XVector


Attaching package: ‘XVector’


The following object is masked from ‘package:purrr’:

    compact


The following object is masked from ‘package:plyr’:

    compact



Attaching package: ‘Biostrings’


The following object is masked from ‘package:grid’:

    pattern


The following object is masked from ‘package:base’:

    strsplit


Loading required package: rtracklayer

ArchR logging to : ArchRLogs/ArchR-addGroupCoverages-b6d2e69ca09-Date-2022-10-17_Time-21-58-32.log
If there is an issue, please report to github with logFile!

Astrocyte.1 (1 of 25) : CellGroups N = 11

Astrocyte.2 (2 of 25) : CellGroups N = 11

Ependymal.cells (3 of 25) : CellGroups N = 11

GABA1 (4 of 25) : CellGroups N = 11

GABA2 (5 of 25) : CellGroups N = 11

GABA3 (6 of 25) : CellGroups N = 5

GABA4 (7 of 25) : CellGroups N = 11

GABA5 (8 of 25) : CellGroups N = 11

GLUT1 (9 of 25) : CellGroups N = 10

GLUT2 (10 of 25) : CellGroups N = 11

GLUT3 (11 of 25) : CellGroups N = 11

GLUT4 (12 of 25) : CellGroups N = 11

GLUT5 (13 of 25) : CellGroups N = 5

GLUT6 (14 of 25) : CellGroups N = 11

GLUT7 (15 of 25) : CellGroups N = 11

GLUT8 (16 of 25) : CellGroups N = 11

GLUT9 (17 of 25) : CellGroups N = 5

GLUT10 (18 of 25) : CellGroups N = 5

GLUT11 (19 of 25) : CellGroups N = 5

Meninges (20 of 25) : CellGroups N = 11

Microglia (21 of 25) : CellGroups N = 11

midVen (22 of 25) : CellGroups N = 11

Oligo.1 (23 of 25) : CellGroups N = 11

Oligo.2 (24 of 25) : CellGroups N = 11

OPC (25 of 25) : CellGroups N = 11

2022-10-17 21:58:54 : Creating Coverage Files!, 0.363 mins elapsed.

2022-10-17 21:58:54 : Batch Execution w/ safelapply!, 0.363 mins elapsed.

2022-10-17 21:58:54 : Group Astrocyte.1._.Mouse_DH_SEA2253A60 (1 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 0.363 mins elapsed.

Number of Cells = 293

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:00:09 : Group Astrocyte.1._.Mouse_DH_SEA2253A61 (2 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 1.616 mins elapsed.

Number of Cells = 269

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:01:29 : Group Astrocyte.1._.Mouse_DH_SEA2253A58 (3 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 2.962 mins elapsed.

Number of Cells = 261

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:02:39 : Group Astrocyte.1._.Mouse_DH_SEA2253A62 (4 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 4.122 mins elapsed.

Number of Cells = 261

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:03:56 : Group Astrocyte.1._.Mouse_DH_SEA2253A59 (5 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 5.404 mins elapsed.

Number of Cells = 259

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:05:07 : Group Astrocyte.1._.Mouse_DH_SEA2253A63 (6 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 6.59 mins elapsed.

Number of Cells = 250

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:06:18 : Group Astrocyte.1._.Mouse_DH_SEA2253A64 (7 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 7.777 mins elapsed.

Number of Cells = 152

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:07:31 : Group Astrocyte.1._.Mouse_DH_SEA2253A66 (8 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 8.986 mins elapsed.

Number of Cells = 148

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:08:46 : Group Astrocyte.1._.Mouse_DH_SEA2253A68 (9 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 10.236 mins elapsed.

Number of Cells = 144

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:09:56 : Group Astrocyte.1._.Mouse_DH_SEA2253A67 (10 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 11.408 mins elapsed.

Number of Cells = 136

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:11:02 : Group Astrocyte.1._.Mouse_DH_SEA2253A65 (11 of 244) : Creating Group Coverage File : Astrocyte.1._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 12.5 mins elapsed.

Number of Cells = 122

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:12:14 : Group Astrocyte.2._.Mouse_DH_SEA2253A63 (12 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 13.709 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:13:42 : Group Astrocyte.2._.Mouse_DH_SEA2253A59 (13 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 15.175 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:15:20 : Group Astrocyte.2._.Mouse_DH_SEA2253A62 (14 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 16.811 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:16:50 : Group Astrocyte.2._.Mouse_DH_SEA2253A60 (15 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 18.312 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:18:20 : Group Astrocyte.2._.Mouse_DH_SEA2253A58 (16 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 19.808 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:19:57 : Group Astrocyte.2._.Mouse_DH_SEA2253A61 (17 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 21.417 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:21:43 : Group Astrocyte.2._.Mouse_DH_SEA2253A66 (18 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 23.187 mins elapsed.

Number of Cells = 728

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:23:24 : Group Astrocyte.2._.Mouse_DH_SEA2253A67 (19 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 24.867 mins elapsed.

Number of Cells = 698

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:24:57 : Group Astrocyte.2._.Mouse_DH_SEA2253A64 (20 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 26.424 mins elapsed.

Number of Cells = 695

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:26:21 : Group Astrocyte.2._.Mouse_DH_SEA2253A65 (21 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 27.817 mins elapsed.

Number of Cells = 694

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:27:56 : Group Astrocyte.2._.Mouse_DH_SEA2253A68 (22 of 244) : Creating Group Coverage File : Astrocyte.2._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 29.412 mins elapsed.

Number of Cells = 677

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:29:35 : Group Ependymal.cells._.Mouse_DH_SEA2253A59 (23 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 31.05 mins elapsed.

Number of Cells = 114

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:30:50 : Group Ependymal.cells._.Mouse_DH_SEA2253A62 (24 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 32.311 mins elapsed.

Number of Cells = 102

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:32:07 : Group Ependymal.cells._.Mouse_DH_SEA2253A58 (25 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 33.585 mins elapsed.

Number of Cells = 99

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:33:18 : Group Ependymal.cells._.Mouse_DH_SEA2253A61 (26 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 34.764 mins elapsed.

Number of Cells = 92

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:34:40 : Group Ependymal.cells._.Mouse_DH_SEA2253A60 (27 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 36.133 mins elapsed.

Number of Cells = 90

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:35:54 : Group Ependymal.cells._.Mouse_DH_SEA2253A63 (28 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 37.367 mins elapsed.

Number of Cells = 87

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:37:03 : Group Ependymal.cells._.Mouse_DH_SEA2253A69 (29 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 38.516 mins elapsed.

Number of Cells = 80

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:38:03 : Group Ependymal.cells._.Mouse_DH_SEA2253A66 (30 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 39.521 mins elapsed.

Number of Cells = 63

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:39:17 : Group Ependymal.cells._.Mouse_DH_SEA2253A67 (31 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 40.757 mins elapsed.

Number of Cells = 62

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:40:18 : Group Ependymal.cells._.Mouse_DH_SEA2253A64 (32 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 41.766 mins elapsed.

Number of Cells = 60

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:41:32 : Group Ependymal.cells._.Mouse_DH_SEA2253A68 (33 of 244) : Creating Group Coverage File : Ependymal.cells._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 42.999 mins elapsed.

Number of Cells = 56

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:42:30 : Group GABA1._.Mouse_DH_SEA2253A62 (34 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 43.978 mins elapsed.

Number of Cells = 118

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:43:55 : Group GABA1._.Mouse_DH_SEA2253A60 (35 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 45.39 mins elapsed.

Number of Cells = 118

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:45:12 : Group GABA1._.Mouse_DH_SEA2253A59 (36 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 46.664 mins elapsed.

Number of Cells = 110

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:46:33 : Group GABA1._.Mouse_DH_SEA2253A63 (37 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 48.019 mins elapsed.

Number of Cells = 108

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:47:50 : Group GABA1._.Mouse_DH_SEA2253A58 (38 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 49.31 mins elapsed.

Number of Cells = 96

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:49:07 : Group GABA1._.Mouse_DH_SEA2253A61 (39 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 50.591 mins elapsed.

Number of Cells = 94

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:50:23 : Group GABA1._.Mouse_DH_SEA2253A67 (40 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 51.85 mins elapsed.

Number of Cells = 83

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:51:35 : Group GABA1._.Mouse_DH_SEA2253A66 (41 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 53.052 mins elapsed.

Number of Cells = 81

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:52:51 : Group GABA1._.Mouse_DH_SEA2253A69 (42 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 54.313 mins elapsed.

Number of Cells = 75

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:54:08 : Group GABA1._.Mouse_DH_SEA2253A65 (43 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 55.608 mins elapsed.

Number of Cells = 69

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:55:23 : Group GABA1._.Mouse_DH_SEA2253A68 (44 of 244) : Creating Group Coverage File : GABA1._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 56.86 mins elapsed.

Number of Cells = 64

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:56:28 : Group GABA2._.Mouse_DH_SEA2253A60 (45 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 57.942 mins elapsed.

Number of Cells = 160

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:57:49 : Group GABA2._.Mouse_DH_SEA2253A61 (46 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 59.296 mins elapsed.

Number of Cells = 157

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 22:59:11 : Group GABA2._.Mouse_DH_SEA2253A63 (47 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 60.658 mins elapsed.

Number of Cells = 155

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:00:21 : Group GABA2._.Mouse_DH_SEA2253A62 (48 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 61.816 mins elapsed.

Number of Cells = 153

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:01:46 : Group GABA2._.Mouse_DH_SEA2253A58 (49 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 63.238 mins elapsed.

Number of Cells = 148

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:02:57 : Group GABA2._.Mouse_DH_SEA2253A59 (50 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 64.415 mins elapsed.

Number of Cells = 146

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:04:12 : Group GABA2._.Mouse_DH_SEA2253A64 (51 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 65.669 mins elapsed.

Number of Cells = 129

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:05:28 : Group GABA2._.Mouse_DH_SEA2253A65 (52 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 66.936 mins elapsed.

Number of Cells = 123

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:06:41 : Group GABA2._.Mouse_DH_SEA2253A67 (53 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 68.148 mins elapsed.

Number of Cells = 122

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:08:30 : Group GABA2._.Mouse_DH_SEA2253A68 (54 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 69.971 mins elapsed.

Number of Cells = 113

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:09:45 : Group GABA2._.Mouse_DH_SEA2253A69 (55 of 244) : Creating Group Coverage File : GABA2._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 71.225 mins elapsed.

Number of Cells = 105

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:11:01 : Group GABA3._.1 (56 of 244) : Creating Group Coverage File : GABA3._.1.insertions.coverage.h5, 72.491 mins elapsed.

Number of Cells = 104

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:19:24 : Group GABA3._.2 (57 of 244) : Creating Group Coverage File : GABA3._.2.insertions.coverage.h5, 80.866 mins elapsed.

Number of Cells = 104

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:28:45 : Group GABA3._.3 (58 of 244) : Creating Group Coverage File : GABA3._.3.insertions.coverage.h5, 90.213 mins elapsed.

Number of Cells = 102

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:36:46 : Group GABA3._.Mouse_DH_SEA2253A62 (59 of 244) : Creating Group Coverage File : GABA3._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 98.235 mins elapsed.

Number of Cells = 48

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:38:07 : Group GABA3._.Mouse_DH_SEA2253A60 (60 of 244) : Creating Group Coverage File : GABA3._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 99.581 mins elapsed.

Number of Cells = 47

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:39:21 : Group GABA4._.Mouse_DH_SEA2253A60 (61 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 100.816 mins elapsed.

Number of Cells = 201

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:40:40 : Group GABA4._.Mouse_DH_SEA2253A59 (62 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 102.146 mins elapsed.

Number of Cells = 197

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:42:07 : Group GABA4._.Mouse_DH_SEA2253A62 (63 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 103.594 mins elapsed.

Number of Cells = 192

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:43:20 : Group GABA4._.Mouse_DH_SEA2253A63 (64 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 104.796 mins elapsed.

Number of Cells = 184

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:44:41 : Group GABA4._.Mouse_DH_SEA2253A58 (65 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 106.158 mins elapsed.

Number of Cells = 156

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:45:59 : Group GABA4._.Mouse_DH_SEA2253A61 (66 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 107.448 mins elapsed.

Number of Cells = 150

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:47:13 : Group GABA4._.Mouse_DH_SEA2253A64 (67 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 108.692 mins elapsed.

Number of Cells = 122

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:48:31 : Group GABA4._.Mouse_DH_SEA2253A67 (68 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 109.985 mins elapsed.

Number of Cells = 121

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:49:46 : Group GABA4._.Mouse_DH_SEA2253A69 (69 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 111.23 mins elapsed.

Number of Cells = 119

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:51:13 : Group GABA4._.Mouse_DH_SEA2253A68 (70 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 112.683 mins elapsed.

Number of Cells = 119

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:52:22 : Group GABA4._.Mouse_DH_SEA2253A66 (71 of 244) : Creating Group Coverage File : GABA4._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 113.837 mins elapsed.

Number of Cells = 118

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:53:35 : Group GABA5._.Mouse_DH_SEA2253A58 (72 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 115.055 mins elapsed.

Number of Cells = 150

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:54:47 : Group GABA5._.Mouse_DH_SEA2253A63 (73 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 116.249 mins elapsed.

Number of Cells = 140

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:55:57 : Group GABA5._.Mouse_DH_SEA2253A61 (74 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 117.425 mins elapsed.

Number of Cells = 136

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:57:19 : Group GABA5._.Mouse_DH_SEA2253A59 (75 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 118.789 mins elapsed.

Number of Cells = 135

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:58:34 : Group GABA5._.Mouse_DH_SEA2253A60 (76 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 120.04 mins elapsed.

Number of Cells = 124

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-17 23:59:55 : Group GABA5._.Mouse_DH_SEA2253A62 (77 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 121.393 mins elapsed.

Number of Cells = 117

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:01:12 : Group GABA5._.Mouse_DH_SEA2253A64 (78 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 122.666 mins elapsed.

Number of Cells = 94

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:02:28 : Group GABA5._.Mouse_DH_SEA2253A65 (79 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 123.934 mins elapsed.

Number of Cells = 93

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:03:42 : Group GABA5._.Mouse_DH_SEA2253A66 (80 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 125.178 mins elapsed.

Number of Cells = 91

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:05:02 : Group GABA5._.Mouse_DH_SEA2253A67 (81 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 126.499 mins elapsed.

Number of Cells = 81

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:06:13 : Group GABA5._.Mouse_DH_SEA2253A68 (82 of 244) : Creating Group Coverage File : GABA5._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 127.68 mins elapsed.

Number of Cells = 77

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:07:32 : Group GLUT1._.Other (83 of 244) : Creating Group Coverage File : GLUT1._.Other.insertions.coverage.h5, 129.003 mins elapsed.

Number of Cells = 107

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:10:11 : Group GLUT1._.Mouse_DH_SEA2253A59 (84 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 131.65 mins elapsed.

Number of Cells = 66

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:11:31 : Group GLUT1._.Mouse_DH_SEA2253A60 (85 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 132.982 mins elapsed.

Number of Cells = 63

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:12:45 : Group GLUT1._.Mouse_DH_SEA2253A61 (86 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 134.219 mins elapsed.

Number of Cells = 56

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:14:17 : Group GLUT1._.Mouse_DH_SEA2253A62 (87 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 135.757 mins elapsed.

Number of Cells = 48

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:15:31 : Group GLUT1._.Mouse_DH_SEA2253A63 (88 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 136.984 mins elapsed.

Number of Cells = 46

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:16:50 : Group GLUT1._.Mouse_DH_SEA2253A66 (89 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 138.312 mins elapsed.

Number of Cells = 46

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:18:06 : Group GLUT1._.Mouse_DH_SEA2253A58 (90 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 139.574 mins elapsed.

Number of Cells = 46

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:19:22 : Group GLUT1._.Mouse_DH_SEA2253A68 (91 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 140.844 mins elapsed.

Number of Cells = 43

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:21:05 : Group GLUT1._.Mouse_DH_SEA2253A67 (92 of 244) : Creating Group Coverage File : GLUT1._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 142.554 mins elapsed.

Number of Cells = 43

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:22:22 : Group GLUT2._.Mouse_DH_SEA2253A60 (93 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 143.836 mins elapsed.

Number of Cells = 318

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:23:45 : Group GLUT2._.Mouse_DH_SEA2253A59 (94 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 145.223 mins elapsed.

Number of Cells = 313

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:24:58 : Group GLUT2._.Mouse_DH_SEA2253A61 (95 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 146.43 mins elapsed.

Number of Cells = 290

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:26:20 : Group GLUT2._.Mouse_DH_SEA2253A63 (96 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 147.81 mins elapsed.

Number of Cells = 262

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:27:36 : Group GLUT2._.Mouse_DH_SEA2253A62 (97 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 149.071 mins elapsed.

Number of Cells = 260

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:28:41 : Group GLUT2._.Mouse_DH_SEA2253A58 (98 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 150.158 mins elapsed.

Number of Cells = 257

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:30:03 : Group GLUT2._.Mouse_DH_SEA2253A64 (99 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 151.514 mins elapsed.

Number of Cells = 204

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:31:23 : Group GLUT2._.Mouse_DH_SEA2253A67 (100 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 152.856 mins elapsed.

Number of Cells = 199

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:32:47 : Group GLUT2._.Mouse_DH_SEA2253A69 (101 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 154.253 mins elapsed.

Number of Cells = 197

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:33:59 : Group GLUT2._.Mouse_DH_SEA2253A66 (102 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 155.46 mins elapsed.

Number of Cells = 187

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:35:11 : Group GLUT2._.Mouse_DH_SEA2253A68 (103 of 244) : Creating Group Coverage File : GLUT2._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 156.661 mins elapsed.

Number of Cells = 182

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:36:14 : Group GLUT3._.Mouse_DH_SEA2253A60 (104 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 157.712 mins elapsed.

Number of Cells = 176

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:37:28 : Group GLUT3._.Mouse_DH_SEA2253A62 (105 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 158.937 mins elapsed.

Number of Cells = 168

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:38:35 : Group GLUT3._.Mouse_DH_SEA2253A59 (106 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 160.056 mins elapsed.

Number of Cells = 165

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:40:21 : Group GLUT3._.Mouse_DH_SEA2253A61 (107 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 161.821 mins elapsed.

Number of Cells = 156

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:41:40 : Group GLUT3._.Mouse_DH_SEA2253A63 (108 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 163.13 mins elapsed.

Number of Cells = 152

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:42:36 : Group GLUT3._.Mouse_DH_SEA2253A58 (109 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 164.07 mins elapsed.

Number of Cells = 146

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:43:47 : Group GLUT3._.Mouse_DH_SEA2253A67 (110 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 165.255 mins elapsed.

Number of Cells = 121

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:44:51 : Group GLUT3._.Mouse_DH_SEA2253A66 (111 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 166.327 mins elapsed.

Number of Cells = 113

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:46:03 : Group GLUT3._.Mouse_DH_SEA2253A65 (112 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 167.518 mins elapsed.

Number of Cells = 112

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:47:23 : Group GLUT3._.Mouse_DH_SEA2253A64 (113 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 168.851 mins elapsed.

Number of Cells = 105

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:48:36 : Group GLUT3._.Mouse_DH_SEA2253A69 (114 of 244) : Creating Group Coverage File : GLUT3._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 170.069 mins elapsed.

Number of Cells = 96

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:49:41 : Group GLUT4._.Mouse_DH_SEA2253A59 (115 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 171.152 mins elapsed.

Number of Cells = 88

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:50:55 : Group GLUT4._.Mouse_DH_SEA2253A60 (116 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 172.389 mins elapsed.

Number of Cells = 78

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:52:10 : Group GLUT4._.Mouse_DH_SEA2253A61 (117 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 173.644 mins elapsed.

Number of Cells = 75

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:53:21 : Group GLUT4._.Mouse_DH_SEA2253A62 (118 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 174.819 mins elapsed.

Number of Cells = 74

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:54:33 : Group GLUT4._.Mouse_DH_SEA2253A63 (119 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 176.015 mins elapsed.

Number of Cells = 71

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:55:47 : Group GLUT4._.Mouse_DH_SEA2253A58 (120 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 177.254 mins elapsed.

Number of Cells = 68

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:57:02 : Group GLUT4._.Mouse_DH_SEA2253A66 (121 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 178.502 mins elapsed.

Number of Cells = 64

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:58:11 : Group GLUT4._.Mouse_DH_SEA2253A64 (122 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 179.647 mins elapsed.

Number of Cells = 61

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 00:59:23 : Group GLUT4._.Mouse_DH_SEA2253A65 (123 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 180.851 mins elapsed.

Number of Cells = 60

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:00:27 : Group GLUT4._.Mouse_DH_SEA2253A69 (124 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 181.917 mins elapsed.

Number of Cells = 59

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:01:56 : Group GLUT4._.Mouse_DH_SEA2253A68 (125 of 244) : Creating Group Coverage File : GLUT4._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 183.399 mins elapsed.

Number of Cells = 58

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:03:02 : Group GLUT5._.Rep1 (126 of 244) : Creating Group Coverage File : GLUT5._.Rep1.insertions.coverage.h5, 184.496 mins elapsed.

Number of Cells = 5

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:06:20 : Group GLUT5._.Rep2 (127 of 244) : Creating Group Coverage File : GLUT5._.Rep2.insertions.coverage.h5, 187.798 mins elapsed.

Number of Cells = 5

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:09:46 : Group GLUT5._.Rep3 (128 of 244) : Creating Group Coverage File : GLUT5._.Rep3.insertions.coverage.h5, 191.241 mins elapsed.

Number of Cells = 5

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:13:04 : Group GLUT5._.Rep4 (129 of 244) : Creating Group Coverage File : GLUT5._.Rep4.insertions.coverage.h5, 194.54 mins elapsed.

Number of Cells = 5

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:16:35 : Group GLUT5._.Rep5 (130 of 244) : Creating Group Coverage File : GLUT5._.Rep5.insertions.coverage.h5, 198.053 mins elapsed.

Number of Cells = 5

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:19:45 : Group GLUT6._.Mouse_DH_SEA2253A60 (131 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 201.214 mins elapsed.

Number of Cells = 310

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:21:06 : Group GLUT6._.Mouse_DH_SEA2253A59 (132 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 202.564 mins elapsed.

Number of Cells = 289

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:22:27 : Group GLUT6._.Mouse_DH_SEA2253A63 (133 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 203.913 mins elapsed.

Number of Cells = 282

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:23:51 : Group GLUT6._.Mouse_DH_SEA2253A61 (134 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 205.314 mins elapsed.

Number of Cells = 274

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:25:08 : Group GLUT6._.Mouse_DH_SEA2253A58 (135 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 206.606 mins elapsed.

Number of Cells = 273

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:27:17 : Group GLUT6._.Mouse_DH_SEA2253A62 (136 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 208.751 mins elapsed.

Number of Cells = 265

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:28:34 : Group GLUT6._.Mouse_DH_SEA2253A64 (137 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 210.045 mins elapsed.

Number of Cells = 222

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:30:04 : Group GLUT6._.Mouse_DH_SEA2253A65 (138 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 211.536 mins elapsed.

Number of Cells = 206

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:31:24 : Group GLUT6._.Mouse_DH_SEA2253A69 (139 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 212.872 mins elapsed.

Number of Cells = 203

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:32:41 : Group GLUT6._.Mouse_DH_SEA2253A66 (140 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 214.161 mins elapsed.

Number of Cells = 193

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:34:06 : Group GLUT6._.Mouse_DH_SEA2253A67 (141 of 244) : Creating Group Coverage File : GLUT6._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 215.569 mins elapsed.

Number of Cells = 191

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:35:27 : Group GLUT7._.Mouse_DH_SEA2253A60 (142 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 216.916 mins elapsed.

Number of Cells = 232

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:36:44 : Group GLUT7._.Mouse_DH_SEA2253A62 (143 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 218.205 mins elapsed.

Number of Cells = 219

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:38:06 : Group GLUT7._.Mouse_DH_SEA2253A63 (144 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 219.568 mins elapsed.

Number of Cells = 214

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:39:24 : Group GLUT7._.Mouse_DH_SEA2253A61 (145 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 220.875 mins elapsed.

Number of Cells = 205

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:40:55 : Group GLUT7._.Mouse_DH_SEA2253A58 (146 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 222.395 mins elapsed.

Number of Cells = 204

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:42:17 : Group GLUT7._.Mouse_DH_SEA2253A59 (147 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 223.76 mins elapsed.

Number of Cells = 194

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:43:34 : Group GLUT7._.Mouse_DH_SEA2253A66 (148 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 225.046 mins elapsed.

Number of Cells = 170

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:44:51 : Group GLUT7._.Mouse_DH_SEA2253A67 (149 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 226.322 mins elapsed.

Number of Cells = 157

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:46:14 : Group GLUT7._.Mouse_DH_SEA2253A69 (150 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 227.701 mins elapsed.

Number of Cells = 149

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:47:31 : Group GLUT7._.Mouse_DH_SEA2253A64 (151 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 228.991 mins elapsed.

Number of Cells = 143

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:48:52 : Group GLUT7._.Mouse_DH_SEA2253A65 (152 of 244) : Creating Group Coverage File : GLUT7._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 230.345 mins elapsed.

Number of Cells = 131

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:50:08 : Group GLUT8._.Mouse_DH_SEA2253A60 (153 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 231.604 mins elapsed.

Number of Cells = 167

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:51:28 : Group GLUT8._.Mouse_DH_SEA2253A61 (154 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 232.94 mins elapsed.

Number of Cells = 155

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:52:42 : Group GLUT8._.Mouse_DH_SEA2253A59 (155 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 234.173 mins elapsed.

Number of Cells = 152

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:53:53 : Group GLUT8._.Mouse_DH_SEA2253A63 (156 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 235.352 mins elapsed.

Number of Cells = 150

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:55:13 : Group GLUT8._.Mouse_DH_SEA2253A58 (157 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 236.688 mins elapsed.

Number of Cells = 146

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:56:24 : Group GLUT8._.Mouse_DH_SEA2253A62 (158 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 237.869 mins elapsed.

Number of Cells = 142

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:57:45 : Group GLUT8._.Mouse_DH_SEA2253A67 (159 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 239.223 mins elapsed.

Number of Cells = 131

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 01:59:36 : Group GLUT8._.Mouse_DH_SEA2253A64 (160 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 241.079 mins elapsed.

Number of Cells = 116

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:00:47 : Group GLUT8._.Mouse_DH_SEA2253A65 (161 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 242.248 mins elapsed.

Number of Cells = 113

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:02:07 : Group GLUT8._.Mouse_DH_SEA2253A66 (162 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 243.58 mins elapsed.

Number of Cells = 113

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:03:23 : Group GLUT8._.Mouse_DH_SEA2253A69 (163 of 244) : Creating Group Coverage File : GLUT8._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 244.849 mins elapsed.

Number of Cells = 106

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:04:28 : Group GLUT9._.Rep1 (164 of 244) : Creating Group Coverage File : GLUT9._.Rep1.insertions.coverage.h5, 245.934 mins elapsed.

Number of Cells = 40

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:15:22 : Group GLUT9._.Rep2 (165 of 244) : Creating Group Coverage File : GLUT9._.Rep2.insertions.coverage.h5, 256.836 mins elapsed.

Number of Cells = 40

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:24:15 : Group GLUT9._.Rep3 (166 of 244) : Creating Group Coverage File : GLUT9._.Rep3.insertions.coverage.h5, 265.715 mins elapsed.

Number of Cells = 40

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:32:19 : Group GLUT9._.Rep4 (167 of 244) : Creating Group Coverage File : GLUT9._.Rep4.insertions.coverage.h5, 273.789 mins elapsed.

Number of Cells = 40

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:41:37 : Group GLUT9._.Rep5 (168 of 244) : Creating Group Coverage File : GLUT9._.Rep5.insertions.coverage.h5, 283.089 mins elapsed.

Number of Cells = 40

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 02:50:15 : Group GLUT10._.Rep1 (169 of 244) : Creating Group Coverage File : GLUT10._.Rep1.insertions.coverage.h5, 291.721 mins elapsed.

Number of Cells = 58

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:01:11 : Group GLUT10._.Rep2 (170 of 244) : Creating Group Coverage File : GLUT10._.Rep2.insertions.coverage.h5, 302.659 mins elapsed.

Number of Cells = 58

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:11:24 : Group GLUT10._.Rep3 (171 of 244) : Creating Group Coverage File : GLUT10._.Rep3.insertions.coverage.h5, 312.877 mins elapsed.

Number of Cells = 58

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:20:09 : Group GLUT10._.Rep4 (172 of 244) : Creating Group Coverage File : GLUT10._.Rep4.insertions.coverage.h5, 321.614 mins elapsed.

Number of Cells = 58

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:29:43 : Group GLUT10._.Rep5 (173 of 244) : Creating Group Coverage File : GLUT10._.Rep5.insertions.coverage.h5, 331.194 mins elapsed.

Number of Cells = 57

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:38:08 : Group GLUT11._.Rep1 (174 of 244) : Creating Group Coverage File : GLUT11._.Rep1.insertions.coverage.h5, 339.596 mins elapsed.

Number of Cells = 8

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:42:43 : Group GLUT11._.Rep2 (175 of 244) : Creating Group Coverage File : GLUT11._.Rep2.insertions.coverage.h5, 344.195 mins elapsed.

Number of Cells = 8

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:46:45 : Group GLUT11._.Rep3 (176 of 244) : Creating Group Coverage File : GLUT11._.Rep3.insertions.coverage.h5, 348.22 mins elapsed.

Number of Cells = 8

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:50:50 : Group GLUT11._.Rep4 (177 of 244) : Creating Group Coverage File : GLUT11._.Rep4.insertions.coverage.h5, 352.303 mins elapsed.

Number of Cells = 7

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:54:48 : Group GLUT11._.Rep5 (178 of 244) : Creating Group Coverage File : GLUT11._.Rep5.insertions.coverage.h5, 356.268 mins elapsed.

Number of Cells = 7

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 03:58:50 : Group Meninges._.Mouse_DH_SEA2253A62 (179 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 360.309 mins elapsed.

Number of Cells = 142

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:00:04 : Group Meninges._.Mouse_DH_SEA2253A59 (180 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 361.531 mins elapsed.

Number of Cells = 142

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:01:14 : Group Meninges._.Mouse_DH_SEA2253A58 (181 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 362.704 mins elapsed.

Number of Cells = 140

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:02:36 : Group Meninges._.Mouse_DH_SEA2253A63 (182 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 364.073 mins elapsed.

Number of Cells = 139

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:03:44 : Group Meninges._.Mouse_DH_SEA2253A65 (183 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 365.201 mins elapsed.

Number of Cells = 136

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:04:54 : Group Meninges._.Mouse_DH_SEA2253A61 (184 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 366.368 mins elapsed.

Number of Cells = 130

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:06:01 : Group Meninges._.Mouse_DH_SEA2253A60 (185 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 367.487 mins elapsed.

Number of Cells = 127

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:07:08 : Group Meninges._.Mouse_DH_SEA2253A67 (186 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 368.596 mins elapsed.

Number of Cells = 126

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:08:15 : Group Meninges._.Mouse_DH_SEA2253A66 (187 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 369.715 mins elapsed.

Number of Cells = 119

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:09:26 : Group Meninges._.Mouse_DH_SEA2253A69 (188 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 370.903 mins elapsed.

Number of Cells = 112

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:10:31 : Group Meninges._.Mouse_DH_SEA2253A68 (189 of 244) : Creating Group Coverage File : Meninges._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 371.992 mins elapsed.

Number of Cells = 107

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:11:34 : Group Microglia._.Mouse_DH_SEA2253A59 (190 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 373.034 mins elapsed.

Number of Cells = 245

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:12:44 : Group Microglia._.Mouse_DH_SEA2253A60 (191 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 374.2 mins elapsed.

Number of Cells = 242

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:13:53 : Group Microglia._.Mouse_DH_SEA2253A62 (192 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 375.353 mins elapsed.

Number of Cells = 231

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:15:09 : Group Microglia._.Mouse_DH_SEA2253A61 (193 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 376.621 mins elapsed.

Number of Cells = 226

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:16:24 : Group Microglia._.Mouse_DH_SEA2253A63 (194 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 377.871 mins elapsed.

Number of Cells = 201

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:17:32 : Group Microglia._.Mouse_DH_SEA2253A58 (195 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 379.004 mins elapsed.

Number of Cells = 200

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:18:30 : Group Microglia._.Mouse_DH_SEA2253A69 (196 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 379.975 mins elapsed.

Number of Cells = 182

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:19:37 : Group Microglia._.Mouse_DH_SEA2253A64 (197 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 381.086 mins elapsed.

Number of Cells = 177

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:20:45 : Group Microglia._.Mouse_DH_SEA2253A67 (198 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 382.226 mins elapsed.

Number of Cells = 170

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:21:58 : Group Microglia._.Mouse_DH_SEA2253A65 (199 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 383.444 mins elapsed.

Number of Cells = 160

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:23:10 : Group Microglia._.Mouse_DH_SEA2253A66 (200 of 244) : Creating Group Coverage File : Microglia._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 384.63 mins elapsed.

Number of Cells = 152

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:24:22 : Group midVen._.Mouse_DH_SEA2253A60 (201 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 385.84 mins elapsed.

Number of Cells = 186

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:25:38 : Group midVen._.Mouse_DH_SEA2253A59 (202 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 387.102 mins elapsed.

Number of Cells = 158

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:26:53 : Group midVen._.Mouse_DH_SEA2253A61 (203 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 388.356 mins elapsed.

Number of Cells = 152

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:28:08 : Group midVen._.Mouse_DH_SEA2253A62 (204 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 389.609 mins elapsed.

Number of Cells = 148

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:29:16 : Group midVen._.Mouse_DH_SEA2253A63 (205 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 390.737 mins elapsed.

Number of Cells = 144

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:30:42 : Group midVen._.Mouse_DH_SEA2253A58 (206 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 392.167 mins elapsed.

Number of Cells = 143

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:31:54 : Group midVen._.Mouse_DH_SEA2253A65 (207 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 393.365 mins elapsed.

Number of Cells = 142

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:33:02 : Group midVen._.Mouse_DH_SEA2253A67 (208 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 394.496 mins elapsed.

Number of Cells = 117

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:34:33 : Group midVen._.Mouse_DH_SEA2253A64 (209 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 396.018 mins elapsed.

Number of Cells = 117

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:35:48 : Group midVen._.Mouse_DH_SEA2253A66 (210 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 397.264 mins elapsed.

Number of Cells = 114

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:37:10 : Group midVen._.Mouse_DH_SEA2253A68 (211 of 244) : Creating Group Coverage File : midVen._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 398.64 mins elapsed.

Number of Cells = 98

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:38:23 : Group Oligo.1._.Mouse_DH_SEA2253A67 (212 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 399.854 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:39:49 : Group Oligo.1._.Mouse_DH_SEA2253A58 (213 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 401.284 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:41:20 : Group Oligo.1._.Mouse_DH_SEA2253A64 (214 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 402.798 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:42:53 : Group Oligo.1._.Mouse_DH_SEA2253A65 (215 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A65.insertions.coverage.h5, 404.359 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:44:28 : Group Oligo.1._.Mouse_DH_SEA2253A63 (216 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 405.933 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:45:42 : Group Oligo.1._.Mouse_DH_SEA2253A61 (217 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 407.178 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:47:13 : Group Oligo.1._.Mouse_DH_SEA2253A69 (218 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 408.681 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:48:51 : Group Oligo.1._.Mouse_DH_SEA2253A59 (219 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 410.32 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:50:16 : Group Oligo.1._.Mouse_DH_SEA2253A68 (220 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 411.744 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:51:41 : Group Oligo.1._.Mouse_DH_SEA2253A60 (221 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 413.147 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:53:19 : Group Oligo.1._.Mouse_DH_SEA2253A62 (222 of 244) : Creating Group Coverage File : Oligo.1._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 414.785 mins elapsed.

Number of Cells = 1000

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:54:47 : Group Oligo.2._.Mouse_DH_SEA2253A63 (223 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 416.246 mins elapsed.

Number of Cells = 139

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:55:57 : Group Oligo.2._.Mouse_DH_SEA2253A60 (224 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 417.416 mins elapsed.

Number of Cells = 139

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:57:14 : Group Oligo.2._.Mouse_DH_SEA2253A59 (225 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 418.697 mins elapsed.

Number of Cells = 137

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:58:37 : Group Oligo.2._.Mouse_DH_SEA2253A58 (226 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 420.093 mins elapsed.

Number of Cells = 126

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 04:59:44 : Group Oligo.2._.Mouse_DH_SEA2253A62 (227 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 421.21 mins elapsed.

Number of Cells = 117

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:00:48 : Group Oligo.2._.Mouse_DH_SEA2253A61 (228 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 422.268 mins elapsed.

Number of Cells = 107

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:02:01 : Group Oligo.2._.Mouse_DH_SEA2253A69 (229 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 423.482 mins elapsed.

Number of Cells = 100

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:03:14 : Group Oligo.2._.Mouse_DH_SEA2253A66 (230 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 424.708 mins elapsed.

Number of Cells = 90

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:04:26 : Group Oligo.2._.Mouse_DH_SEA2253A64 (231 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 425.909 mins elapsed.

Number of Cells = 74

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:05:37 : Group Oligo.2._.Mouse_DH_SEA2253A67 (232 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 427.09 mins elapsed.

Number of Cells = 73

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:06:52 : Group Oligo.2._.Mouse_DH_SEA2253A68 (233 of 244) : Creating Group Coverage File : Oligo.2._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 428.335 mins elapsed.

Number of Cells = 73

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:07:54 : Group OPC._.Mouse_DH_SEA2253A60 (234 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A60.insertions.coverage.h5, 429.375 mins elapsed.

Number of Cells = 369

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:09:21 : Group OPC._.Mouse_DH_SEA2253A59 (235 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A59.insertions.coverage.h5, 430.822 mins elapsed.

Number of Cells = 355

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:10:32 : Group OPC._.Mouse_DH_SEA2253A62 (236 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A62.insertions.coverage.h5, 432.003 mins elapsed.

Number of Cells = 354

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:11:47 : Group OPC._.Mouse_DH_SEA2253A58 (237 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A58.insertions.coverage.h5, 433.26 mins elapsed.

Number of Cells = 329

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:13:06 : Group OPC._.Mouse_DH_SEA2253A63 (238 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A63.insertions.coverage.h5, 434.57 mins elapsed.

Number of Cells = 315

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:14:24 : Group OPC._.Mouse_DH_SEA2253A61 (239 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A61.insertions.coverage.h5, 435.874 mins elapsed.

Number of Cells = 310

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:15:45 : Group OPC._.Mouse_DH_SEA2253A66 (240 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A66.insertions.coverage.h5, 437.228 mins elapsed.

Number of Cells = 245

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:16:51 : Group OPC._.Mouse_DH_SEA2253A69 (241 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A69.insertions.coverage.h5, 438.316 mins elapsed.

Number of Cells = 237

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:18:02 : Group OPC._.Mouse_DH_SEA2253A64 (242 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A64.insertions.coverage.h5, 439.507 mins elapsed.

Number of Cells = 234

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:19:17 : Group OPC._.Mouse_DH_SEA2253A68 (243 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A68.insertions.coverage.h5, 440.751 mins elapsed.

Number of Cells = 218

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:20:24 : Group OPC._.Mouse_DH_SEA2253A67 (244 of 244) : Creating Group Coverage File : OPC._.Mouse_DH_SEA2253A67.insertions.coverage.h5, 441.87 mins elapsed.

Number of Cells = 202

Coverage File Exists!

Added Coverage Group

Added Metadata Group

Added ArrowCoverage Class

Added Coverage/Info

Added Coverage/Info/CellNames

2022-10-18 05:21:35 : Adding Kmer Bias to Coverage Files!, 443.047 mins elapsed.

Kmer Bias chr1 (1 of 21)

chr1 
Coverage File chr1 (1 of 244)

Coverage File chr1 (2 of 244)

Coverage File chr1 (3 of 244)

Coverage File chr1 (4 of 244)

Coverage File chr1 (5 of 244)

Coverage File chr1 (6 of 244)

Coverage File chr1 (7 of 244)

Coverage File chr1 (8 of 244)

Coverage File chr1 (9 of 244)

Coverage File chr1 (10 of 244)

Coverage File chr1 (11 of 244)

Coverage File chr1 (12 of 244)

Coverage File chr1 (13 of 244)

Coverage File chr1 (14 of 244)

Coverage File chr1 (15 of 244)

Coverage File chr1 (16 of 244)

Coverage File chr1 (17 of 244)

Coverage File chr1 (18 of 244)

Coverage File chr1 (19 of 244)

Coverage File chr1 (20 of 244)

Coverage File chr1 (21 of 244)

Coverage File chr1 (22 of 244)

Coverage File chr1 (23 of 244)

Coverage File chr1 (24 of 244)

Coverage File chr1 (25 of 244)

Coverage File chr1 (26 of 244)

Coverage File chr1 (27 of 244)

Coverage File chr1 (28 of 244)

Coverage File chr1 (29 of 244)

Coverage File chr1 (30 of 244)

Coverage File chr1 (31 of 244)

Coverage File chr1 (32 of 244)

Coverage File chr1 (33 of 244)

Coverage File chr1 (34 of 244)

Coverage File chr1 (35 of 244)

Coverage File chr1 (36 of 244)

Coverage File chr1 (37 of 244)

Coverage File chr1 (38 of 244)

Coverage File chr1 (39 of 244)

Coverage File chr1 (40 of 244)

Coverage File chr1 (41 of 244)

Coverage File chr1 (42 of 244)

Coverage File chr1 (43 of 244)

Coverage File chr1 (44 of 244)

Coverage File chr1 (45 of 244)

Coverage File chr1 (46 of 244)

Coverage File chr1 (47 of 244)

Coverage File chr1 (48 of 244)

Coverage File chr1 (49 of 244)

Coverage File chr1 (50 of 244)

Coverage File chr1 (51 of 244)

Coverage File chr1 (52 of 244)

Coverage File chr1 (53 of 244)

Coverage File chr1 (54 of 244)

Coverage File chr1 (55 of 244)

Coverage File chr1 (56 of 244)

Coverage File chr1 (57 of 244)

Coverage File chr1 (58 of 244)

Coverage File chr1 (59 of 244)

Coverage File chr1 (60 of 244)

Coverage File chr1 (61 of 244)

Coverage File chr1 (62 of 244)

Coverage File chr1 (63 of 244)

Coverage File chr1 (64 of 244)

Coverage File chr1 (65 of 244)

Coverage File chr1 (66 of 244)

Coverage File chr1 (67 of 244)

Coverage File chr1 (68 of 244)

Coverage File chr1 (69 of 244)

Coverage File chr1 (70 of 244)

Coverage File chr1 (71 of 244)

Coverage File chr1 (72 of 244)

Coverage File chr1 (73 of 244)

Coverage File chr1 (74 of 244)

Coverage File chr1 (75 of 244)

Coverage File chr1 (76 of 244)

Coverage File chr1 (77 of 244)

Coverage File chr1 (78 of 244)

Coverage File chr1 (79 of 244)

Coverage File chr1 (80 of 244)

Coverage File chr1 (81 of 244)

Coverage File chr1 (82 of 244)

Coverage File chr1 (83 of 244)

Coverage File chr1 (84 of 244)

Coverage File chr1 (85 of 244)

Coverage File chr1 (86 of 244)

Coverage File chr1 (87 of 244)

Coverage File chr1 (88 of 244)

Coverage File chr1 (89 of 244)

Coverage File chr1 (90 of 244)

Coverage File chr1 (91 of 244)

Coverage File chr1 (92 of 244)

Coverage File chr1 (93 of 244)

Coverage File chr1 (94 of 244)

Coverage File chr1 (95 of 244)

Coverage File chr1 (96 of 244)

Coverage File chr1 (97 of 244)

Coverage File chr1 (98 of 244)

Coverage File chr1 (99 of 244)

Coverage File chr1 (100 of 244)

Coverage File chr1 (101 of 244)

Coverage File chr1 (102 of 244)

Coverage File chr1 (103 of 244)

Coverage File chr1 (104 of 244)

Coverage File chr1 (105 of 244)

Coverage File chr1 (106 of 244)

Coverage File chr1 (107 of 244)

Coverage File chr1 (108 of 244)

Coverage File chr1 (109 of 244)

Coverage File chr1 (110 of 244)

Coverage File chr1 (111 of 244)

Coverage File chr1 (112 of 244)

Coverage File chr1 (113 of 244)

Coverage File chr1 (114 of 244)

Coverage File chr1 (115 of 244)

Coverage File chr1 (116 of 244)

Coverage File chr1 (117 of 244)

Coverage File chr1 (118 of 244)

Coverage File chr1 (119 of 244)

Coverage File chr1 (120 of 244)

Coverage File chr1 (121 of 244)

Coverage File chr1 (122 of 244)

Coverage File chr1 (123 of 244)

Coverage File chr1 (124 of 244)

Coverage File chr1 (125 of 244)

Coverage File chr1 (126 of 244)

Coverage File chr1 (127 of 244)

Coverage File chr1 (128 of 244)

Coverage File chr1 (129 of 244)

Coverage File chr1 (130 of 244)

Coverage File chr1 (131 of 244)

Coverage File chr1 (132 of 244)

Coverage File chr1 (133 of 244)

Coverage File chr1 (134 of 244)

Coverage File chr1 (135 of 244)

Coverage File chr1 (136 of 244)

Coverage File chr1 (137 of 244)

Coverage File chr1 (138 of 244)

Coverage File chr1 (139 of 244)

Coverage File chr1 (140 of 244)

Coverage File chr1 (141 of 244)

Coverage File chr1 (142 of 244)

Coverage File chr1 (143 of 244)

Coverage File chr1 (144 of 244)

Coverage File chr1 (145 of 244)

Coverage File chr1 (146 of 244)

Coverage File chr1 (147 of 244)

Coverage File chr1 (148 of 244)

Coverage File chr1 (149 of 244)

Coverage File chr1 (150 of 244)

Coverage File chr1 (151 of 244)

Coverage File chr1 (152 of 244)

Coverage File chr1 (153 of 244)

Coverage File chr1 (154 of 244)

Coverage File chr1 (155 of 244)

Coverage File chr1 (156 of 244)

Coverage File chr1 (157 of 244)

Coverage File chr1 (158 of 244)

Coverage File chr1 (159 of 244)

Coverage File chr1 (160 of 244)

Coverage File chr1 (161 of 244)

Coverage File chr1 (162 of 244)

Coverage File chr1 (163 of 244)

Coverage File chr1 (164 of 244)

Coverage File chr1 (165 of 244)

Coverage File chr1 (166 of 244)

Coverage File chr1 (167 of 244)

Coverage File chr1 (168 of 244)

Coverage File chr1 (169 of 244)

Coverage File chr1 (170 of 244)

Coverage File chr1 (171 of 244)

Coverage File chr1 (172 of 244)

Coverage File chr1 (173 of 244)

Coverage File chr1 (174 of 244)

Coverage File chr1 (175 of 244)

Coverage File chr1 (176 of 244)

Coverage File chr1 (177 of 244)

Coverage File chr1 (178 of 244)

Coverage File chr1 (179 of 244)

Coverage File chr1 (180 of 244)

Coverage File chr1 (181 of 244)

Coverage File chr1 (182 of 244)

Coverage File chr1 (183 of 244)

Coverage File chr1 (184 of 244)

Coverage File chr1 (185 of 244)

Coverage File chr1 (186 of 244)

Coverage File chr1 (187 of 244)

Coverage File chr1 (188 of 244)

Coverage File chr1 (189 of 244)

Coverage File chr1 (190 of 244)

Coverage File chr1 (191 of 244)

Coverage File chr1 (192 of 244)

Coverage File chr1 (193 of 244)

Coverage File chr1 (194 of 244)

Coverage File chr1 (195 of 244)

Coverage File chr1 (196 of 244)

Coverage File chr1 (197 of 244)

Coverage File chr1 (198 of 244)

Coverage File chr1 (199 of 244)

Coverage File chr1 (200 of 244)

Coverage File chr1 (201 of 244)

Coverage File chr1 (202 of 244)

Coverage File chr1 (203 of 244)

Coverage File chr1 (204 of 244)

Coverage File chr1 (205 of 244)

Coverage File chr1 (206 of 244)

Coverage File chr1 (207 of 244)

Coverage File chr1 (208 of 244)

Coverage File chr1 (209 of 244)

Coverage File chr1 (210 of 244)

Coverage File chr1 (211 of 244)

Coverage File chr1 (212 of 244)

Coverage File chr1 (213 of 244)

Coverage File chr1 (214 of 244)

Coverage File chr1 (215 of 244)

Coverage File chr1 (216 of 244)

Coverage File chr1 (217 of 244)

Coverage File chr1 (218 of 244)

Coverage File chr1 (219 of 244)

Coverage File chr1 (220 of 244)

Coverage File chr1 (221 of 244)

Coverage File chr1 (222 of 244)

Coverage File chr1 (223 of 244)

Coverage File chr1 (224 of 244)

Coverage File chr1 (225 of 244)

Coverage File chr1 (226 of 244)

Coverage File chr1 (227 of 244)

Coverage File chr1 (228 of 244)

Coverage File chr1 (229 of 244)

Coverage File chr1 (230 of 244)

Coverage File chr1 (231 of 244)

Coverage File chr1 (232 of 244)

Coverage File chr1 (233 of 244)

Coverage File chr1 (234 of 244)

Coverage File chr1 (235 of 244)

Coverage File chr1 (236 of 244)

Coverage File chr1 (237 of 244)

Coverage File chr1 (238 of 244)

Coverage File chr1 (239 of 244)

Coverage File chr1 (240 of 244)

Coverage File chr1 (241 of 244)

Coverage File chr1 (242 of 244)

Coverage File chr1 (243 of 244)

Coverage File chr1 (244 of 244)

Kmer Bias chr10 (2 of 21)

chr10 
Coverage File chr10 (1 of 244)

Coverage File chr10 (2 of 244)

Coverage File chr10 (3 of 244)

Coverage File chr10 (4 of 244)

Coverage File chr10 (5 of 244)

Coverage File chr10 (6 of 244)

Coverage File chr10 (7 of 244)

Coverage File chr10 (8 of 244)

Coverage File chr10 (9 of 244)

Coverage File chr10 (10 of 244)

Coverage File chr10 (11 of 244)

Coverage File chr10 (12 of 244)

Coverage File chr10 (13 of 244)

Coverage File chr10 (14 of 244)

Coverage File chr10 (15 of 244)

Coverage File chr10 (16 of 244)

Coverage File chr10 (17 of 244)

Coverage File chr10 (18 of 244)

Coverage File chr10 (19 of 244)

Coverage File chr10 (20 of 244)

Coverage File chr10 (21 of 244)

Coverage File chr10 (22 of 244)

Coverage File chr10 (23 of 244)

Coverage File chr10 (24 of 244)

Coverage File chr10 (25 of 244)

Coverage File chr10 (26 of 244)

Coverage File chr10 (27 of 244)

Coverage File chr10 (28 of 244)

Coverage File chr10 (29 of 244)

Coverage File chr10 (30 of 244)

Coverage File chr10 (31 of 244)

Coverage File chr10 (32 of 244)

Coverage File chr10 (33 of 244)

Coverage File chr10 (34 of 244)

Coverage File chr10 (35 of 244)

Coverage File chr10 (36 of 244)

Coverage File chr10 (37 of 244)

Coverage File chr10 (38 of 244)

Coverage File chr10 (39 of 244)

Coverage File chr10 (40 of 244)

Coverage File chr10 (41 of 244)

Coverage File chr10 (42 of 244)

Coverage File chr10 (43 of 244)

Coverage File chr10 (44 of 244)

Coverage File chr10 (45 of 244)

Coverage File chr10 (46 of 244)

Coverage File chr10 (47 of 244)

Coverage File chr10 (48 of 244)

Coverage File chr10 (49 of 244)

Coverage File chr10 (50 of 244)

Coverage File chr10 (51 of 244)

Coverage File chr10 (52 of 244)

Coverage File chr10 (53 of 244)

Coverage File chr10 (54 of 244)

Coverage File chr10 (55 of 244)

Coverage File chr10 (56 of 244)

Coverage File chr10 (57 of 244)

Coverage File chr10 (58 of 244)

Coverage File chr10 (59 of 244)

Coverage File chr10 (60 of 244)

Coverage File chr10 (61 of 244)

Coverage File chr10 (62 of 244)

Coverage File chr10 (63 of 244)

Coverage File chr10 (64 of 244)

Coverage File chr10 (65 of 244)

Coverage File chr10 (66 of 244)

Coverage File chr10 (67 of 244)

Coverage File chr10 (68 of 244)

Coverage File chr10 (69 of 244)

Coverage File chr10 (70 of 244)

Coverage File chr10 (71 of 244)

Coverage File chr10 (72 of 244)

Coverage File chr10 (73 of 244)

Coverage File chr10 (74 of 244)

Coverage File chr10 (75 of 244)

Coverage File chr10 (76 of 244)

Coverage File chr10 (77 of 244)

Coverage File chr10 (78 of 244)

Coverage File chr10 (79 of 244)

Coverage File chr10 (80 of 244)

Coverage File chr10 (81 of 244)

Coverage File chr10 (82 of 244)

Coverage File chr10 (83 of 244)

Coverage File chr10 (84 of 244)

Coverage File chr10 (85 of 244)

Coverage File chr10 (86 of 244)

Coverage File chr10 (87 of 244)

Coverage File chr10 (88 of 244)

Coverage File chr10 (89 of 244)

Coverage File chr10 (90 of 244)

Coverage File chr10 (91 of 244)

Coverage File chr10 (92 of 244)

Coverage File chr10 (93 of 244)

Coverage File chr10 (94 of 244)

Coverage File chr10 (95 of 244)

Coverage File chr10 (96 of 244)

Coverage File chr10 (97 of 244)

Coverage File chr10 (98 of 244)

Coverage File chr10 (99 of 244)

Coverage File chr10 (100 of 244)

Coverage File chr10 (101 of 244)

Coverage File chr10 (102 of 244)

Coverage File chr10 (103 of 244)

Coverage File chr10 (104 of 244)

Coverage File chr10 (105 of 244)

Coverage File chr10 (106 of 244)

Coverage File chr10 (107 of 244)

Coverage File chr10 (108 of 244)

Coverage File chr10 (109 of 244)

Coverage File chr10 (110 of 244)

Coverage File chr10 (111 of 244)

Coverage File chr10 (112 of 244)

Coverage File chr10 (113 of 244)

Coverage File chr10 (114 of 244)

Coverage File chr10 (115 of 244)

Coverage File chr10 (116 of 244)

Coverage File chr10 (117 of 244)

Coverage File chr10 (118 of 244)

Coverage File chr10 (119 of 244)

Coverage File chr10 (120 of 244)

Coverage File chr10 (121 of 244)

Coverage File chr10 (122 of 244)

Coverage File chr10 (123 of 244)

Coverage File chr10 (124 of 244)

Coverage File chr10 (125 of 244)

Coverage File chr10 (126 of 244)

Coverage File chr10 (127 of 244)

Coverage File chr10 (128 of 244)

Coverage File chr10 (129 of 244)

Coverage File chr10 (130 of 244)

Coverage File chr10 (131 of 244)

Coverage File chr10 (132 of 244)

Coverage File chr10 (133 of 244)

Coverage File chr10 (134 of 244)

Coverage File chr10 (135 of 244)

Coverage File chr10 (136 of 244)

Coverage File chr10 (137 of 244)

Coverage File chr10 (138 of 244)

Coverage File chr10 (139 of 244)

Coverage File chr10 (140 of 244)

Coverage File chr10 (141 of 244)

Coverage File chr10 (142 of 244)

Coverage File chr10 (143 of 244)

Coverage File chr10 (144 of 244)

Coverage File chr10 (145 of 244)

Coverage File chr10 (146 of 244)

Coverage File chr10 (147 of 244)

Coverage File chr10 (148 of 244)

Coverage File chr10 (149 of 244)

Coverage File chr10 (150 of 244)

Coverage File chr10 (151 of 244)

Coverage File chr10 (152 of 244)

Coverage File chr10 (153 of 244)

Coverage File chr10 (154 of 244)

Coverage File chr10 (155 of 244)

Coverage File chr10 (156 of 244)

Coverage File chr10 (157 of 244)

Coverage File chr10 (158 of 244)

Coverage File chr10 (159 of 244)

Coverage File chr10 (160 of 244)

Coverage File chr10 (161 of 244)

Coverage File chr10 (162 of 244)

Coverage File chr10 (163 of 244)

Coverage File chr10 (164 of 244)

Coverage File chr10 (165 of 244)

Coverage File chr10 (166 of 244)

Coverage File chr10 (167 of 244)

Coverage File chr10 (168 of 244)

Coverage File chr10 (169 of 244)

Coverage File chr10 (170 of 244)

Coverage File chr10 (171 of 244)

Coverage File chr10 (172 of 244)

Coverage File chr10 (173 of 244)

Coverage File chr10 (174 of 244)

Coverage File chr10 (175 of 244)

Coverage File chr10 (176 of 244)

Coverage File chr10 (177 of 244)

Coverage File chr10 (178 of 244)

Coverage File chr10 (179 of 244)

Coverage File chr10 (180 of 244)

Coverage File chr10 (181 of 244)

Coverage File chr10 (182 of 244)

Coverage File chr10 (183 of 244)

Coverage File chr10 (184 of 244)

Coverage File chr10 (185 of 244)

Coverage File chr10 (186 of 244)

Coverage File chr10 (187 of 244)

Coverage File chr10 (188 of 244)

Coverage File chr10 (189 of 244)

Coverage File chr10 (190 of 244)

Coverage File chr10 (191 of 244)

Coverage File chr10 (192 of 244)

Coverage File chr10 (193 of 244)

Coverage File chr10 (194 of 244)

Coverage File chr10 (195 of 244)

Coverage File chr10 (196 of 244)

Coverage File chr10 (197 of 244)

Coverage File chr10 (198 of 244)

Coverage File chr10 (199 of 244)

Coverage File chr10 (200 of 244)

Coverage File chr10 (201 of 244)

Coverage File chr10 (202 of 244)

Coverage File chr10 (203 of 244)

Coverage File chr10 (204 of 244)

Coverage File chr10 (205 of 244)

Coverage File chr10 (206 of 244)

Coverage File chr10 (207 of 244)

Coverage File chr10 (208 of 244)

Coverage File chr10 (209 of 244)

Coverage File chr10 (210 of 244)

Coverage File chr10 (211 of 244)

Coverage File chr10 (212 of 244)

Coverage File chr10 (213 of 244)

Coverage File chr10 (214 of 244)

Coverage File chr10 (215 of 244)

Coverage File chr10 (216 of 244)

Coverage File chr10 (217 of 244)

Coverage File chr10 (218 of 244)

Coverage File chr10 (219 of 244)

Coverage File chr10 (220 of 244)

Coverage File chr10 (221 of 244)

Coverage File chr10 (222 of 244)

Coverage File chr10 (223 of 244)

Coverage File chr10 (224 of 244)

Coverage File chr10 (225 of 244)

Coverage File chr10 (226 of 244)

Coverage File chr10 (227 of 244)

Coverage File chr10 (228 of 244)

Coverage File chr10 (229 of 244)

Coverage File chr10 (230 of 244)

Coverage File chr10 (231 of 244)

Coverage File chr10 (232 of 244)

Coverage File chr10 (233 of 244)

Coverage File chr10 (234 of 244)

Coverage File chr10 (235 of 244)

Coverage File chr10 (236 of 244)

Coverage File chr10 (237 of 244)

Coverage File chr10 (238 of 244)

Coverage File chr10 (239 of 244)

Coverage File chr10 (240 of 244)

Coverage File chr10 (241 of 244)

Coverage File chr10 (242 of 244)

Coverage File chr10 (243 of 244)

Coverage File chr10 (244 of 244)

Kmer Bias chr11 (3 of 21)

chr11 
Coverage File chr11 (1 of 244)

Coverage File chr11 (2 of 244)

Coverage File chr11 (3 of 244)

Coverage File chr11 (4 of 244)

Coverage File chr11 (5 of 244)

Coverage File chr11 (6 of 244)

Coverage File chr11 (7 of 244)

Coverage File chr11 (8 of 244)

Coverage File chr11 (9 of 244)

Coverage File chr11 (10 of 244)

Coverage File chr11 (11 of 244)

Coverage File chr11 (12 of 244)

Coverage File chr11 (13 of 244)

Coverage File chr11 (14 of 244)

Coverage File chr11 (15 of 244)

Coverage File chr11 (16 of 244)

Coverage File chr11 (17 of 244)

Coverage File chr11 (18 of 244)

Coverage File chr11 (19 of 244)

Coverage File chr11 (20 of 244)

Coverage File chr11 (21 of 244)

Coverage File chr11 (22 of 244)

Coverage File chr11 (23 of 244)

Coverage File chr11 (24 of 244)

Coverage File chr11 (25 of 244)

Coverage File chr11 (26 of 244)

Coverage File chr11 (27 of 244)

Coverage File chr11 (28 of 244)

Coverage File chr11 (29 of 244)

Coverage File chr11 (30 of 244)

Coverage File chr11 (31 of 244)

Coverage File chr11 (32 of 244)

Coverage File chr11 (33 of 244)

Coverage File chr11 (34 of 244)

Coverage File chr11 (35 of 244)

Coverage File chr11 (36 of 244)

Coverage File chr11 (37 of 244)

Coverage File chr11 (38 of 244)

Coverage File chr11 (39 of 244)

Coverage File chr11 (40 of 244)

Coverage File chr11 (41 of 244)

Coverage File chr11 (42 of 244)

Coverage File chr11 (43 of 244)

Coverage File chr11 (44 of 244)

Coverage File chr11 (45 of 244)

Coverage File chr11 (46 of 244)

Coverage File chr11 (47 of 244)

Coverage File chr11 (48 of 244)

Coverage File chr11 (49 of 244)

Coverage File chr11 (50 of 244)

Coverage File chr11 (51 of 244)

Coverage File chr11 (52 of 244)

Coverage File chr11 (53 of 244)

Coverage File chr11 (54 of 244)

Coverage File chr11 (55 of 244)

Coverage File chr11 (56 of 244)

Coverage File chr11 (57 of 244)

Coverage File chr11 (58 of 244)

Coverage File chr11 (59 of 244)

Coverage File chr11 (60 of 244)

Coverage File chr11 (61 of 244)

Coverage File chr11 (62 of 244)

Coverage File chr11 (63 of 244)

Coverage File chr11 (64 of 244)

Coverage File chr11 (65 of 244)

Coverage File chr11 (66 of 244)

Coverage File chr11 (67 of 244)

Coverage File chr11 (68 of 244)

Coverage File chr11 (69 of 244)

Coverage File chr11 (70 of 244)

Coverage File chr11 (71 of 244)

Coverage File chr11 (72 of 244)

Coverage File chr11 (73 of 244)

Coverage File chr11 (74 of 244)

Coverage File chr11 (75 of 244)

Coverage File chr11 (76 of 244)

Coverage File chr11 (77 of 244)

Coverage File chr11 (78 of 244)

Coverage File chr11 (79 of 244)

Coverage File chr11 (80 of 244)

Coverage File chr11 (81 of 244)

Coverage File chr11 (82 of 244)

Coverage File chr11 (83 of 244)

Coverage File chr11 (84 of 244)

Coverage File chr11 (85 of 244)

Coverage File chr11 (86 of 244)

Coverage File chr11 (87 of 244)

Coverage File chr11 (88 of 244)

Coverage File chr11 (89 of 244)

Coverage File chr11 (90 of 244)

Coverage File chr11 (91 of 244)

Coverage File chr11 (92 of 244)

Coverage File chr11 (93 of 244)

Coverage File chr11 (94 of 244)

Coverage File chr11 (95 of 244)

Coverage File chr11 (96 of 244)

Coverage File chr11 (97 of 244)

Coverage File chr11 (98 of 244)

Coverage File chr11 (99 of 244)

Coverage File chr11 (100 of 244)

Coverage File chr11 (101 of 244)

Coverage File chr11 (102 of 244)

Coverage File chr11 (103 of 244)

Coverage File chr11 (104 of 244)

Coverage File chr11 (105 of 244)

Coverage File chr11 (106 of 244)

Coverage File chr11 (107 of 244)

Coverage File chr11 (108 of 244)

Coverage File chr11 (109 of 244)

Coverage File chr11 (110 of 244)

Coverage File chr11 (111 of 244)

Coverage File chr11 (112 of 244)

Coverage File chr11 (113 of 244)

Coverage File chr11 (114 of 244)

Coverage File chr11 (115 of 244)

Coverage File chr11 (116 of 244)

Coverage File chr11 (117 of 244)

Coverage File chr11 (118 of 244)

Coverage File chr11 (119 of 244)

Coverage File chr11 (120 of 244)

Coverage File chr11 (121 of 244)

Coverage File chr11 (122 of 244)

Coverage File chr11 (123 of 244)

Coverage File chr11 (124 of 244)

Coverage File chr11 (125 of 244)

Coverage File chr11 (126 of 244)

Coverage File chr11 (127 of 244)

Coverage File chr11 (128 of 244)

Coverage File chr11 (129 of 244)

Coverage File chr11 (130 of 244)

Coverage File chr11 (131 of 244)

Coverage File chr11 (132 of 244)

Coverage File chr11 (133 of 244)

Coverage File chr11 (134 of 244)

Coverage File chr11 (135 of 244)

Coverage File chr11 (136 of 244)

Coverage File chr11 (137 of 244)

Coverage File chr11 (138 of 244)

Coverage File chr11 (139 of 244)

Coverage File chr11 (140 of 244)

Coverage File chr11 (141 of 244)

Coverage File chr11 (142 of 244)

Coverage File chr11 (143 of 244)

Coverage File chr11 (144 of 244)

Coverage File chr11 (145 of 244)

Coverage File chr11 (146 of 244)

Coverage File chr11 (147 of 244)

Coverage File chr11 (148 of 244)

Coverage File chr11 (149 of 244)

Coverage File chr11 (150 of 244)

Coverage File chr11 (151 of 244)

Coverage File chr11 (152 of 244)

Coverage File chr11 (153 of 244)

Coverage File chr11 (154 of 244)

Coverage File chr11 (155 of 244)

Coverage File chr11 (156 of 244)

Coverage File chr11 (157 of 244)

Coverage File chr11 (158 of 244)

Coverage File chr11 (159 of 244)

Coverage File chr11 (160 of 244)

Coverage File chr11 (161 of 244)

Coverage File chr11 (162 of 244)

Coverage File chr11 (163 of 244)

Coverage File chr11 (164 of 244)

Coverage File chr11 (165 of 244)

Coverage File chr11 (166 of 244)

Coverage File chr11 (167 of 244)

Coverage File chr11 (168 of 244)

Coverage File chr11 (169 of 244)

Coverage File chr11 (170 of 244)

Coverage File chr11 (171 of 244)

Coverage File chr11 (172 of 244)

Coverage File chr11 (173 of 244)

Coverage File chr11 (174 of 244)

Coverage File chr11 (175 of 244)

Coverage File chr11 (176 of 244)

Coverage File chr11 (177 of 244)

Coverage File chr11 (178 of 244)

Coverage File chr11 (179 of 244)

Coverage File chr11 (180 of 244)

Coverage File chr11 (181 of 244)

Coverage File chr11 (182 of 244)

Coverage File chr11 (183 of 244)

Coverage File chr11 (184 of 244)

Coverage File chr11 (185 of 244)

Coverage File chr11 (186 of 244)

Coverage File chr11 (187 of 244)

Coverage File chr11 (188 of 244)

Coverage File chr11 (189 of 244)

Coverage File chr11 (190 of 244)

Coverage File chr11 (191 of 244)

Coverage File chr11 (192 of 244)

Coverage File chr11 (193 of 244)

Coverage File chr11 (194 of 244)

Coverage File chr11 (195 of 244)

Coverage File chr11 (196 of 244)

Coverage File chr11 (197 of 244)

Coverage File chr11 (198 of 244)

Coverage File chr11 (199 of 244)

Coverage File chr11 (200 of 244)

Coverage File chr11 (201 of 244)

Coverage File chr11 (202 of 244)

Coverage File chr11 (203 of 244)

Coverage File chr11 (204 of 244)

Coverage File chr11 (205 of 244)

Coverage File chr11 (206 of 244)

Coverage File chr11 (207 of 244)

Coverage File chr11 (208 of 244)

Coverage File chr11 (209 of 244)

Coverage File chr11 (210 of 244)

Coverage File chr11 (211 of 244)

Coverage File chr11 (212 of 244)

Coverage File chr11 (213 of 244)

Coverage File chr11 (214 of 244)

Coverage File chr11 (215 of 244)

Coverage File chr11 (216 of 244)

Coverage File chr11 (217 of 244)

Coverage File chr11 (218 of 244)

Coverage File chr11 (219 of 244)

Coverage File chr11 (220 of 244)

Coverage File chr11 (221 of 244)

Coverage File chr11 (222 of 244)

Coverage File chr11 (223 of 244)

Coverage File chr11 (224 of 244)

Coverage File chr11 (225 of 244)

Coverage File chr11 (226 of 244)

Coverage File chr11 (227 of 244)

Coverage File chr11 (228 of 244)

Coverage File chr11 (229 of 244)

Coverage File chr11 (230 of 244)

Coverage File chr11 (231 of 244)

Coverage File chr11 (232 of 244)

Coverage File chr11 (233 of 244)

Coverage File chr11 (234 of 244)

Coverage File chr11 (235 of 244)

Coverage File chr11 (236 of 244)

Coverage File chr11 (237 of 244)

Coverage File chr11 (238 of 244)

Coverage File chr11 (239 of 244)

Coverage File chr11 (240 of 244)

Coverage File chr11 (241 of 244)

Coverage File chr11 (242 of 244)

Coverage File chr11 (243 of 244)

Coverage File chr11 (244 of 244)

Kmer Bias chr12 (4 of 21)

chr12 
Coverage File chr12 (1 of 244)

Coverage File chr12 (2 of 244)

Coverage File chr12 (3 of 244)

Coverage File chr12 (4 of 244)

Coverage File chr12 (5 of 244)

Coverage File chr12 (6 of 244)

Coverage File chr12 (7 of 244)

Coverage File chr12 (8 of 244)

Coverage File chr12 (9 of 244)

Coverage File chr12 (10 of 244)

Coverage File chr12 (11 of 244)

Coverage File chr12 (12 of 244)

Coverage File chr12 (13 of 244)

Coverage File chr12 (14 of 244)

Coverage File chr12 (15 of 244)

Coverage File chr12 (16 of 244)

Coverage File chr12 (17 of 244)

Coverage File chr12 (18 of 244)

Coverage File chr12 (19 of 244)

Coverage File chr12 (20 of 244)

Coverage File chr12 (21 of 244)

Coverage File chr12 (22 of 244)

Coverage File chr12 (23 of 244)

Coverage File chr12 (24 of 244)

Coverage File chr12 (25 of 244)

Coverage File chr12 (26 of 244)

Coverage File chr12 (27 of 244)

Coverage File chr12 (28 of 244)

Coverage File chr12 (29 of 244)

Coverage File chr12 (30 of 244)

Coverage File chr12 (31 of 244)

Coverage File chr12 (32 of 244)

Coverage File chr12 (33 of 244)

Coverage File chr12 (34 of 244)

Coverage File chr12 (35 of 244)

Coverage File chr12 (36 of 244)

Coverage File chr12 (37 of 244)

Coverage File chr12 (38 of 244)

Coverage File chr12 (39 of 244)

Coverage File chr12 (40 of 244)

Coverage File chr12 (41 of 244)

Coverage File chr12 (42 of 244)

Coverage File chr12 (43 of 244)

Coverage File chr12 (44 of 244)

Coverage File chr12 (45 of 244)

Coverage File chr12 (46 of 244)

Coverage File chr12 (47 of 244)

Coverage File chr12 (48 of 244)

Coverage File chr12 (49 of 244)

Coverage File chr12 (50 of 244)

Coverage File chr12 (51 of 244)

Coverage File chr12 (52 of 244)

Coverage File chr12 (53 of 244)

Coverage File chr12 (54 of 244)

Coverage File chr12 (55 of 244)

Coverage File chr12 (56 of 244)

Coverage File chr12 (57 of 244)

Coverage File chr12 (58 of 244)

Coverage File chr12 (59 of 244)

Coverage File chr12 (60 of 244)

Coverage File chr12 (61 of 244)

Coverage File chr12 (62 of 244)

Coverage File chr12 (63 of 244)

Coverage File chr12 (64 of 244)

Coverage File chr12 (65 of 244)

Coverage File chr12 (66 of 244)

Coverage File chr12 (67 of 244)

Coverage File chr12 (68 of 244)

Coverage File chr12 (69 of 244)

Coverage File chr12 (70 of 244)

Coverage File chr12 (71 of 244)

Coverage File chr12 (72 of 244)

Coverage File chr12 (73 of 244)

Coverage File chr12 (74 of 244)

Coverage File chr12 (75 of 244)

Coverage File chr12 (76 of 244)

Coverage File chr12 (77 of 244)

Coverage File chr12 (78 of 244)

Coverage File chr12 (79 of 244)

Coverage File chr12 (80 of 244)

Coverage File chr12 (81 of 244)

Coverage File chr12 (82 of 244)

Coverage File chr12 (83 of 244)

Coverage File chr12 (84 of 244)

Coverage File chr12 (85 of 244)

Coverage File chr12 (86 of 244)

Coverage File chr12 (87 of 244)

Coverage File chr12 (88 of 244)

Coverage File chr12 (89 of 244)

Coverage File chr12 (90 of 244)

Coverage File chr12 (91 of 244)

Coverage File chr12 (92 of 244)

Coverage File chr12 (93 of 244)

Coverage File chr12 (94 of 244)

Coverage File chr12 (95 of 244)

Coverage File chr12 (96 of 244)

Coverage File chr12 (97 of 244)

Coverage File chr12 (98 of 244)

Coverage File chr12 (99 of 244)

Coverage File chr12 (100 of 244)

Coverage File chr12 (101 of 244)

Coverage File chr12 (102 of 244)

Coverage File chr12 (103 of 244)

Coverage File chr12 (104 of 244)

Coverage File chr12 (105 of 244)

Coverage File chr12 (106 of 244)

Coverage File chr12 (107 of 244)

Coverage File chr12 (108 of 244)

Coverage File chr12 (109 of 244)

Coverage File chr12 (110 of 244)

Coverage File chr12 (111 of 244)

Coverage File chr12 (112 of 244)

Coverage File chr12 (113 of 244)

Coverage File chr12 (114 of 244)

Coverage File chr12 (115 of 244)

Coverage File chr12 (116 of 244)

Coverage File chr12 (117 of 244)

Coverage File chr12 (118 of 244)

Coverage File chr12 (119 of 244)

Coverage File chr12 (120 of 244)

Coverage File chr12 (121 of 244)

Coverage File chr12 (122 of 244)

Coverage File chr12 (123 of 244)

Coverage File chr12 (124 of 244)

Coverage File chr12 (125 of 244)

Coverage File chr12 (126 of 244)

Coverage File chr12 (127 of 244)

Coverage File chr12 (128 of 244)

Coverage File chr12 (129 of 244)

Coverage File chr12 (130 of 244)

Coverage File chr12 (131 of 244)

Coverage File chr12 (132 of 244)

Coverage File chr12 (133 of 244)

Coverage File chr12 (134 of 244)

Coverage File chr12 (135 of 244)

Coverage File chr12 (136 of 244)

Coverage File chr12 (137 of 244)

Coverage File chr12 (138 of 244)

Coverage File chr12 (139 of 244)

Coverage File chr12 (140 of 244)

Coverage File chr12 (141 of 244)

Coverage File chr12 (142 of 244)

Coverage File chr12 (143 of 244)

Coverage File chr12 (144 of 244)

Coverage File chr12 (145 of 244)

Coverage File chr12 (146 of 244)

Coverage File chr12 (147 of 244)

Coverage File chr12 (148 of 244)

Coverage File chr12 (149 of 244)

Coverage File chr12 (150 of 244)

Coverage File chr12 (151 of 244)

Coverage File chr12 (152 of 244)

Coverage File chr12 (153 of 244)

Coverage File chr12 (154 of 244)

Coverage File chr12 (155 of 244)

Coverage File chr12 (156 of 244)

Coverage File chr12 (157 of 244)

Coverage File chr12 (158 of 244)

Coverage File chr12 (159 of 244)

Coverage File chr12 (160 of 244)

Coverage File chr12 (161 of 244)

Coverage File chr12 (162 of 244)

Coverage File chr12 (163 of 244)

Coverage File chr12 (164 of 244)

Coverage File chr12 (165 of 244)

Coverage File chr12 (166 of 244)

Coverage File chr12 (167 of 244)

Coverage File chr12 (168 of 244)

Coverage File chr12 (169 of 244)

Coverage File chr12 (170 of 244)

Coverage File chr12 (171 of 244)

Coverage File chr12 (172 of 244)

Coverage File chr12 (173 of 244)

Coverage File chr12 (174 of 244)

Coverage File chr12 (175 of 244)

Coverage File chr12 (176 of 244)

Coverage File chr12 (177 of 244)

Coverage File chr12 (178 of 244)

Coverage File chr12 (179 of 244)

Coverage File chr12 (180 of 244)

Coverage File chr12 (181 of 244)

Coverage File chr12 (182 of 244)

Coverage File chr12 (183 of 244)

Coverage File chr12 (184 of 244)

Coverage File chr12 (185 of 244)

Coverage File chr12 (186 of 244)

Coverage File chr12 (187 of 244)

Coverage File chr12 (188 of 244)

Coverage File chr12 (189 of 244)

Coverage File chr12 (190 of 244)

Coverage File chr12 (191 of 244)

Coverage File chr12 (192 of 244)

Coverage File chr12 (193 of 244)

Coverage File chr12 (194 of 244)

Coverage File chr12 (195 of 244)

Coverage File chr12 (196 of 244)

Coverage File chr12 (197 of 244)

Coverage File chr12 (198 of 244)

Coverage File chr12 (199 of 244)

Coverage File chr12 (200 of 244)

Coverage File chr12 (201 of 244)

Coverage File chr12 (202 of 244)

Coverage File chr12 (203 of 244)

Coverage File chr12 (204 of 244)

Coverage File chr12 (205 of 244)

Coverage File chr12 (206 of 244)

Coverage File chr12 (207 of 244)

Coverage File chr12 (208 of 244)

Coverage File chr12 (209 of 244)

Coverage File chr12 (210 of 244)

Coverage File chr12 (211 of 244)

Coverage File chr12 (212 of 244)

Coverage File chr12 (213 of 244)

Coverage File chr12 (214 of 244)

Coverage File chr12 (215 of 244)

Coverage File chr12 (216 of 244)

Coverage File chr12 (217 of 244)

Coverage File chr12 (218 of 244)

Coverage File chr12 (219 of 244)

Coverage File chr12 (220 of 244)

Coverage File chr12 (221 of 244)

Coverage File chr12 (222 of 244)

Coverage File chr12 (223 of 244)

Coverage File chr12 (224 of 244)

Coverage File chr12 (225 of 244)

Coverage File chr12 (226 of 244)

Coverage File chr12 (227 of 244)

Coverage File chr12 (228 of 244)

Coverage File chr12 (229 of 244)

Coverage File chr12 (230 of 244)

Coverage File chr12 (231 of 244)

Coverage File chr12 (232 of 244)

Coverage File chr12 (233 of 244)

Coverage File chr12 (234 of 244)

Coverage File chr12 (235 of 244)

Coverage File chr12 (236 of 244)

Coverage File chr12 (237 of 244)

Coverage File chr12 (238 of 244)

Coverage File chr12 (239 of 244)

Coverage File chr12 (240 of 244)

Coverage File chr12 (241 of 244)

Coverage File chr12 (242 of 244)

Coverage File chr12 (243 of 244)

Coverage File chr12 (244 of 244)

Kmer Bias chr13 (5 of 21)

chr13 
Coverage File chr13 (1 of 244)

Coverage File chr13 (2 of 244)

Coverage File chr13 (3 of 244)

Coverage File chr13 (4 of 244)

Coverage File chr13 (5 of 244)

Coverage File chr13 (6 of 244)

Coverage File chr13 (7 of 244)

Coverage File chr13 (8 of 244)

Coverage File chr13 (9 of 244)

Coverage File chr13 (10 of 244)

Coverage File chr13 (11 of 244)

Coverage File chr13 (12 of 244)

Coverage File chr13 (13 of 244)

Coverage File chr13 (14 of 244)

Coverage File chr13 (15 of 244)

Coverage File chr13 (16 of 244)

Coverage File chr13 (17 of 244)

Coverage File chr13 (18 of 244)

Coverage File chr13 (19 of 244)

Coverage File chr13 (20 of 244)

Coverage File chr13 (21 of 244)

Coverage File chr13 (22 of 244)

Coverage File chr13 (23 of 244)

Coverage File chr13 (24 of 244)

Coverage File chr13 (25 of 244)

Coverage File chr13 (26 of 244)

Coverage File chr13 (27 of 244)

Coverage File chr13 (28 of 244)

Coverage File chr13 (29 of 244)

Coverage File chr13 (30 of 244)

Coverage File chr13 (31 of 244)

Coverage File chr13 (32 of 244)

Coverage File chr13 (33 of 244)

Coverage File chr13 (34 of 244)

Coverage File chr13 (35 of 244)

Coverage File chr13 (36 of 244)

Coverage File chr13 (37 of 244)

Coverage File chr13 (38 of 244)

Coverage File chr13 (39 of 244)

Coverage File chr13 (40 of 244)

Coverage File chr13 (41 of 244)

Coverage File chr13 (42 of 244)

Coverage File chr13 (43 of 244)

Coverage File chr13 (44 of 244)

Coverage File chr13 (45 of 244)

Coverage File chr13 (46 of 244)

Coverage File chr13 (47 of 244)

Coverage File chr13 (48 of 244)

Coverage File chr13 (49 of 244)

Coverage File chr13 (50 of 244)

Coverage File chr13 (51 of 244)

Coverage File chr13 (52 of 244)

Coverage File chr13 (53 of 244)

Coverage File chr13 (54 of 244)

Coverage File chr13 (55 of 244)

Coverage File chr13 (56 of 244)

Coverage File chr13 (57 of 244)

Coverage File chr13 (58 of 244)

Coverage File chr13 (59 of 244)

Coverage File chr13 (60 of 244)

Coverage File chr13 (61 of 244)

Coverage File chr13 (62 of 244)

Coverage File chr13 (63 of 244)

Coverage File chr13 (64 of 244)

Coverage File chr13 (65 of 244)

Coverage File chr13 (66 of 244)

Coverage File chr13 (67 of 244)

Coverage File chr13 (68 of 244)

Coverage File chr13 (69 of 244)

Coverage File chr13 (70 of 244)

Coverage File chr13 (71 of 244)

Coverage File chr13 (72 of 244)

Coverage File chr13 (73 of 244)

Coverage File chr13 (74 of 244)

Coverage File chr13 (75 of 244)

Coverage File chr13 (76 of 244)

Coverage File chr13 (77 of 244)

Coverage File chr13 (78 of 244)

Coverage File chr13 (79 of 244)

Coverage File chr13 (80 of 244)

Coverage File chr13 (81 of 244)

Coverage File chr13 (82 of 244)

Coverage File chr13 (83 of 244)

Coverage File chr13 (84 of 244)

Coverage File chr13 (85 of 244)

Coverage File chr13 (86 of 244)

Coverage File chr13 (87 of 244)

Coverage File chr13 (88 of 244)

Coverage File chr13 (89 of 244)

Coverage File chr13 (90 of 244)

Coverage File chr13 (91 of 244)

Coverage File chr13 (92 of 244)

Coverage File chr13 (93 of 244)

Coverage File chr13 (94 of 244)

Coverage File chr13 (95 of 244)

Coverage File chr13 (96 of 244)

Coverage File chr13 (97 of 244)

Coverage File chr13 (98 of 244)

Coverage File chr13 (99 of 244)

Coverage File chr13 (100 of 244)

Coverage File chr13 (101 of 244)

Coverage File chr13 (102 of 244)

Coverage File chr13 (103 of 244)

Coverage File chr13 (104 of 244)

Coverage File chr13 (105 of 244)

Coverage File chr13 (106 of 244)

Coverage File chr13 (107 of 244)

Coverage File chr13 (108 of 244)

Coverage File chr13 (109 of 244)

Coverage File chr13 (110 of 244)

Coverage File chr13 (111 of 244)

Coverage File chr13 (112 of 244)

Coverage File chr13 (113 of 244)

Coverage File chr13 (114 of 244)

Coverage File chr13 (115 of 244)

Coverage File chr13 (116 of 244)

Coverage File chr13 (117 of 244)

Coverage File chr13 (118 of 244)

Coverage File chr13 (119 of 244)

Coverage File chr13 (120 of 244)

Coverage File chr13 (121 of 244)

Coverage File chr13 (122 of 244)

Coverage File chr13 (123 of 244)

Coverage File chr13 (124 of 244)

Coverage File chr13 (125 of 244)

Coverage File chr13 (126 of 244)

Coverage File chr13 (127 of 244)

Coverage File chr13 (128 of 244)

Coverage File chr13 (129 of 244)

Coverage File chr13 (130 of 244)

Coverage File chr13 (131 of 244)

Coverage File chr13 (132 of 244)

Coverage File chr13 (133 of 244)

Coverage File chr13 (134 of 244)

Coverage File chr13 (135 of 244)

Coverage File chr13 (136 of 244)

Coverage File chr13 (137 of 244)

Coverage File chr13 (138 of 244)

Coverage File chr13 (139 of 244)

Coverage File chr13 (140 of 244)

Coverage File chr13 (141 of 244)

Coverage File chr13 (142 of 244)

Coverage File chr13 (143 of 244)

Coverage File chr13 (144 of 244)

Coverage File chr13 (145 of 244)

Coverage File chr13 (146 of 244)

Coverage File chr13 (147 of 244)

Coverage File chr13 (148 of 244)

Coverage File chr13 (149 of 244)

Coverage File chr13 (150 of 244)

Coverage File chr13 (151 of 244)

Coverage File chr13 (152 of 244)

Coverage File chr13 (153 of 244)

Coverage File chr13 (154 of 244)

Coverage File chr13 (155 of 244)

Coverage File chr13 (156 of 244)

Coverage File chr13 (157 of 244)

Coverage File chr13 (158 of 244)

Coverage File chr13 (159 of 244)

Coverage File chr13 (160 of 244)

Coverage File chr13 (161 of 244)

Coverage File chr13 (162 of 244)

Coverage File chr13 (163 of 244)

Coverage File chr13 (164 of 244)

Coverage File chr13 (165 of 244)

Coverage File chr13 (166 of 244)

Coverage File chr13 (167 of 244)

Coverage File chr13 (168 of 244)

Coverage File chr13 (169 of 244)

Coverage File chr13 (170 of 244)

Coverage File chr13 (171 of 244)

Coverage File chr13 (172 of 244)

Coverage File chr13 (173 of 244)

Coverage File chr13 (174 of 244)

Coverage File chr13 (175 of 244)

Coverage File chr13 (176 of 244)

Coverage File chr13 (177 of 244)

Coverage File chr13 (178 of 244)

Coverage File chr13 (179 of 244)

Coverage File chr13 (180 of 244)

Coverage File chr13 (181 of 244)

Coverage File chr13 (182 of 244)

Coverage File chr13 (183 of 244)

Coverage File chr13 (184 of 244)

Coverage File chr13 (185 of 244)

Coverage File chr13 (186 of 244)

Coverage File chr13 (187 of 244)

Coverage File chr13 (188 of 244)

Coverage File chr13 (189 of 244)

Coverage File chr13 (190 of 244)

Coverage File chr13 (191 of 244)

Coverage File chr13 (192 of 244)

Coverage File chr13 (193 of 244)

Coverage File chr13 (194 of 244)

Coverage File chr13 (195 of 244)

Coverage File chr13 (196 of 244)

Coverage File chr13 (197 of 244)

Coverage File chr13 (198 of 244)

Coverage File chr13 (199 of 244)

Coverage File chr13 (200 of 244)

Coverage File chr13 (201 of 244)

Coverage File chr13 (202 of 244)

Coverage File chr13 (203 of 244)

Coverage File chr13 (204 of 244)

Coverage File chr13 (205 of 244)

Coverage File chr13 (206 of 244)

Coverage File chr13 (207 of 244)

Coverage File chr13 (208 of 244)

Coverage File chr13 (209 of 244)

Coverage File chr13 (210 of 244)

Coverage File chr13 (211 of 244)

Coverage File chr13 (212 of 244)

Coverage File chr13 (213 of 244)

Coverage File chr13 (214 of 244)

Coverage File chr13 (215 of 244)

Coverage File chr13 (216 of 244)

Coverage File chr13 (217 of 244)

Coverage File chr13 (218 of 244)

Coverage File chr13 (219 of 244)

Coverage File chr13 (220 of 244)

Coverage File chr13 (221 of 244)

Coverage File chr13 (222 of 244)

Coverage File chr13 (223 of 244)

Coverage File chr13 (224 of 244)

Coverage File chr13 (225 of 244)

Coverage File chr13 (226 of 244)

Coverage File chr13 (227 of 244)

Coverage File chr13 (228 of 244)

Coverage File chr13 (229 of 244)

Coverage File chr13 (230 of 244)

Coverage File chr13 (231 of 244)

Coverage File chr13 (232 of 244)

Coverage File chr13 (233 of 244)

Coverage File chr13 (234 of 244)

Coverage File chr13 (235 of 244)

Coverage File chr13 (236 of 244)

Coverage File chr13 (237 of 244)

Coverage File chr13 (238 of 244)

Coverage File chr13 (239 of 244)

Coverage File chr13 (240 of 244)

Coverage File chr13 (241 of 244)

Coverage File chr13 (242 of 244)

Coverage File chr13 (243 of 244)

Coverage File chr13 (244 of 244)

Kmer Bias chr14 (6 of 21)

chr14 
Coverage File chr14 (1 of 244)

Coverage File chr14 (2 of 244)

Coverage File chr14 (3 of 244)

Coverage File chr14 (4 of 244)

Coverage File chr14 (5 of 244)

Coverage File chr14 (6 of 244)

Coverage File chr14 (7 of 244)

Coverage File chr14 (8 of 244)

Coverage File chr14 (9 of 244)

Coverage File chr14 (10 of 244)

Coverage File chr14 (11 of 244)

Coverage File chr14 (12 of 244)

Coverage File chr14 (13 of 244)

Coverage File chr14 (14 of 244)

Coverage File chr14 (15 of 244)

Coverage File chr14 (16 of 244)

Coverage File chr14 (17 of 244)

Coverage File chr14 (18 of 244)

Coverage File chr14 (19 of 244)

Coverage File chr14 (20 of 244)

Coverage File chr14 (21 of 244)

Coverage File chr14 (22 of 244)

Coverage File chr14 (23 of 244)

Coverage File chr14 (24 of 244)

Coverage File chr14 (25 of 244)

Coverage File chr14 (26 of 244)

Coverage File chr14 (27 of 244)

Coverage File chr14 (28 of 244)

Coverage File chr14 (29 of 244)

Coverage File chr14 (30 of 244)

Coverage File chr14 (31 of 244)

Coverage File chr14 (32 of 244)

Coverage File chr14 (33 of 244)

Coverage File chr14 (34 of 244)

Coverage File chr14 (35 of 244)

Coverage File chr14 (36 of 244)

Coverage File chr14 (37 of 244)

Coverage File chr14 (38 of 244)

Coverage File chr14 (39 of 244)

Coverage File chr14 (40 of 244)

Coverage File chr14 (41 of 244)

Coverage File chr14 (42 of 244)

Coverage File chr14 (43 of 244)

Coverage File chr14 (44 of 244)

Coverage File chr14 (45 of 244)

Coverage File chr14 (46 of 244)

Coverage File chr14 (47 of 244)

Coverage File chr14 (48 of 244)

Coverage File chr14 (49 of 244)

Coverage File chr14 (50 of 244)

Coverage File chr14 (51 of 244)

Coverage File chr14 (52 of 244)

Coverage File chr14 (53 of 244)

Coverage File chr14 (54 of 244)

Coverage File chr14 (55 of 244)

Coverage File chr14 (56 of 244)

Coverage File chr14 (57 of 244)

Coverage File chr14 (58 of 244)

Coverage File chr14 (59 of 244)

Coverage File chr14 (60 of 244)

Coverage File chr14 (61 of 244)

Coverage File chr14 (62 of 244)

Coverage File chr14 (63 of 244)

Coverage File chr14 (64 of 244)

Coverage File chr14 (65 of 244)

Coverage File chr14 (66 of 244)

Coverage File chr14 (67 of 244)

Coverage File chr14 (68 of 244)

Coverage File chr14 (69 of 244)

Coverage File chr14 (70 of 244)

Coverage File chr14 (71 of 244)

Coverage File chr14 (72 of 244)

Coverage File chr14 (73 of 244)

Coverage File chr14 (74 of 244)

Coverage File chr14 (75 of 244)

Coverage File chr14 (76 of 244)

Coverage File chr14 (77 of 244)

Coverage File chr14 (78 of 244)

Coverage File chr14 (79 of 244)

Coverage File chr14 (80 of 244)

Coverage File chr14 (81 of 244)

Coverage File chr14 (82 of 244)

Coverage File chr14 (83 of 244)

Coverage File chr14 (84 of 244)

Coverage File chr14 (85 of 244)

Coverage File chr14 (86 of 244)

Coverage File chr14 (87 of 244)

Coverage File chr14 (88 of 244)

Coverage File chr14 (89 of 244)

Coverage File chr14 (90 of 244)

Coverage File chr14 (91 of 244)

Coverage File chr14 (92 of 244)

Coverage File chr14 (93 of 244)

Coverage File chr14 (94 of 244)

Coverage File chr14 (95 of 244)

Coverage File chr14 (96 of 244)

Coverage File chr14 (97 of 244)

Coverage File chr14 (98 of 244)

Coverage File chr14 (99 of 244)

Coverage File chr14 (100 of 244)

Coverage File chr14 (101 of 244)

Coverage File chr14 (102 of 244)

Coverage File chr14 (103 of 244)

Coverage File chr14 (104 of 244)

Coverage File chr14 (105 of 244)

Coverage File chr14 (106 of 244)

Coverage File chr14 (107 of 244)

Coverage File chr14 (108 of 244)

Coverage File chr14 (109 of 244)

Coverage File chr14 (110 of 244)

Coverage File chr14 (111 of 244)

Coverage File chr14 (112 of 244)

Coverage File chr14 (113 of 244)

Coverage File chr14 (114 of 244)

Coverage File chr14 (115 of 244)

Coverage File chr14 (116 of 244)

Coverage File chr14 (117 of 244)

Coverage File chr14 (118 of 244)

Coverage File chr14 (119 of 244)

Coverage File chr14 (120 of 244)

Coverage File chr14 (121 of 244)

Coverage File chr14 (122 of 244)

Coverage File chr14 (123 of 244)

Coverage File chr14 (124 of 244)

Coverage File chr14 (125 of 244)

Coverage File chr14 (126 of 244)

Coverage File chr14 (127 of 244)

Coverage File chr14 (128 of 244)

Coverage File chr14 (129 of 244)

Coverage File chr14 (130 of 244)

Coverage File chr14 (131 of 244)

Coverage File chr14 (132 of 244)

Coverage File chr14 (133 of 244)

Coverage File chr14 (134 of 244)

Coverage File chr14 (135 of 244)

Coverage File chr14 (136 of 244)

Coverage File chr14 (137 of 244)

Coverage File chr14 (138 of 244)

Coverage File chr14 (139 of 244)

Coverage File chr14 (140 of 244)

Coverage File chr14 (141 of 244)

Coverage File chr14 (142 of 244)

Coverage File chr14 (143 of 244)

Coverage File chr14 (144 of 244)

Coverage File chr14 (145 of 244)

Coverage File chr14 (146 of 244)

Coverage File chr14 (147 of 244)

Coverage File chr14 (148 of 244)

Coverage File chr14 (149 of 244)

Coverage File chr14 (150 of 244)

Coverage File chr14 (151 of 244)

Coverage File chr14 (152 of 244)

Coverage File chr14 (153 of 244)

Coverage File chr14 (154 of 244)

Coverage File chr14 (155 of 244)

Coverage File chr14 (156 of 244)

Coverage File chr14 (157 of 244)

Coverage File chr14 (158 of 244)

Coverage File chr14 (159 of 244)

Coverage File chr14 (160 of 244)

Coverage File chr14 (161 of 244)

Coverage File chr14 (162 of 244)

Coverage File chr14 (163 of 244)

Coverage File chr14 (164 of 244)

Coverage File chr14 (165 of 244)

Coverage File chr14 (166 of 244)

Coverage File chr14 (167 of 244)

Coverage File chr14 (168 of 244)

Coverage File chr14 (169 of 244)

Coverage File chr14 (170 of 244)

Coverage File chr14 (171 of 244)

Coverage File chr14 (172 of 244)

Coverage File chr14 (173 of 244)

Coverage File chr14 (174 of 244)

Coverage File chr14 (175 of 244)

Coverage File chr14 (176 of 244)

Coverage File chr14 (177 of 244)

Coverage File chr14 (178 of 244)

Coverage File chr14 (179 of 244)

Coverage File chr14 (180 of 244)

Coverage File chr14 (181 of 244)

Coverage File chr14 (182 of 244)

Coverage File chr14 (183 of 244)

Coverage File chr14 (184 of 244)

Coverage File chr14 (185 of 244)

Coverage File chr14 (186 of 244)

Coverage File chr14 (187 of 244)

Coverage File chr14 (188 of 244)

Coverage File chr14 (189 of 244)

Coverage File chr14 (190 of 244)

Coverage File chr14 (191 of 244)

Coverage File chr14 (192 of 244)

Coverage File chr14 (193 of 244)

Coverage File chr14 (194 of 244)

Coverage File chr14 (195 of 244)

Coverage File chr14 (196 of 244)

Coverage File chr14 (197 of 244)

Coverage File chr14 (198 of 244)

Coverage File chr14 (199 of 244)

Coverage File chr14 (200 of 244)

Coverage File chr14 (201 of 244)

Coverage File chr14 (202 of 244)

Coverage File chr14 (203 of 244)

Coverage File chr14 (204 of 244)

Coverage File chr14 (205 of 244)

Coverage File chr14 (206 of 244)

Coverage File chr14 (207 of 244)

Coverage File chr14 (208 of 244)

Coverage File chr14 (209 of 244)

Coverage File chr14 (210 of 244)

Coverage File chr14 (211 of 244)

Coverage File chr14 (212 of 244)

Coverage File chr14 (213 of 244)

Coverage File chr14 (214 of 244)

Coverage File chr14 (215 of 244)

Coverage File chr14 (216 of 244)

Coverage File chr14 (217 of 244)

Coverage File chr14 (218 of 244)

Coverage File chr14 (219 of 244)

Coverage File chr14 (220 of 244)

Coverage File chr14 (221 of 244)

Coverage File chr14 (222 of 244)

Coverage File chr14 (223 of 244)

Coverage File chr14 (224 of 244)

Coverage File chr14 (225 of 244)

Coverage File chr14 (226 of 244)

Coverage File chr14 (227 of 244)

Coverage File chr14 (228 of 244)

Coverage File chr14 (229 of 244)

Coverage File chr14 (230 of 244)

Coverage File chr14 (231 of 244)

Coverage File chr14 (232 of 244)

Coverage File chr14 (233 of 244)

Coverage File chr14 (234 of 244)

Coverage File chr14 (235 of 244)

Coverage File chr14 (236 of 244)

Coverage File chr14 (237 of 244)

Coverage File chr14 (238 of 244)

Coverage File chr14 (239 of 244)

Coverage File chr14 (240 of 244)

Coverage File chr14 (241 of 244)

Coverage File chr14 (242 of 244)

Coverage File chr14 (243 of 244)

Coverage File chr14 (244 of 244)

Kmer Bias chr15 (7 of 21)

chr15 
Coverage File chr15 (1 of 244)

Coverage File chr15 (2 of 244)

Coverage File chr15 (3 of 244)

Coverage File chr15 (4 of 244)

Coverage File chr15 (5 of 244)

Coverage File chr15 (6 of 244)

Coverage File chr15 (7 of 244)

Coverage File chr15 (8 of 244)

Coverage File chr15 (9 of 244)

Coverage File chr15 (10 of 244)

Coverage File chr15 (11 of 244)

Coverage File chr15 (12 of 244)

Coverage File chr15 (13 of 244)

Coverage File chr15 (14 of 244)

Coverage File chr15 (15 of 244)

Coverage File chr15 (16 of 244)

Coverage File chr15 (17 of 244)

Coverage File chr15 (18 of 244)

Coverage File chr15 (19 of 244)

Coverage File chr15 (20 of 244)

Coverage File chr15 (21 of 244)

Coverage File chr15 (22 of 244)

Coverage File chr15 (23 of 244)

Coverage File chr15 (24 of 244)

Coverage File chr15 (25 of 244)

Coverage File chr15 (26 of 244)

Coverage File chr15 (27 of 244)

Coverage File chr15 (28 of 244)

Coverage File chr15 (29 of 244)

Coverage File chr15 (30 of 244)

Coverage File chr15 (31 of 244)

Coverage File chr15 (32 of 244)

Coverage File chr15 (33 of 244)

Coverage File chr15 (34 of 244)

Coverage File chr15 (35 of 244)

Coverage File chr15 (36 of 244)

Coverage File chr15 (37 of 244)

Coverage File chr15 (38 of 244)

Coverage File chr15 (39 of 244)

Coverage File chr15 (40 of 244)

Coverage File chr15 (41 of 244)

Coverage File chr15 (42 of 244)

Coverage File chr15 (43 of 244)

Coverage File chr15 (44 of 244)

Coverage File chr15 (45 of 244)

Coverage File chr15 (46 of 244)

Coverage File chr15 (47 of 244)

Coverage File chr15 (48 of 244)

Coverage File chr15 (49 of 244)

Coverage File chr15 (50 of 244)

Coverage File chr15 (51 of 244)

Coverage File chr15 (52 of 244)

Coverage File chr15 (53 of 244)

Coverage File chr15 (54 of 244)

Coverage File chr15 (55 of 244)

Coverage File chr15 (56 of 244)

Coverage File chr15 (57 of 244)

Coverage File chr15 (58 of 244)

Coverage File chr15 (59 of 244)

Coverage File chr15 (60 of 244)

Coverage File chr15 (61 of 244)

Coverage File chr15 (62 of 244)

Coverage File chr15 (63 of 244)

Coverage File chr15 (64 of 244)

Coverage File chr15 (65 of 244)

Coverage File chr15 (66 of 244)

Coverage File chr15 (67 of 244)

Coverage File chr15 (68 of 244)

Coverage File chr15 (69 of 244)

Coverage File chr15 (70 of 244)

Coverage File chr15 (71 of 244)

Coverage File chr15 (72 of 244)

Coverage File chr15 (73 of 244)

Coverage File chr15 (74 of 244)

Coverage File chr15 (75 of 244)

Coverage File chr15 (76 of 244)

Coverage File chr15 (77 of 244)

Coverage File chr15 (78 of 244)

Coverage File chr15 (79 of 244)

Coverage File chr15 (80 of 244)

Coverage File chr15 (81 of 244)

Coverage File chr15 (82 of 244)

Coverage File chr15 (83 of 244)

Coverage File chr15 (84 of 244)

Coverage File chr15 (85 of 244)

Coverage File chr15 (86 of 244)

Coverage File chr15 (87 of 244)

Coverage File chr15 (88 of 244)

Coverage File chr15 (89 of 244)

Coverage File chr15 (90 of 244)

Coverage File chr15 (91 of 244)

Coverage File chr15 (92 of 244)

Coverage File chr15 (93 of 244)

Coverage File chr15 (94 of 244)

Coverage File chr15 (95 of 244)

Coverage File chr15 (96 of 244)

Coverage File chr15 (97 of 244)

Coverage File chr15 (98 of 244)

Coverage File chr15 (99 of 244)

Coverage File chr15 (100 of 244)

Coverage File chr15 (101 of 244)

Coverage File chr15 (102 of 244)

Coverage File chr15 (103 of 244)

Coverage File chr15 (104 of 244)

Coverage File chr15 (105 of 244)

Coverage File chr15 (106 of 244)

Coverage File chr15 (107 of 244)

Coverage File chr15 (108 of 244)

Coverage File chr15 (109 of 244)

Coverage File chr15 (110 of 244)

Coverage File chr15 (111 of 244)

Coverage File chr15 (112 of 244)

Coverage File chr15 (113 of 244)

Coverage File chr15 (114 of 244)

Coverage File chr15 (115 of 244)

Coverage File chr15 (116 of 244)

Coverage File chr15 (117 of 244)

Coverage File chr15 (118 of 244)

Coverage File chr15 (119 of 244)

Coverage File chr15 (120 of 244)

Coverage File chr15 (121 of 244)

Coverage File chr15 (122 of 244)

Coverage File chr15 (123 of 244)

Coverage File chr15 (124 of 244)

Coverage File chr15 (125 of 244)

Coverage File chr15 (126 of 244)

Coverage File chr15 (127 of 244)

Coverage File chr15 (128 of 244)

Coverage File chr15 (129 of 244)

Coverage File chr15 (130 of 244)

Coverage File chr15 (131 of 244)

Coverage File chr15 (132 of 244)

Coverage File chr15 (133 of 244)

Coverage File chr15 (134 of 244)

Coverage File chr15 (135 of 244)

Coverage File chr15 (136 of 244)

Coverage File chr15 (137 of 244)

Coverage File chr15 (138 of 244)

Coverage File chr15 (139 of 244)

Coverage File chr15 (140 of 244)

Coverage File chr15 (141 of 244)

Coverage File chr15 (142 of 244)

Coverage File chr15 (143 of 244)

Coverage File chr15 (144 of 244)

Coverage File chr15 (145 of 244)

Coverage File chr15 (146 of 244)

Coverage File chr15 (147 of 244)

Coverage File chr15 (148 of 244)

Coverage File chr15 (149 of 244)

Coverage File chr15 (150 of 244)

Coverage File chr15 (151 of 244)

Coverage File chr15 (152 of 244)

Coverage File chr15 (153 of 244)

Coverage File chr15 (154 of 244)

Coverage File chr15 (155 of 244)

Coverage File chr15 (156 of 244)

Coverage File chr15 (157 of 244)

Coverage File chr15 (158 of 244)

Coverage File chr15 (159 of 244)

Coverage File chr15 (160 of 244)

Coverage File chr15 (161 of 244)

Coverage File chr15 (162 of 244)

Coverage File chr15 (163 of 244)

Coverage File chr15 (164 of 244)

Coverage File chr15 (165 of 244)

Coverage File chr15 (166 of 244)

Coverage File chr15 (167 of 244)

Coverage File chr15 (168 of 244)

Coverage File chr15 (169 of 244)

Coverage File chr15 (170 of 244)

Coverage File chr15 (171 of 244)

Coverage File chr15 (172 of 244)

Coverage File chr15 (173 of 244)

Coverage File chr15 (174 of 244)

Coverage File chr15 (175 of 244)

Coverage File chr15 (176 of 244)

Coverage File chr15 (177 of 244)

Coverage File chr15 (178 of 244)

Coverage File chr15 (179 of 244)

Coverage File chr15 (180 of 244)

Coverage File chr15 (181 of 244)

Coverage File chr15 (182 of 244)

Coverage File chr15 (183 of 244)

Coverage File chr15 (184 of 244)

Coverage File chr15 (185 of 244)

Coverage File chr15 (186 of 244)

Coverage File chr15 (187 of 244)

Coverage File chr15 (188 of 244)

Coverage File chr15 (189 of 244)

Coverage File chr15 (190 of 244)

Coverage File chr15 (191 of 244)

Coverage File chr15 (192 of 244)

Coverage File chr15 (193 of 244)

Coverage File chr15 (194 of 244)

Coverage File chr15 (195 of 244)

Coverage File chr15 (196 of 244)

Coverage File chr15 (197 of 244)

Coverage File chr15 (198 of 244)

Coverage File chr15 (199 of 244)

Coverage File chr15 (200 of 244)

Coverage File chr15 (201 of 244)

Coverage File chr15 (202 of 244)

Coverage File chr15 (203 of 244)

Coverage File chr15 (204 of 244)

Coverage File chr15 (205 of 244)

Coverage File chr15 (206 of 244)

Coverage File chr15 (207 of 244)

Coverage File chr15 (208 of 244)

Coverage File chr15 (209 of 244)

Coverage File chr15 (210 of 244)

Coverage File chr15 (211 of 244)

Coverage File chr15 (212 of 244)

Coverage File chr15 (213 of 244)

Coverage File chr15 (214 of 244)

Coverage File chr15 (215 of 244)

Coverage File chr15 (216 of 244)

Coverage File chr15 (217 of 244)

Coverage File chr15 (218 of 244)

Coverage File chr15 (219 of 244)

Coverage File chr15 (220 of 244)

Coverage File chr15 (221 of 244)

Coverage File chr15 (222 of 244)

Coverage File chr15 (223 of 244)

Coverage File chr15 (224 of 244)

Coverage File chr15 (225 of 244)

Coverage File chr15 (226 of 244)

Coverage File chr15 (227 of 244)

Coverage File chr15 (228 of 244)

Coverage File chr15 (229 of 244)

Coverage File chr15 (230 of 244)

Coverage File chr15 (231 of 244)

Coverage File chr15 (232 of 244)

Coverage File chr15 (233 of 244)

Coverage File chr15 (234 of 244)

Coverage File chr15 (235 of 244)

Coverage File chr15 (236 of 244)

Coverage File chr15 (237 of 244)

Coverage File chr15 (238 of 244)

Coverage File chr15 (239 of 244)

Coverage File chr15 (240 of 244)

Coverage File chr15 (241 of 244)

Coverage File chr15 (242 of 244)

Coverage File chr15 (243 of 244)

Coverage File chr15 (244 of 244)

Kmer Bias chr16 (8 of 21)

chr16 
Coverage File chr16 (1 of 244)

Coverage File chr16 (2 of 244)

Coverage File chr16 (3 of 244)

Coverage File chr16 (4 of 244)

Coverage File chr16 (5 of 244)

Coverage File chr16 (6 of 244)

Coverage File chr16 (7 of 244)

Coverage File chr16 (8 of 244)

Coverage File chr16 (9 of 244)

Coverage File chr16 (10 of 244)

Coverage File chr16 (11 of 244)

Coverage File chr16 (12 of 244)

Coverage File chr16 (13 of 244)

Coverage File chr16 (14 of 244)

Coverage File chr16 (15 of 244)

Coverage File chr16 (16 of 244)

Coverage File chr16 (17 of 244)

Coverage File chr16 (18 of 244)

Coverage File chr16 (19 of 244)

Coverage File chr16 (20 of 244)

Coverage File chr16 (21 of 244)

Coverage File chr16 (22 of 244)

Coverage File chr16 (23 of 244)

Coverage File chr16 (24 of 244)

Coverage File chr16 (25 of 244)

Coverage File chr16 (26 of 244)

Coverage File chr16 (27 of 244)

Coverage File chr16 (28 of 244)

Coverage File chr16 (29 of 244)

Coverage File chr16 (30 of 244)

Coverage File chr16 (31 of 244)

Coverage File chr16 (32 of 244)

Coverage File chr16 (33 of 244)

Coverage File chr16 (34 of 244)

Coverage File chr16 (35 of 244)

Coverage File chr16 (36 of 244)

Coverage File chr16 (37 of 244)

Coverage File chr16 (38 of 244)

Coverage File chr16 (39 of 244)

Coverage File chr16 (40 of 244)

Coverage File chr16 (41 of 244)

Coverage File chr16 (42 of 244)

Coverage File chr16 (43 of 244)

Coverage File chr16 (44 of 244)

Coverage File chr16 (45 of 244)

Coverage File chr16 (46 of 244)

Coverage File chr16 (47 of 244)

Coverage File chr16 (48 of 244)

Coverage File chr16 (49 of 244)

Coverage File chr16 (50 of 244)

Coverage File chr16 (51 of 244)

Coverage File chr16 (52 of 244)

Coverage File chr16 (53 of 244)

Coverage File chr16 (54 of 244)

Coverage File chr16 (55 of 244)

Coverage File chr16 (56 of 244)

Coverage File chr16 (57 of 244)

Coverage File chr16 (58 of 244)

Coverage File chr16 (59 of 244)

Coverage File chr16 (60 of 244)

Coverage File chr16 (61 of 244)

Coverage File chr16 (62 of 244)

Coverage File chr16 (63 of 244)

Coverage File chr16 (64 of 244)

Coverage File chr16 (65 of 244)

Coverage File chr16 (66 of 244)

Coverage File chr16 (67 of 244)

Coverage File chr16 (68 of 244)

Coverage File chr16 (69 of 244)

Coverage File chr16 (70 of 244)

Coverage File chr16 (71 of 244)

Coverage File chr16 (72 of 244)

Coverage File chr16 (73 of 244)

Coverage File chr16 (74 of 244)

Coverage File chr16 (75 of 244)

Coverage File chr16 (76 of 244)

Coverage File chr16 (77 of 244)

Coverage File chr16 (78 of 244)

Coverage File chr16 (79 of 244)

Coverage File chr16 (80 of 244)

Coverage File chr16 (81 of 244)

Coverage File chr16 (82 of 244)

Coverage File chr16 (83 of 244)

Coverage File chr16 (84 of 244)

Coverage File chr16 (85 of 244)

Coverage File chr16 (86 of 244)

Coverage File chr16 (87 of 244)

Coverage File chr16 (88 of 244)

Coverage File chr16 (89 of 244)

Coverage File chr16 (90 of 244)

Coverage File chr16 (91 of 244)

Coverage File chr16 (92 of 244)

Coverage File chr16 (93 of 244)

Coverage File chr16 (94 of 244)

Coverage File chr16 (95 of 244)

Coverage File chr16 (96 of 244)

Coverage File chr16 (97 of 244)

Coverage File chr16 (98 of 244)

Coverage File chr16 (99 of 244)

Coverage File chr16 (100 of 244)

Coverage File chr16 (101 of 244)

Coverage File chr16 (102 of 244)

Coverage File chr16 (103 of 244)

Coverage File chr16 (104 of 244)

Coverage File chr16 (105 of 244)

Coverage File chr16 (106 of 244)

Coverage File chr16 (107 of 244)

Coverage File chr16 (108 of 244)

Coverage File chr16 (109 of 244)

Coverage File chr16 (110 of 244)

Coverage File chr16 (111 of 244)

Coverage File chr16 (112 of 244)

Coverage File chr16 (113 of 244)

Coverage File chr16 (114 of 244)

Coverage File chr16 (115 of 244)

Coverage File chr16 (116 of 244)

Coverage File chr16 (117 of 244)

Coverage File chr16 (118 of 244)

Coverage File chr16 (119 of 244)

Coverage File chr16 (120 of 244)

Coverage File chr16 (121 of 244)

Coverage File chr16 (122 of 244)

Coverage File chr16 (123 of 244)

Coverage File chr16 (124 of 244)

Coverage File chr16 (125 of 244)

Coverage File chr16 (126 of 244)

Coverage File chr16 (127 of 244)

Coverage File chr16 (128 of 244)

Coverage File chr16 (129 of 244)

Coverage File chr16 (130 of 244)

Coverage File chr16 (131 of 244)

Coverage File chr16 (132 of 244)

Coverage File chr16 (133 of 244)

Coverage File chr16 (134 of 244)

Coverage File chr16 (135 of 244)

Coverage File chr16 (136 of 244)

Coverage File chr16 (137 of 244)

Coverage File chr16 (138 of 244)

Coverage File chr16 (139 of 244)

Coverage File chr16 (140 of 244)

Coverage File chr16 (141 of 244)

Coverage File chr16 (142 of 244)

Coverage File chr16 (143 of 244)

Coverage File chr16 (144 of 244)

Coverage File chr16 (145 of 244)

Coverage File chr16 (146 of 244)

Coverage File chr16 (147 of 244)

Coverage File chr16 (148 of 244)

Coverage File chr16 (149 of 244)

Coverage File chr16 (150 of 244)

Coverage File chr16 (151 of 244)

Coverage File chr16 (152 of 244)

Coverage File chr16 (153 of 244)

Coverage File chr16 (154 of 244)

Coverage File chr16 (155 of 244)

Coverage File chr16 (156 of 244)

Coverage File chr16 (157 of 244)

Coverage File chr16 (158 of 244)

Coverage File chr16 (159 of 244)

Coverage File chr16 (160 of 244)

Coverage File chr16 (161 of 244)

Coverage File chr16 (162 of 244)

Coverage File chr16 (163 of 244)

Coverage File chr16 (164 of 244)

Coverage File chr16 (165 of 244)

Coverage File chr16 (166 of 244)

Coverage File chr16 (167 of 244)

Coverage File chr16 (168 of 244)

Coverage File chr16 (169 of 244)

Coverage File chr16 (170 of 244)

Coverage File chr16 (171 of 244)

Coverage File chr16 (172 of 244)

Coverage File chr16 (173 of 244)

Coverage File chr16 (174 of 244)

Coverage File chr16 (175 of 244)

Coverage File chr16 (176 of 244)

Coverage File chr16 (177 of 244)

Coverage File chr16 (178 of 244)

Coverage File chr16 (179 of 244)

Coverage File chr16 (180 of 244)

Coverage File chr16 (181 of 244)

Coverage File chr16 (182 of 244)

Coverage File chr16 (183 of 244)

Coverage File chr16 (184 of 244)

Coverage File chr16 (185 of 244)

Coverage File chr16 (186 of 244)

Coverage File chr16 (187 of 244)

Coverage File chr16 (188 of 244)

Coverage File chr16 (189 of 244)

Coverage File chr16 (190 of 244)

Coverage File chr16 (191 of 244)

Coverage File chr16 (192 of 244)

Coverage File chr16 (193 of 244)

Coverage File chr16 (194 of 244)

Coverage File chr16 (195 of 244)

Coverage File chr16 (196 of 244)

Coverage File chr16 (197 of 244)

Coverage File chr16 (198 of 244)

Coverage File chr16 (199 of 244)

Coverage File chr16 (200 of 244)

Coverage File chr16 (201 of 244)

Coverage File chr16 (202 of 244)

Coverage File chr16 (203 of 244)

Coverage File chr16 (204 of 244)

Coverage File chr16 (205 of 244)

Coverage File chr16 (206 of 244)

Coverage File chr16 (207 of 244)

Coverage File chr16 (208 of 244)

Coverage File chr16 (209 of 244)

Coverage File chr16 (210 of 244)

Coverage File chr16 (211 of 244)

Coverage File chr16 (212 of 244)

Coverage File chr16 (213 of 244)

Coverage File chr16 (214 of 244)

Coverage File chr16 (215 of 244)

Coverage File chr16 (216 of 244)

Coverage File chr16 (217 of 244)

Coverage File chr16 (218 of 244)

Coverage File chr16 (219 of 244)

Coverage File chr16 (220 of 244)

Coverage File chr16 (221 of 244)

Coverage File chr16 (222 of 244)

Coverage File chr16 (223 of 244)

Coverage File chr16 (224 of 244)

Coverage File chr16 (225 of 244)

Coverage File chr16 (226 of 244)

Coverage File chr16 (227 of 244)

Coverage File chr16 (228 of 244)

Coverage File chr16 (229 of 244)

Coverage File chr16 (230 of 244)

Coverage File chr16 (231 of 244)

Coverage File chr16 (232 of 244)

Coverage File chr16 (233 of 244)

Coverage File chr16 (234 of 244)

Coverage File chr16 (235 of 244)

Coverage File chr16 (236 of 244)

Coverage File chr16 (237 of 244)

Coverage File chr16 (238 of 244)

Coverage File chr16 (239 of 244)

Coverage File chr16 (240 of 244)

Coverage File chr16 (241 of 244)

Coverage File chr16 (242 of 244)

Coverage File chr16 (243 of 244)

Coverage File chr16 (244 of 244)

Kmer Bias chr17 (9 of 21)

chr17 
Coverage File chr17 (1 of 244)

Coverage File chr17 (2 of 244)

Coverage File chr17 (3 of 244)

Coverage File chr17 (4 of 244)

Coverage File chr17 (5 of 244)

Coverage File chr17 (6 of 244)

Coverage File chr17 (7 of 244)

Coverage File chr17 (8 of 244)

Coverage File chr17 (9 of 244)

Coverage File chr17 (10 of 244)

Coverage File chr17 (11 of 244)

Coverage File chr17 (12 of 244)

Coverage File chr17 (13 of 244)

Coverage File chr17 (14 of 244)

Coverage File chr17 (15 of 244)

Coverage File chr17 (16 of 244)

Coverage File chr17 (17 of 244)

Coverage File chr17 (18 of 244)

Coverage File chr17 (19 of 244)

Coverage File chr17 (20 of 244)

Coverage File chr17 (21 of 244)

Coverage File chr17 (22 of 244)

Coverage File chr17 (23 of 244)

Coverage File chr17 (24 of 244)

Coverage File chr17 (25 of 244)

Coverage File chr17 (26 of 244)

Coverage File chr17 (27 of 244)

Coverage File chr17 (28 of 244)

Coverage File chr17 (29 of 244)

Coverage File chr17 (30 of 244)

Coverage File chr17 (31 of 244)

Coverage File chr17 (32 of 244)

Coverage File chr17 (33 of 244)

Coverage File chr17 (34 of 244)

Coverage File chr17 (35 of 244)

Coverage File chr17 (36 of 244)

Coverage File chr17 (37 of 244)

Coverage File chr17 (38 of 244)

Coverage File chr17 (39 of 244)

Coverage File chr17 (40 of 244)

Coverage File chr17 (41 of 244)

Coverage File chr17 (42 of 244)

Coverage File chr17 (43 of 244)

Coverage File chr17 (44 of 244)

Coverage File chr17 (45 of 244)

Coverage File chr17 (46 of 244)

Coverage File chr17 (47 of 244)

Coverage File chr17 (48 of 244)

Coverage File chr17 (49 of 244)

Coverage File chr17 (50 of 244)

Coverage File chr17 (51 of 244)

Coverage File chr17 (52 of 244)

Coverage File chr17 (53 of 244)

Coverage File chr17 (54 of 244)

Coverage File chr17 (55 of 244)

Coverage File chr17 (56 of 244)

Coverage File chr17 (57 of 244)

Coverage File chr17 (58 of 244)

Coverage File chr17 (59 of 244)

Coverage File chr17 (60 of 244)

Coverage File chr17 (61 of 244)

Coverage File chr17 (62 of 244)

Coverage File chr17 (63 of 244)

Coverage File chr17 (64 of 244)

Coverage File chr17 (65 of 244)

Coverage File chr17 (66 of 244)

Coverage File chr17 (67 of 244)

Coverage File chr17 (68 of 244)

Coverage File chr17 (69 of 244)

Coverage File chr17 (70 of 244)

Coverage File chr17 (71 of 244)

Coverage File chr17 (72 of 244)

Coverage File chr17 (73 of 244)

Coverage File chr17 (74 of 244)

Coverage File chr17 (75 of 244)

Coverage File chr17 (76 of 244)

Coverage File chr17 (77 of 244)

Coverage File chr17 (78 of 244)

Coverage File chr17 (79 of 244)

Coverage File chr17 (80 of 244)

Coverage File chr17 (81 of 244)

Coverage File chr17 (82 of 244)

Coverage File chr17 (83 of 244)

Coverage File chr17 (84 of 244)

Coverage File chr17 (85 of 244)

Coverage File chr17 (86 of 244)

Coverage File chr17 (87 of 244)

Coverage File chr17 (88 of 244)

Coverage File chr17 (89 of 244)

Coverage File chr17 (90 of 244)

Coverage File chr17 (91 of 244)

Coverage File chr17 (92 of 244)

Coverage File chr17 (93 of 244)

Coverage File chr17 (94 of 244)

Coverage File chr17 (95 of 244)

Coverage File chr17 (96 of 244)

Coverage File chr17 (97 of 244)

Coverage File chr17 (98 of 244)

Coverage File chr17 (99 of 244)

Coverage File chr17 (100 of 244)

Coverage File chr17 (101 of 244)

Coverage File chr17 (102 of 244)

Coverage File chr17 (103 of 244)

Coverage File chr17 (104 of 244)

Coverage File chr17 (105 of 244)

Coverage File chr17 (106 of 244)

Coverage File chr17 (107 of 244)

Coverage File chr17 (108 of 244)

Coverage File chr17 (109 of 244)

Coverage File chr17 (110 of 244)

Coverage File chr17 (111 of 244)

Coverage File chr17 (112 of 244)

Coverage File chr17 (113 of 244)

Coverage File chr17 (114 of 244)

Coverage File chr17 (115 of 244)

Coverage File chr17 (116 of 244)

Coverage File chr17 (117 of 244)

Coverage File chr17 (118 of 244)

Coverage File chr17 (119 of 244)

Coverage File chr17 (120 of 244)

Coverage File chr17 (121 of 244)

Coverage File chr17 (122 of 244)

Coverage File chr17 (123 of 244)

Coverage File chr17 (124 of 244)

Coverage File chr17 (125 of 244)

Coverage File chr17 (126 of 244)

Coverage File chr17 (127 of 244)

Coverage File chr17 (128 of 244)

Coverage File chr17 (129 of 244)

Coverage File chr17 (130 of 244)

Coverage File chr17 (131 of 244)

Coverage File chr17 (132 of 244)

Coverage File chr17 (133 of 244)

Coverage File chr17 (134 of 244)

Coverage File chr17 (135 of 244)

Coverage File chr17 (136 of 244)

Coverage File chr17 (137 of 244)

Coverage File chr17 (138 of 244)

Coverage File chr17 (139 of 244)

Coverage File chr17 (140 of 244)

Coverage File chr17 (141 of 244)

Coverage File chr17 (142 of 244)

Coverage File chr17 (143 of 244)

Coverage File chr17 (144 of 244)

Coverage File chr17 (145 of 244)

Coverage File chr17 (146 of 244)

Coverage File chr17 (147 of 244)

Coverage File chr17 (148 of 244)

Coverage File chr17 (149 of 244)

Coverage File chr17 (150 of 244)

Coverage File chr17 (151 of 244)

Coverage File chr17 (152 of 244)

Coverage File chr17 (153 of 244)

Coverage File chr17 (154 of 244)

Coverage File chr17 (155 of 244)

Coverage File chr17 (156 of 244)

Coverage File chr17 (157 of 244)

Coverage File chr17 (158 of 244)

Coverage File chr17 (159 of 244)

Coverage File chr17 (160 of 244)

Coverage File chr17 (161 of 244)

Coverage File chr17 (162 of 244)

Coverage File chr17 (163 of 244)

Coverage File chr17 (164 of 244)

Coverage File chr17 (165 of 244)

Coverage File chr17 (166 of 244)

Coverage File chr17 (167 of 244)

Coverage File chr17 (168 of 244)

Coverage File chr17 (169 of 244)

Coverage File chr17 (170 of 244)

Coverage File chr17 (171 of 244)

Coverage File chr17 (172 of 244)

Coverage File chr17 (173 of 244)

Coverage File chr17 (174 of 244)

Coverage File chr17 (175 of 244)

Coverage File chr17 (176 of 244)

Coverage File chr17 (177 of 244)

Coverage File chr17 (178 of 244)

Coverage File chr17 (179 of 244)

Coverage File chr17 (180 of 244)

Coverage File chr17 (181 of 244)

Coverage File chr17 (182 of 244)

Coverage File chr17 (183 of 244)

Coverage File chr17 (184 of 244)

Coverage File chr17 (185 of 244)

Coverage File chr17 (186 of 244)

Coverage File chr17 (187 of 244)

Coverage File chr17 (188 of 244)

Coverage File chr17 (189 of 244)

Coverage File chr17 (190 of 244)

Coverage File chr17 (191 of 244)

Coverage File chr17 (192 of 244)

Coverage File chr17 (193 of 244)

Coverage File chr17 (194 of 244)

Coverage File chr17 (195 of 244)

Coverage File chr17 (196 of 244)

Coverage File chr17 (197 of 244)

Coverage File chr17 (198 of 244)

Coverage File chr17 (199 of 244)

Coverage File chr17 (200 of 244)

Coverage File chr17 (201 of 244)

Coverage File chr17 (202 of 244)

Coverage File chr17 (203 of 244)

Coverage File chr17 (204 of 244)

Coverage File chr17 (205 of 244)

Coverage File chr17 (206 of 244)

Coverage File chr17 (207 of 244)

Coverage File chr17 (208 of 244)

Coverage File chr17 (209 of 244)

Coverage File chr17 (210 of 244)

Coverage File chr17 (211 of 244)

Coverage File chr17 (212 of 244)

Coverage File chr17 (213 of 244)

Coverage File chr17 (214 of 244)

Coverage File chr17 (215 of 244)

Coverage File chr17 (216 of 244)

Coverage File chr17 (217 of 244)

Coverage File chr17 (218 of 244)

Coverage File chr17 (219 of 244)

Coverage File chr17 (220 of 244)

Coverage File chr17 (221 of 244)

Coverage File chr17 (222 of 244)

Coverage File chr17 (223 of 244)

Coverage File chr17 (224 of 244)

Coverage File chr17 (225 of 244)

Coverage File chr17 (226 of 244)

Coverage File chr17 (227 of 244)

Coverage File chr17 (228 of 244)

Coverage File chr17 (229 of 244)

Coverage File chr17 (230 of 244)

Coverage File chr17 (231 of 244)

Coverage File chr17 (232 of 244)

Coverage File chr17 (233 of 244)

Coverage File chr17 (234 of 244)

Coverage File chr17 (235 of 244)

Coverage File chr17 (236 of 244)

Coverage File chr17 (237 of 244)

Coverage File chr17 (238 of 244)

Coverage File chr17 (239 of 244)

Coverage File chr17 (240 of 244)

Coverage File chr17 (241 of 244)

Coverage File chr17 (242 of 244)

Coverage File chr17 (243 of 244)

Coverage File chr17 (244 of 244)

Kmer Bias chr18 (10 of 21)

chr18 
Coverage File chr18 (1 of 244)

Coverage File chr18 (2 of 244)

Coverage File chr18 (3 of 244)

Coverage File chr18 (4 of 244)

Coverage File chr18 (5 of 244)

Coverage File chr18 (6 of 244)

Coverage File chr18 (7 of 244)

Coverage File chr18 (8 of 244)

Coverage File chr18 (9 of 244)

Coverage File chr18 (10 of 244)

Coverage File chr18 (11 of 244)

Coverage File chr18 (12 of 244)

Coverage File chr18 (13 of 244)

Coverage File chr18 (14 of 244)

Coverage File chr18 (15 of 244)

Coverage File chr18 (16 of 244)

Coverage File chr18 (17 of 244)

Coverage File chr18 (18 of 244)

Coverage File chr18 (19 of 244)

Coverage File chr18 (20 of 244)

Coverage File chr18 (21 of 244)

Coverage File chr18 (22 of 244)

Coverage File chr18 (23 of 244)

Coverage File chr18 (24 of 244)

Coverage File chr18 (25 of 244)

Coverage File chr18 (26 of 244)

Coverage File chr18 (27 of 244)

Coverage File chr18 (28 of 244)

Coverage File chr18 (29 of 244)

Coverage File chr18 (30 of 244)

Coverage File chr18 (31 of 244)

Coverage File chr18 (32 of 244)

Coverage File chr18 (33 of 244)

Coverage File chr18 (34 of 244)

Coverage File chr18 (35 of 244)

Coverage File chr18 (36 of 244)

Coverage File chr18 (37 of 244)

Coverage File chr18 (38 of 244)

Coverage File chr18 (39 of 244)

Coverage File chr18 (40 of 244)

Coverage File chr18 (41 of 244)

Coverage File chr18 (42 of 244)

Coverage File chr18 (43 of 244)

Coverage File chr18 (44 of 244)

Coverage File chr18 (45 of 244)

Coverage File chr18 (46 of 244)

Coverage File chr18 (47 of 244)

Coverage File chr18 (48 of 244)

Coverage File chr18 (49 of 244)

Coverage File chr18 (50 of 244)

Coverage File chr18 (51 of 244)

Coverage File chr18 (52 of 244)

Coverage File chr18 (53 of 244)

Coverage File chr18 (54 of 244)

Coverage File chr18 (55 of 244)

Coverage File chr18 (56 of 244)

Coverage File chr18 (57 of 244)

Coverage File chr18 (58 of 244)

Coverage File chr18 (59 of 244)

Coverage File chr18 (60 of 244)

Coverage File chr18 (61 of 244)

Coverage File chr18 (62 of 244)

Coverage File chr18 (63 of 244)

Coverage File chr18 (64 of 244)

Coverage File chr18 (65 of 244)

Coverage File chr18 (66 of 244)

Coverage File chr18 (67 of 244)

Coverage File chr18 (68 of 244)

Coverage File chr18 (69 of 244)

Coverage File chr18 (70 of 244)

Coverage File chr18 (71 of 244)

Coverage File chr18 (72 of 244)

Coverage File chr18 (73 of 244)

Coverage File chr18 (74 of 244)

Coverage File chr18 (75 of 244)

Coverage File chr18 (76 of 244)

Coverage File chr18 (77 of 244)

Coverage File chr18 (78 of 244)

Coverage File chr18 (79 of 244)

Coverage File chr18 (80 of 244)

Coverage File chr18 (81 of 244)

Coverage File chr18 (82 of 244)

Coverage File chr18 (83 of 244)

Coverage File chr18 (84 of 244)

Coverage File chr18 (85 of 244)

Coverage File chr18 (86 of 244)

Coverage File chr18 (87 of 244)

Coverage File chr18 (88 of 244)

Coverage File chr18 (89 of 244)

Coverage File chr18 (90 of 244)

Coverage File chr18 (91 of 244)

Coverage File chr18 (92 of 244)

Coverage File chr18 (93 of 244)

Coverage File chr18 (94 of 244)

Coverage File chr18 (95 of 244)

Coverage File chr18 (96 of 244)

Coverage File chr18 (97 of 244)

Coverage File chr18 (98 of 244)

Coverage File chr18 (99 of 244)

Coverage File chr18 (100 of 244)

Coverage File chr18 (101 of 244)

Coverage File chr18 (102 of 244)

Coverage File chr18 (103 of 244)

Coverage File chr18 (104 of 244)

Coverage File chr18 (105 of 244)

Coverage File chr18 (106 of 244)

Coverage File chr18 (107 of 244)

Coverage File chr18 (108 of 244)

Coverage File chr18 (109 of 244)

Coverage File chr18 (110 of 244)

Coverage File chr18 (111 of 244)

Coverage File chr18 (112 of 244)

Coverage File chr18 (113 of 244)

Coverage File chr18 (114 of 244)

Coverage File chr18 (115 of 244)

Coverage File chr18 (116 of 244)

Coverage File chr18 (117 of 244)

Coverage File chr18 (118 of 244)

Coverage File chr18 (119 of 244)

Coverage File chr18 (120 of 244)

Coverage File chr18 (121 of 244)

Coverage File chr18 (122 of 244)

Coverage File chr18 (123 of 244)

Coverage File chr18 (124 of 244)

Coverage File chr18 (125 of 244)

Coverage File chr18 (126 of 244)

Coverage File chr18 (127 of 244)

Coverage File chr18 (128 of 244)

Coverage File chr18 (129 of 244)

Coverage File chr18 (130 of 244)

Coverage File chr18 (131 of 244)

Coverage File chr18 (132 of 244)

Coverage File chr18 (133 of 244)

Coverage File chr18 (134 of 244)

Coverage File chr18 (135 of 244)

Coverage File chr18 (136 of 244)

Coverage File chr18 (137 of 244)

Coverage File chr18 (138 of 244)

Coverage File chr18 (139 of 244)

Coverage File chr18 (140 of 244)

Coverage File chr18 (141 of 244)

Coverage File chr18 (142 of 244)

Coverage File chr18 (143 of 244)

Coverage File chr18 (144 of 244)

Coverage File chr18 (145 of 244)

Coverage File chr18 (146 of 244)

Coverage File chr18 (147 of 244)

Coverage File chr18 (148 of 244)

Coverage File chr18 (149 of 244)

Coverage File chr18 (150 of 244)

Coverage File chr18 (151 of 244)

Coverage File chr18 (152 of 244)

Coverage File chr18 (153 of 244)

Coverage File chr18 (154 of 244)

Coverage File chr18 (155 of 244)

Coverage File chr18 (156 of 244)

Coverage File chr18 (157 of 244)

Coverage File chr18 (158 of 244)

Coverage File chr18 (159 of 244)

Coverage File chr18 (160 of 244)

Coverage File chr18 (161 of 244)

Coverage File chr18 (162 of 244)

Coverage File chr18 (163 of 244)

Coverage File chr18 (164 of 244)

Coverage File chr18 (165 of 244)

Coverage File chr18 (166 of 244)

Coverage File chr18 (167 of 244)

Coverage File chr18 (168 of 244)

Coverage File chr18 (169 of 244)

Coverage File chr18 (170 of 244)

Coverage File chr18 (171 of 244)

Coverage File chr18 (172 of 244)

Coverage File chr18 (173 of 244)

Coverage File chr18 (174 of 244)

Coverage File chr18 (175 of 244)

Coverage File chr18 (176 of 244)

Coverage File chr18 (177 of 244)

Coverage File chr18 (178 of 244)

Coverage File chr18 (179 of 244)

Coverage File chr18 (180 of 244)

Coverage File chr18 (181 of 244)

Coverage File chr18 (182 of 244)

Coverage File chr18 (183 of 244)

Coverage File chr18 (184 of 244)

Coverage File chr18 (185 of 244)

Coverage File chr18 (186 of 244)

Coverage File chr18 (187 of 244)

Coverage File chr18 (188 of 244)

Coverage File chr18 (189 of 244)

Coverage File chr18 (190 of 244)

Coverage File chr18 (191 of 244)

Coverage File chr18 (192 of 244)

Coverage File chr18 (193 of 244)

Coverage File chr18 (194 of 244)

Coverage File chr18 (195 of 244)

Coverage File chr18 (196 of 244)

Coverage File chr18 (197 of 244)

Coverage File chr18 (198 of 244)

Coverage File chr18 (199 of 244)

Coverage File chr18 (200 of 244)

Coverage File chr18 (201 of 244)

Coverage File chr18 (202 of 244)

Coverage File chr18 (203 of 244)

Coverage File chr18 (204 of 244)

Coverage File chr18 (205 of 244)

Coverage File chr18 (206 of 244)

Coverage File chr18 (207 of 244)

Coverage File chr18 (208 of 244)

Coverage File chr18 (209 of 244)

Coverage File chr18 (210 of 244)

Coverage File chr18 (211 of 244)

Coverage File chr18 (212 of 244)

Coverage File chr18 (213 of 244)

Coverage File chr18 (214 of 244)

Coverage File chr18 (215 of 244)

Coverage File chr18 (216 of 244)

Coverage File chr18 (217 of 244)

Coverage File chr18 (218 of 244)

Coverage File chr18 (219 of 244)

Coverage File chr18 (220 of 244)

Coverage File chr18 (221 of 244)

Coverage File chr18 (222 of 244)

Coverage File chr18 (223 of 244)

Coverage File chr18 (224 of 244)

Coverage File chr18 (225 of 244)

Coverage File chr18 (226 of 244)

Coverage File chr18 (227 of 244)

Coverage File chr18 (228 of 244)

Coverage File chr18 (229 of 244)

Coverage File chr18 (230 of 244)

Coverage File chr18 (231 of 244)

Coverage File chr18 (232 of 244)

Coverage File chr18 (233 of 244)

Coverage File chr18 (234 of 244)

Coverage File chr18 (235 of 244)

Coverage File chr18 (236 of 244)

Coverage File chr18 (237 of 244)

Coverage File chr18 (238 of 244)

Coverage File chr18 (239 of 244)

Coverage File chr18 (240 of 244)

Coverage File chr18 (241 of 244)

Coverage File chr18 (242 of 244)

Coverage File chr18 (243 of 244)

Coverage File chr18 (244 of 244)

Kmer Bias chr19 (11 of 21)

chr19 
Coverage File chr19 (1 of 244)

Coverage File chr19 (2 of 244)

Coverage File chr19 (3 of 244)

Coverage File chr19 (4 of 244)

Coverage File chr19 (5 of 244)

Coverage File chr19 (6 of 244)

Coverage File chr19 (7 of 244)

Coverage File chr19 (8 of 244)

Coverage File chr19 (9 of 244)

Coverage File chr19 (10 of 244)

Coverage File chr19 (11 of 244)

Coverage File chr19 (12 of 244)

Coverage File chr19 (13 of 244)

Coverage File chr19 (14 of 244)

Coverage File chr19 (15 of 244)

Coverage File chr19 (16 of 244)

Coverage File chr19 (17 of 244)

Coverage File chr19 (18 of 244)

Coverage File chr19 (19 of 244)

Coverage File chr19 (20 of 244)

Coverage File chr19 (21 of 244)

Coverage File chr19 (22 of 244)

Coverage File chr19 (23 of 244)

Coverage File chr19 (24 of 244)

Coverage File chr19 (25 of 244)

Coverage File chr19 (26 of 244)

Coverage File chr19 (27 of 244)

Coverage File chr19 (28 of 244)

Coverage File chr19 (29 of 244)

Coverage File chr19 (30 of 244)

Coverage File chr19 (31 of 244)

Coverage File chr19 (32 of 244)

Coverage File chr19 (33 of 244)

Coverage File chr19 (34 of 244)

Coverage File chr19 (35 of 244)

Coverage File chr19 (36 of 244)

Coverage File chr19 (37 of 244)

Coverage File chr19 (38 of 244)

Coverage File chr19 (39 of 244)

Coverage File chr19 (40 of 244)

Coverage File chr19 (41 of 244)

Coverage File chr19 (42 of 244)

Coverage File chr19 (43 of 244)

Coverage File chr19 (44 of 244)

Coverage File chr19 (45 of 244)

Coverage File chr19 (46 of 244)

Coverage File chr19 (47 of 244)

Coverage File chr19 (48 of 244)

Coverage File chr19 (49 of 244)

Coverage File chr19 (50 of 244)

Coverage File chr19 (51 of 244)

Coverage File chr19 (52 of 244)

Coverage File chr19 (53 of 244)

Coverage File chr19 (54 of 244)

Coverage File chr19 (55 of 244)

Coverage File chr19 (56 of 244)

Coverage File chr19 (57 of 244)

Coverage File chr19 (58 of 244)

Coverage File chr19 (59 of 244)

Coverage File chr19 (60 of 244)

Coverage File chr19 (61 of 244)

Coverage File chr19 (62 of 244)

Coverage File chr19 (63 of 244)

Coverage File chr19 (64 of 244)

Coverage File chr19 (65 of 244)

Coverage File chr19 (66 of 244)

Coverage File chr19 (67 of 244)

Coverage File chr19 (68 of 244)

Coverage File chr19 (69 of 244)

Coverage File chr19 (70 of 244)

Coverage File chr19 (71 of 244)

Coverage File chr19 (72 of 244)

Coverage File chr19 (73 of 244)

Coverage File chr19 (74 of 244)

Coverage File chr19 (75 of 244)

Coverage File chr19 (76 of 244)

Coverage File chr19 (77 of 244)

Coverage File chr19 (78 of 244)

Coverage File chr19 (79 of 244)

Coverage File chr19 (80 of 244)

Coverage File chr19 (81 of 244)

Coverage File chr19 (82 of 244)

Coverage File chr19 (83 of 244)

Coverage File chr19 (84 of 244)

Coverage File chr19 (85 of 244)

Coverage File chr19 (86 of 244)

Coverage File chr19 (87 of 244)

Coverage File chr19 (88 of 244)

Coverage File chr19 (89 of 244)

Coverage File chr19 (90 of 244)

Coverage File chr19 (91 of 244)

Coverage File chr19 (92 of 244)

Coverage File chr19 (93 of 244)

Coverage File chr19 (94 of 244)

Coverage File chr19 (95 of 244)

Coverage File chr19 (96 of 244)

Coverage File chr19 (97 of 244)

Coverage File chr19 (98 of 244)

Coverage File chr19 (99 of 244)

Coverage File chr19 (100 of 244)

Coverage File chr19 (101 of 244)

Coverage File chr19 (102 of 244)

Coverage File chr19 (103 of 244)

Coverage File chr19 (104 of 244)

Coverage File chr19 (105 of 244)

Coverage File chr19 (106 of 244)

Coverage File chr19 (107 of 244)

Coverage File chr19 (108 of 244)

Coverage File chr19 (109 of 244)

Coverage File chr19 (110 of 244)

Coverage File chr19 (111 of 244)

Coverage File chr19 (112 of 244)

Coverage File chr19 (113 of 244)

Coverage File chr19 (114 of 244)

Coverage File chr19 (115 of 244)

Coverage File chr19 (116 of 244)

Coverage File chr19 (117 of 244)

Coverage File chr19 (118 of 244)

Coverage File chr19 (119 of 244)

Coverage File chr19 (120 of 244)

Coverage File chr19 (121 of 244)

Coverage File chr19 (122 of 244)

Coverage File chr19 (123 of 244)

Coverage File chr19 (124 of 244)

Coverage File chr19 (125 of 244)

Coverage File chr19 (126 of 244)

Coverage File chr19 (127 of 244)

Coverage File chr19 (128 of 244)

Coverage File chr19 (129 of 244)

Coverage File chr19 (130 of 244)

Coverage File chr19 (131 of 244)

Coverage File chr19 (132 of 244)

Coverage File chr19 (133 of 244)

Coverage File chr19 (134 of 244)

Coverage File chr19 (135 of 244)

Coverage File chr19 (136 of 244)

Coverage File chr19 (137 of 244)

Coverage File chr19 (138 of 244)

Coverage File chr19 (139 of 244)

Coverage File chr19 (140 of 244)

Coverage File chr19 (141 of 244)

Coverage File chr19 (142 of 244)

Coverage File chr19 (143 of 244)

Coverage File chr19 (144 of 244)

Coverage File chr19 (145 of 244)

Coverage File chr19 (146 of 244)

Coverage File chr19 (147 of 244)

Coverage File chr19 (148 of 244)

Coverage File chr19 (149 of 244)

Coverage File chr19 (150 of 244)

Coverage File chr19 (151 of 244)

Coverage File chr19 (152 of 244)

Coverage File chr19 (153 of 244)

Coverage File chr19 (154 of 244)

Coverage File chr19 (155 of 244)

Coverage File chr19 (156 of 244)

Coverage File chr19 (157 of 244)

Coverage File chr19 (158 of 244)

Coverage File chr19 (159 of 244)

Coverage File chr19 (160 of 244)

Coverage File chr19 (161 of 244)

Coverage File chr19 (162 of 244)

Coverage File chr19 (163 of 244)

Coverage File chr19 (164 of 244)

Coverage File chr19 (165 of 244)

Coverage File chr19 (166 of 244)

Coverage File chr19 (167 of 244)

Coverage File chr19 (168 of 244)

Coverage File chr19 (169 of 244)

Coverage File chr19 (170 of 244)

Coverage File chr19 (171 of 244)

Coverage File chr19 (172 of 244)

Coverage File chr19 (173 of 244)

Coverage File chr19 (174 of 244)

Coverage File chr19 (175 of 244)

Coverage File chr19 (176 of 244)

Coverage File chr19 (177 of 244)

Coverage File chr19 (178 of 244)

Coverage File chr19 (179 of 244)

Coverage File chr19 (180 of 244)

Coverage File chr19 (181 of 244)

Coverage File chr19 (182 of 244)

Coverage File chr19 (183 of 244)

Coverage File chr19 (184 of 244)

Coverage File chr19 (185 of 244)

Coverage File chr19 (186 of 244)

Coverage File chr19 (187 of 244)

Coverage File chr19 (188 of 244)

Coverage File chr19 (189 of 244)

Coverage File chr19 (190 of 244)

Coverage File chr19 (191 of 244)

Coverage File chr19 (192 of 244)

Coverage File chr19 (193 of 244)

Coverage File chr19 (194 of 244)

Coverage File chr19 (195 of 244)

Coverage File chr19 (196 of 244)

Coverage File chr19 (197 of 244)

Coverage File chr19 (198 of 244)

Coverage File chr19 (199 of 244)

Coverage File chr19 (200 of 244)

Coverage File chr19 (201 of 244)

Coverage File chr19 (202 of 244)

Coverage File chr19 (203 of 244)

Coverage File chr19 (204 of 244)

Coverage File chr19 (205 of 244)

Coverage File chr19 (206 of 244)

Coverage File chr19 (207 of 244)

Coverage File chr19 (208 of 244)

Coverage File chr19 (209 of 244)

Coverage File chr19 (210 of 244)

Coverage File chr19 (211 of 244)

Coverage File chr19 (212 of 244)

Coverage File chr19 (213 of 244)

Coverage File chr19 (214 of 244)

Coverage File chr19 (215 of 244)

Coverage File chr19 (216 of 244)

Coverage File chr19 (217 of 244)

Coverage File chr19 (218 of 244)

Coverage File chr19 (219 of 244)

Coverage File chr19 (220 of 244)

Coverage File chr19 (221 of 244)

Coverage File chr19 (222 of 244)

Coverage File chr19 (223 of 244)

Coverage File chr19 (224 of 244)

Coverage File chr19 (225 of 244)

Coverage File chr19 (226 of 244)

Coverage File chr19 (227 of 244)

Coverage File chr19 (228 of 244)

Coverage File chr19 (229 of 244)

Coverage File chr19 (230 of 244)

Coverage File chr19 (231 of 244)

Coverage File chr19 (232 of 244)

Coverage File chr19 (233 of 244)

Coverage File chr19 (234 of 244)

Coverage File chr19 (235 of 244)

Coverage File chr19 (236 of 244)

Coverage File chr19 (237 of 244)

Coverage File chr19 (238 of 244)

Coverage File chr19 (239 of 244)

Coverage File chr19 (240 of 244)

Coverage File chr19 (241 of 244)

Coverage File chr19 (242 of 244)

Coverage File chr19 (243 of 244)

Coverage File chr19 (244 of 244)

Kmer Bias chr2 (12 of 21)

chr2 
Coverage File chr2 (1 of 244)

Coverage File chr2 (2 of 244)

Coverage File chr2 (3 of 244)

Coverage File chr2 (4 of 244)

Coverage File chr2 (5 of 244)

Coverage File chr2 (6 of 244)

Coverage File chr2 (7 of 244)

Coverage File chr2 (8 of 244)

Coverage File chr2 (9 of 244)

Coverage File chr2 (10 of 244)

Coverage File chr2 (11 of 244)

Coverage File chr2 (12 of 244)

Coverage File chr2 (13 of 244)

Coverage File chr2 (14 of 244)

Coverage File chr2 (15 of 244)

Coverage File chr2 (16 of 244)

Coverage File chr2 (17 of 244)

Coverage File chr2 (18 of 244)

Coverage File chr2 (19 of 244)

Coverage File chr2 (20 of 244)

Coverage File chr2 (21 of 244)

Coverage File chr2 (22 of 244)

Coverage File chr2 (23 of 244)

Coverage File chr2 (24 of 244)

Coverage File chr2 (25 of 244)

Coverage File chr2 (26 of 244)

Coverage File chr2 (27 of 244)

Coverage File chr2 (28 of 244)

Coverage File chr2 (29 of 244)

Coverage File chr2 (30 of 244)

Coverage File chr2 (31 of 244)

Coverage File chr2 (32 of 244)

Coverage File chr2 (33 of 244)

Coverage File chr2 (34 of 244)

Coverage File chr2 (35 of 244)

Coverage File chr2 (36 of 244)

Coverage File chr2 (37 of 244)

Coverage File chr2 (38 of 244)

Coverage File chr2 (39 of 244)

Coverage File chr2 (40 of 244)

Coverage File chr2 (41 of 244)

Coverage File chr2 (42 of 244)

Coverage File chr2 (43 of 244)

Coverage File chr2 (44 of 244)

Coverage File chr2 (45 of 244)

Coverage File chr2 (46 of 244)

Coverage File chr2 (47 of 244)

Coverage File chr2 (48 of 244)

Coverage File chr2 (49 of 244)

Coverage File chr2 (50 of 244)

Coverage File chr2 (51 of 244)

Coverage File chr2 (52 of 244)

Coverage File chr2 (53 of 244)

Coverage File chr2 (54 of 244)

Coverage File chr2 (55 of 244)

Coverage File chr2 (56 of 244)

Coverage File chr2 (57 of 244)

Coverage File chr2 (58 of 244)

Coverage File chr2 (59 of 244)

Coverage File chr2 (60 of 244)

Coverage File chr2 (61 of 244)

Coverage File chr2 (62 of 244)

Coverage File chr2 (63 of 244)

Coverage File chr2 (64 of 244)

Coverage File chr2 (65 of 244)

Coverage File chr2 (66 of 244)

Coverage File chr2 (67 of 244)

Coverage File chr2 (68 of 244)

Coverage File chr2 (69 of 244)

Coverage File chr2 (70 of 244)

Coverage File chr2 (71 of 244)

Coverage File chr2 (72 of 244)

Coverage File chr2 (73 of 244)

Coverage File chr2 (74 of 244)

Coverage File chr2 (75 of 244)

Coverage File chr2 (76 of 244)

Coverage File chr2 (77 of 244)

Coverage File chr2 (78 of 244)

Coverage File chr2 (79 of 244)

Coverage File chr2 (80 of 244)

Coverage File chr2 (81 of 244)

Coverage File chr2 (82 of 244)

Coverage File chr2 (83 of 244)

Coverage File chr2 (84 of 244)

Coverage File chr2 (85 of 244)

Coverage File chr2 (86 of 244)

Coverage File chr2 (87 of 244)

Coverage File chr2 (88 of 244)

Coverage File chr2 (89 of 244)

Coverage File chr2 (90 of 244)

Coverage File chr2 (91 of 244)

Coverage File chr2 (92 of 244)

Coverage File chr2 (93 of 244)

Coverage File chr2 (94 of 244)

Coverage File chr2 (95 of 244)

Coverage File chr2 (96 of 244)

Coverage File chr2 (97 of 244)

Coverage File chr2 (98 of 244)

Coverage File chr2 (99 of 244)

Coverage File chr2 (100 of 244)

Coverage File chr2 (101 of 244)

Coverage File chr2 (102 of 244)

Coverage File chr2 (103 of 244)

Coverage File chr2 (104 of 244)

Coverage File chr2 (105 of 244)

Coverage File chr2 (106 of 244)

Coverage File chr2 (107 of 244)

Coverage File chr2 (108 of 244)

Coverage File chr2 (109 of 244)

Coverage File chr2 (110 of 244)

Coverage File chr2 (111 of 244)

Coverage File chr2 (112 of 244)

Coverage File chr2 (113 of 244)

Coverage File chr2 (114 of 244)

Coverage File chr2 (115 of 244)

Coverage File chr2 (116 of 244)

Coverage File chr2 (117 of 244)

Coverage File chr2 (118 of 244)

Coverage File chr2 (119 of 244)

Coverage File chr2 (120 of 244)

Coverage File chr2 (121 of 244)

Coverage File chr2 (122 of 244)

Coverage File chr2 (123 of 244)

Coverage File chr2 (124 of 244)

Coverage File chr2 (125 of 244)

Coverage File chr2 (126 of 244)

Coverage File chr2 (127 of 244)

Coverage File chr2 (128 of 244)

Coverage File chr2 (129 of 244)

Coverage File chr2 (130 of 244)

Coverage File chr2 (131 of 244)

Coverage File chr2 (132 of 244)

Coverage File chr2 (133 of 244)

Coverage File chr2 (134 of 244)

Coverage File chr2 (135 of 244)

Coverage File chr2 (136 of 244)

Coverage File chr2 (137 of 244)

Coverage File chr2 (138 of 244)

Coverage File chr2 (139 of 244)

Coverage File chr2 (140 of 244)

Coverage File chr2 (141 of 244)

Coverage File chr2 (142 of 244)

Coverage File chr2 (143 of 244)

Coverage File chr2 (144 of 244)

Coverage File chr2 (145 of 244)

Coverage File chr2 (146 of 244)

Coverage File chr2 (147 of 244)

Coverage File chr2 (148 of 244)

Coverage File chr2 (149 of 244)

Coverage File chr2 (150 of 244)

Coverage File chr2 (151 of 244)

Coverage File chr2 (152 of 244)

Coverage File chr2 (153 of 244)

Coverage File chr2 (154 of 244)

Coverage File chr2 (155 of 244)

Coverage File chr2 (156 of 244)

Coverage File chr2 (157 of 244)

Coverage File chr2 (158 of 244)

Coverage File chr2 (159 of 244)

Coverage File chr2 (160 of 244)

Coverage File chr2 (161 of 244)

Coverage File chr2 (162 of 244)

Coverage File chr2 (163 of 244)

Coverage File chr2 (164 of 244)

Coverage File chr2 (165 of 244)

Coverage File chr2 (166 of 244)

Coverage File chr2 (167 of 244)

Coverage File chr2 (168 of 244)

Coverage File chr2 (169 of 244)

Coverage File chr2 (170 of 244)

Coverage File chr2 (171 of 244)

Coverage File chr2 (172 of 244)

Coverage File chr2 (173 of 244)

Coverage File chr2 (174 of 244)

Coverage File chr2 (175 of 244)

Coverage File chr2 (176 of 244)

Coverage File chr2 (177 of 244)

Coverage File chr2 (178 of 244)

Coverage File chr2 (179 of 244)

Coverage File chr2 (180 of 244)

Coverage File chr2 (181 of 244)

Coverage File chr2 (182 of 244)

Coverage File chr2 (183 of 244)

Coverage File chr2 (184 of 244)

Coverage File chr2 (185 of 244)

Coverage File chr2 (186 of 244)

Coverage File chr2 (187 of 244)

Coverage File chr2 (188 of 244)

Coverage File chr2 (189 of 244)

Coverage File chr2 (190 of 244)

Coverage File chr2 (191 of 244)

Coverage File chr2 (192 of 244)

Coverage File chr2 (193 of 244)

Coverage File chr2 (194 of 244)

Coverage File chr2 (195 of 244)

Coverage File chr2 (196 of 244)

Coverage File chr2 (197 of 244)

Coverage File chr2 (198 of 244)

Coverage File chr2 (199 of 244)

Coverage File chr2 (200 of 244)

Coverage File chr2 (201 of 244)

Coverage File chr2 (202 of 244)

Coverage File chr2 (203 of 244)

Coverage File chr2 (204 of 244)

Coverage File chr2 (205 of 244)

Coverage File chr2 (206 of 244)

Coverage File chr2 (207 of 244)

Coverage File chr2 (208 of 244)

Coverage File chr2 (209 of 244)

Coverage File chr2 (210 of 244)

Coverage File chr2 (211 of 244)

Coverage File chr2 (212 of 244)

Coverage File chr2 (213 of 244)

Coverage File chr2 (214 of 244)

Coverage File chr2 (215 of 244)

Coverage File chr2 (216 of 244)

Coverage File chr2 (217 of 244)

Coverage File chr2 (218 of 244)

Coverage File chr2 (219 of 244)

Coverage File chr2 (220 of 244)

Coverage File chr2 (221 of 244)

Coverage File chr2 (222 of 244)

Coverage File chr2 (223 of 244)

Coverage File chr2 (224 of 244)

Coverage File chr2 (225 of 244)

Coverage File chr2 (226 of 244)

Coverage File chr2 (227 of 244)

Coverage File chr2 (228 of 244)

Coverage File chr2 (229 of 244)

Coverage File chr2 (230 of 244)

Coverage File chr2 (231 of 244)

Coverage File chr2 (232 of 244)

Coverage File chr2 (233 of 244)

Coverage File chr2 (234 of 244)

Coverage File chr2 (235 of 244)

Coverage File chr2 (236 of 244)

Coverage File chr2 (237 of 244)

Coverage File chr2 (238 of 244)

Coverage File chr2 (239 of 244)

Coverage File chr2 (240 of 244)

Coverage File chr2 (241 of 244)

Coverage File chr2 (242 of 244)

Coverage File chr2 (243 of 244)

Coverage File chr2 (244 of 244)

Kmer Bias chr3 (13 of 21)

chr3 
Coverage File chr3 (1 of 244)

Coverage File chr3 (2 of 244)

Coverage File chr3 (3 of 244)

Coverage File chr3 (4 of 244)

Coverage File chr3 (5 of 244)

Coverage File chr3 (6 of 244)

Coverage File chr3 (7 of 244)

Coverage File chr3 (8 of 244)

Coverage File chr3 (9 of 244)

Coverage File chr3 (10 of 244)

Coverage File chr3 (11 of 244)

Coverage File chr3 (12 of 244)

Coverage File chr3 (13 of 244)

Coverage File chr3 (14 of 244)

Coverage File chr3 (15 of 244)

Coverage File chr3 (16 of 244)

Coverage File chr3 (17 of 244)

Coverage File chr3 (18 of 244)

Coverage File chr3 (19 of 244)

Coverage File chr3 (20 of 244)

Coverage File chr3 (21 of 244)

Coverage File chr3 (22 of 244)

Coverage File chr3 (23 of 244)

Coverage File chr3 (24 of 244)

Coverage File chr3 (25 of 244)

Coverage File chr3 (26 of 244)

Coverage File chr3 (27 of 244)

Coverage File chr3 (28 of 244)

Coverage File chr3 (29 of 244)

Coverage File chr3 (30 of 244)

Coverage File chr3 (31 of 244)

Coverage File chr3 (32 of 244)

Coverage File chr3 (33 of 244)

Coverage File chr3 (34 of 244)

Coverage File chr3 (35 of 244)

Coverage File chr3 (36 of 244)

Coverage File chr3 (37 of 244)

Coverage File chr3 (38 of 244)

Coverage File chr3 (39 of 244)

Coverage File chr3 (40 of 244)

Coverage File chr3 (41 of 244)

Coverage File chr3 (42 of 244)

Coverage File chr3 (43 of 244)

Coverage File chr3 (44 of 244)

Coverage File chr3 (45 of 244)

Coverage File chr3 (46 of 244)

Coverage File chr3 (47 of 244)

Coverage File chr3 (48 of 244)

Coverage File chr3 (49 of 244)

Coverage File chr3 (50 of 244)

Coverage File chr3 (51 of 244)

Coverage File chr3 (52 of 244)

Coverage File chr3 (53 of 244)

Coverage File chr3 (54 of 244)

Coverage File chr3 (55 of 244)

Coverage File chr3 (56 of 244)

Coverage File chr3 (57 of 244)

Coverage File chr3 (58 of 244)

Coverage File chr3 (59 of 244)

Coverage File chr3 (60 of 244)

Coverage File chr3 (61 of 244)

Coverage File chr3 (62 of 244)

Coverage File chr3 (63 of 244)

Coverage File chr3 (64 of 244)

Coverage File chr3 (65 of 244)

Coverage File chr3 (66 of 244)

Coverage File chr3 (67 of 244)

Coverage File chr3 (68 of 244)

Coverage File chr3 (69 of 244)

Coverage File chr3 (70 of 244)

Coverage File chr3 (71 of 244)

Coverage File chr3 (72 of 244)

Coverage File chr3 (73 of 244)

Coverage File chr3 (74 of 244)

Coverage File chr3 (75 of 244)

Coverage File chr3 (76 of 244)

Coverage File chr3 (77 of 244)

Coverage File chr3 (78 of 244)

Coverage File chr3 (79 of 244)

Coverage File chr3 (80 of 244)

Coverage File chr3 (81 of 244)

Coverage File chr3 (82 of 244)

Coverage File chr3 (83 of 244)

Coverage File chr3 (84 of 244)

Coverage File chr3 (85 of 244)

Coverage File chr3 (86 of 244)

Coverage File chr3 (87 of 244)

Coverage File chr3 (88 of 244)

Coverage File chr3 (89 of 244)

Coverage File chr3 (90 of 244)

Coverage File chr3 (91 of 244)

Coverage File chr3 (92 of 244)

Coverage File chr3 (93 of 244)

Coverage File chr3 (94 of 244)

Coverage File chr3 (95 of 244)

Coverage File chr3 (96 of 244)

Coverage File chr3 (97 of 244)

Coverage File chr3 (98 of 244)

Coverage File chr3 (99 of 244)

Coverage File chr3 (100 of 244)

Coverage File chr3 (101 of 244)

Coverage File chr3 (102 of 244)

Coverage File chr3 (103 of 244)

Coverage File chr3 (104 of 244)

Coverage File chr3 (105 of 244)

Coverage File chr3 (106 of 244)

Coverage File chr3 (107 of 244)

Coverage File chr3 (108 of 244)

Coverage File chr3 (109 of 244)

Coverage File chr3 (110 of 244)

Coverage File chr3 (111 of 244)

Coverage File chr3 (112 of 244)

Coverage File chr3 (113 of 244)

Coverage File chr3 (114 of 244)

Coverage File chr3 (115 of 244)

Coverage File chr3 (116 of 244)

Coverage File chr3 (117 of 244)

Coverage File chr3 (118 of 244)

Coverage File chr3 (119 of 244)

Coverage File chr3 (120 of 244)

Coverage File chr3 (121 of 244)

Coverage File chr3 (122 of 244)

Coverage File chr3 (123 of 244)

Coverage File chr3 (124 of 244)

Coverage File chr3 (125 of 244)

Coverage File chr3 (126 of 244)

Coverage File chr3 (127 of 244)

Coverage File chr3 (128 of 244)

Coverage File chr3 (129 of 244)

Coverage File chr3 (130 of 244)

Coverage File chr3 (131 of 244)

Coverage File chr3 (132 of 244)

Coverage File chr3 (133 of 244)

Coverage File chr3 (134 of 244)

Coverage File chr3 (135 of 244)

Coverage File chr3 (136 of 244)

Coverage File chr3 (137 of 244)

Coverage File chr3 (138 of 244)

Coverage File chr3 (139 of 244)

Coverage File chr3 (140 of 244)

Coverage File chr3 (141 of 244)

Coverage File chr3 (142 of 244)

Coverage File chr3 (143 of 244)

Coverage File chr3 (144 of 244)

Coverage File chr3 (145 of 244)

Coverage File chr3 (146 of 244)

Coverage File chr3 (147 of 244)

Coverage File chr3 (148 of 244)

Coverage File chr3 (149 of 244)

Coverage File chr3 (150 of 244)

Coverage File chr3 (151 of 244)

Coverage File chr3 (152 of 244)

Coverage File chr3 (153 of 244)

Coverage File chr3 (154 of 244)

Coverage File chr3 (155 of 244)

Coverage File chr3 (156 of 244)

Coverage File chr3 (157 of 244)

Coverage File chr3 (158 of 244)

Coverage File chr3 (159 of 244)

Coverage File chr3 (160 of 244)

Coverage File chr3 (161 of 244)

Coverage File chr3 (162 of 244)

Coverage File chr3 (163 of 244)

Coverage File chr3 (164 of 244)

Coverage File chr3 (165 of 244)

Coverage File chr3 (166 of 244)

Coverage File chr3 (167 of 244)

Coverage File chr3 (168 of 244)

Coverage File chr3 (169 of 244)

Coverage File chr3 (170 of 244)

Coverage File chr3 (171 of 244)

Coverage File chr3 (172 of 244)

Coverage File chr3 (173 of 244)

Coverage File chr3 (174 of 244)

Coverage File chr3 (175 of 244)

Coverage File chr3 (176 of 244)

Coverage File chr3 (177 of 244)

Coverage File chr3 (178 of 244)

Coverage File chr3 (179 of 244)

Coverage File chr3 (180 of 244)

Coverage File chr3 (181 of 244)

Coverage File chr3 (182 of 244)

Coverage File chr3 (183 of 244)

Coverage File chr3 (184 of 244)

Coverage File chr3 (185 of 244)

Coverage File chr3 (186 of 244)

Coverage File chr3 (187 of 244)

Coverage File chr3 (188 of 244)

Coverage File chr3 (189 of 244)

Coverage File chr3 (190 of 244)

Coverage File chr3 (191 of 244)

Coverage File chr3 (192 of 244)

Coverage File chr3 (193 of 244)

Coverage File chr3 (194 of 244)

Coverage File chr3 (195 of 244)

Coverage File chr3 (196 of 244)

Coverage File chr3 (197 of 244)

Coverage File chr3 (198 of 244)

Coverage File chr3 (199 of 244)

Coverage File chr3 (200 of 244)

Coverage File chr3 (201 of 244)

Coverage File chr3 (202 of 244)

Coverage File chr3 (203 of 244)

Coverage File chr3 (204 of 244)

Coverage File chr3 (205 of 244)

Coverage File chr3 (206 of 244)

Coverage File chr3 (207 of 244)

Coverage File chr3 (208 of 244)

Coverage File chr3 (209 of 244)

Coverage File chr3 (210 of 244)

Coverage File chr3 (211 of 244)

Coverage File chr3 (212 of 244)

Coverage File chr3 (213 of 244)

Coverage File chr3 (214 of 244)

Coverage File chr3 (215 of 244)

Coverage File chr3 (216 of 244)

Coverage File chr3 (217 of 244)

Coverage File chr3 (218 of 244)

Coverage File chr3 (219 of 244)

Coverage File chr3 (220 of 244)

Coverage File chr3 (221 of 244)

Coverage File chr3 (222 of 244)

Coverage File chr3 (223 of 244)

Coverage File chr3 (224 of 244)

Coverage File chr3 (225 of 244)

Coverage File chr3 (226 of 244)

Coverage File chr3 (227 of 244)

Coverage File chr3 (228 of 244)

Coverage File chr3 (229 of 244)

Coverage File chr3 (230 of 244)

Coverage File chr3 (231 of 244)

Coverage File chr3 (232 of 244)

Coverage File chr3 (233 of 244)

Coverage File chr3 (234 of 244)

Coverage File chr3 (235 of 244)

Coverage File chr3 (236 of 244)

Coverage File chr3 (237 of 244)

Coverage File chr3 (238 of 244)

Coverage File chr3 (239 of 244)

Coverage File chr3 (240 of 244)

Coverage File chr3 (241 of 244)

Coverage File chr3 (242 of 244)

Coverage File chr3 (243 of 244)

Coverage File chr3 (244 of 244)

Kmer Bias chr4 (14 of 21)

chr4 
Coverage File chr4 (1 of 244)

Coverage File chr4 (2 of 244)

Coverage File chr4 (3 of 244)

Coverage File chr4 (4 of 244)

Coverage File chr4 (5 of 244)

Coverage File chr4 (6 of 244)

Coverage File chr4 (7 of 244)

Coverage File chr4 (8 of 244)

Coverage File chr4 (9 of 244)

Coverage File chr4 (10 of 244)

Coverage File chr4 (11 of 244)

Coverage File chr4 (12 of 244)

Coverage File chr4 (13 of 244)

Coverage File chr4 (14 of 244)

Coverage File chr4 (15 of 244)

Coverage File chr4 (16 of 244)

Coverage File chr4 (17 of 244)

Coverage File chr4 (18 of 244)

Coverage File chr4 (19 of 244)

Coverage File chr4 (20 of 244)

Coverage File chr4 (21 of 244)

Coverage File chr4 (22 of 244)

Coverage File chr4 (23 of 244)

Coverage File chr4 (24 of 244)

Coverage File chr4 (25 of 244)

Coverage File chr4 (26 of 244)

Coverage File chr4 (27 of 244)

Coverage File chr4 (28 of 244)

Coverage File chr4 (29 of 244)

Coverage File chr4 (30 of 244)

Coverage File chr4 (31 of 244)

Coverage File chr4 (32 of 244)

Coverage File chr4 (33 of 244)

Coverage File chr4 (34 of 244)

Coverage File chr4 (35 of 244)

Coverage File chr4 (36 of 244)

Coverage File chr4 (37 of 244)

Coverage File chr4 (38 of 244)

Coverage File chr4 (39 of 244)

Coverage File chr4 (40 of 244)

Coverage File chr4 (41 of 244)

Coverage File chr4 (42 of 244)

Coverage File chr4 (43 of 244)

Coverage File chr4 (44 of 244)

Coverage File chr4 (45 of 244)

Coverage File chr4 (46 of 244)

Coverage File chr4 (47 of 244)

Coverage File chr4 (48 of 244)

Coverage File chr4 (49 of 244)

Coverage File chr4 (50 of 244)

Coverage File chr4 (51 of 244)

Coverage File chr4 (52 of 244)

Coverage File chr4 (53 of 244)

Coverage File chr4 (54 of 244)

Coverage File chr4 (55 of 244)

Coverage File chr4 (56 of 244)

Coverage File chr4 (57 of 244)

Coverage File chr4 (58 of 244)

Coverage File chr4 (59 of 244)

Coverage File chr4 (60 of 244)

Coverage File chr4 (61 of 244)

Coverage File chr4 (62 of 244)

Coverage File chr4 (63 of 244)

Coverage File chr4 (64 of 244)

Coverage File chr4 (65 of 244)

Coverage File chr4 (66 of 244)

Coverage File chr4 (67 of 244)

Coverage File chr4 (68 of 244)

Coverage File chr4 (69 of 244)

Coverage File chr4 (70 of 244)

Coverage File chr4 (71 of 244)

Coverage File chr4 (72 of 244)

Coverage File chr4 (73 of 244)

Coverage File chr4 (74 of 244)

Coverage File chr4 (75 of 244)

Coverage File chr4 (76 of 244)

Coverage File chr4 (77 of 244)

Coverage File chr4 (78 of 244)

Coverage File chr4 (79 of 244)

Coverage File chr4 (80 of 244)

Coverage File chr4 (81 of 244)

Coverage File chr4 (82 of 244)

Coverage File chr4 (83 of 244)

Coverage File chr4 (84 of 244)

Coverage File chr4 (85 of 244)

Coverage File chr4 (86 of 244)

Coverage File chr4 (87 of 244)

Coverage File chr4 (88 of 244)

Coverage File chr4 (89 of 244)

Coverage File chr4 (90 of 244)

Coverage File chr4 (91 of 244)

Coverage File chr4 (92 of 244)

Coverage File chr4 (93 of 244)

Coverage File chr4 (94 of 244)

Coverage File chr4 (95 of 244)

Coverage File chr4 (96 of 244)

Coverage File chr4 (97 of 244)

Coverage File chr4 (98 of 244)

Coverage File chr4 (99 of 244)

Coverage File chr4 (100 of 244)

Coverage File chr4 (101 of 244)

Coverage File chr4 (102 of 244)

Coverage File chr4 (103 of 244)

Coverage File chr4 (104 of 244)

Coverage File chr4 (105 of 244)

Coverage File chr4 (106 of 244)

Coverage File chr4 (107 of 244)

Coverage File chr4 (108 of 244)

Coverage File chr4 (109 of 244)

Coverage File chr4 (110 of 244)

Coverage File chr4 (111 of 244)

Coverage File chr4 (112 of 244)

Coverage File chr4 (113 of 244)

Coverage File chr4 (114 of 244)

Coverage File chr4 (115 of 244)

Coverage File chr4 (116 of 244)

Coverage File chr4 (117 of 244)

Coverage File chr4 (118 of 244)

Coverage File chr4 (119 of 244)

Coverage File chr4 (120 of 244)

Coverage File chr4 (121 of 244)

Coverage File chr4 (122 of 244)

Coverage File chr4 (123 of 244)

Coverage File chr4 (124 of 244)

Coverage File chr4 (125 of 244)

Coverage File chr4 (126 of 244)

Coverage File chr4 (127 of 244)

Coverage File chr4 (128 of 244)

Coverage File chr4 (129 of 244)

Coverage File chr4 (130 of 244)

Coverage File chr4 (131 of 244)

Coverage File chr4 (132 of 244)

Coverage File chr4 (133 of 244)

Coverage File chr4 (134 of 244)

Coverage File chr4 (135 of 244)

Coverage File chr4 (136 of 244)

Coverage File chr4 (137 of 244)

Coverage File chr4 (138 of 244)

Coverage File chr4 (139 of 244)

Coverage File chr4 (140 of 244)

Coverage File chr4 (141 of 244)

Coverage File chr4 (142 of 244)

Coverage File chr4 (143 of 244)

Coverage File chr4 (144 of 244)

Coverage File chr4 (145 of 244)

Coverage File chr4 (146 of 244)

Coverage File chr4 (147 of 244)

Coverage File chr4 (148 of 244)

Coverage File chr4 (149 of 244)

Coverage File chr4 (150 of 244)

Coverage File chr4 (151 of 244)

Coverage File chr4 (152 of 244)

Coverage File chr4 (153 of 244)

Coverage File chr4 (154 of 244)

Coverage File chr4 (155 of 244)

Coverage File chr4 (156 of 244)

Coverage File chr4 (157 of 244)

Coverage File chr4 (158 of 244)

Coverage File chr4 (159 of 244)

Coverage File chr4 (160 of 244)

Coverage File chr4 (161 of 244)

Coverage File chr4 (162 of 244)

Coverage File chr4 (163 of 244)

Coverage File chr4 (164 of 244)

Coverage File chr4 (165 of 244)

Coverage File chr4 (166 of 244)

Coverage File chr4 (167 of 244)

Coverage File chr4 (168 of 244)

Coverage File chr4 (169 of 244)

Coverage File chr4 (170 of 244)

Coverage File chr4 (171 of 244)

Coverage File chr4 (172 of 244)

Coverage File chr4 (173 of 244)

Coverage File chr4 (174 of 244)

Coverage File chr4 (175 of 244)

Coverage File chr4 (176 of 244)

Coverage File chr4 (177 of 244)

Coverage File chr4 (178 of 244)

Coverage File chr4 (179 of 244)

Coverage File chr4 (180 of 244)

Coverage File chr4 (181 of 244)

Coverage File chr4 (182 of 244)

Coverage File chr4 (183 of 244)

Coverage File chr4 (184 of 244)

Coverage File chr4 (185 of 244)

Coverage File chr4 (186 of 244)

Coverage File chr4 (187 of 244)

Coverage File chr4 (188 of 244)

Coverage File chr4 (189 of 244)

Coverage File chr4 (190 of 244)

Coverage File chr4 (191 of 244)

Coverage File chr4 (192 of 244)

Coverage File chr4 (193 of 244)

Coverage File chr4 (194 of 244)

Coverage File chr4 (195 of 244)

Coverage File chr4 (196 of 244)

Coverage File chr4 (197 of 244)

Coverage File chr4 (198 of 244)

Coverage File chr4 (199 of 244)

Coverage File chr4 (200 of 244)

Coverage File chr4 (201 of 244)

Coverage File chr4 (202 of 244)

Coverage File chr4 (203 of 244)

Coverage File chr4 (204 of 244)

Coverage File chr4 (205 of 244)

Coverage File chr4 (206 of 244)

Coverage File chr4 (207 of 244)

Coverage File chr4 (208 of 244)

Coverage File chr4 (209 of 244)

Coverage File chr4 (210 of 244)

Coverage File chr4 (211 of 244)

Coverage File chr4 (212 of 244)

Coverage File chr4 (213 of 244)

Coverage File chr4 (214 of 244)

Coverage File chr4 (215 of 244)

Coverage File chr4 (216 of 244)

Coverage File chr4 (217 of 244)

Coverage File chr4 (218 of 244)

Coverage File chr4 (219 of 244)

Coverage File chr4 (220 of 244)

Coverage File chr4 (221 of 244)

Coverage File chr4 (222 of 244)

Coverage File chr4 (223 of 244)

Coverage File chr4 (224 of 244)

Coverage File chr4 (225 of 244)

Coverage File chr4 (226 of 244)

Coverage File chr4 (227 of 244)

Coverage File chr4 (228 of 244)

Coverage File chr4 (229 of 244)

Coverage File chr4 (230 of 244)

Coverage File chr4 (231 of 244)

Coverage File chr4 (232 of 244)

Coverage File chr4 (233 of 244)

Coverage File chr4 (234 of 244)

Coverage File chr4 (235 of 244)

Coverage File chr4 (236 of 244)

Coverage File chr4 (237 of 244)

Coverage File chr4 (238 of 244)

Coverage File chr4 (239 of 244)

Coverage File chr4 (240 of 244)

Coverage File chr4 (241 of 244)

Coverage File chr4 (242 of 244)

Coverage File chr4 (243 of 244)

Coverage File chr4 (244 of 244)

Kmer Bias chr5 (15 of 21)

chr5 
Coverage File chr5 (1 of 244)

Coverage File chr5 (2 of 244)

Coverage File chr5 (3 of 244)

Coverage File chr5 (4 of 244)

Coverage File chr5 (5 of 244)

Coverage File chr5 (6 of 244)

Coverage File chr5 (7 of 244)

Coverage File chr5 (8 of 244)

Coverage File chr5 (9 of 244)

Coverage File chr5 (10 of 244)

Coverage File chr5 (11 of 244)

Coverage File chr5 (12 of 244)

Coverage File chr5 (13 of 244)

Coverage File chr5 (14 of 244)

Coverage File chr5 (15 of 244)

Coverage File chr5 (16 of 244)

Coverage File chr5 (17 of 244)

Coverage File chr5 (18 of 244)

Coverage File chr5 (19 of 244)

Coverage File chr5 (20 of 244)

Coverage File chr5 (21 of 244)

Coverage File chr5 (22 of 244)

Coverage File chr5 (23 of 244)

Coverage File chr5 (24 of 244)

Coverage File chr5 (25 of 244)

Coverage File chr5 (26 of 244)

Coverage File chr5 (27 of 244)

Coverage File chr5 (28 of 244)

Coverage File chr5 (29 of 244)

Coverage File chr5 (30 of 244)

Coverage File chr5 (31 of 244)

Coverage File chr5 (32 of 244)

Coverage File chr5 (33 of 244)

Coverage File chr5 (34 of 244)

Coverage File chr5 (35 of 244)

Coverage File chr5 (36 of 244)

Coverage File chr5 (37 of 244)

Coverage File chr5 (38 of 244)

Coverage File chr5 (39 of 244)

Coverage File chr5 (40 of 244)

Coverage File chr5 (41 of 244)

Coverage File chr5 (42 of 244)

Coverage File chr5 (43 of 244)

Coverage File chr5 (44 of 244)

Coverage File chr5 (45 of 244)

Coverage File chr5 (46 of 244)

Coverage File chr5 (47 of 244)

Coverage File chr5 (48 of 244)

Coverage File chr5 (49 of 244)

Coverage File chr5 (50 of 244)

Coverage File chr5 (51 of 244)

Coverage File chr5 (52 of 244)

Coverage File chr5 (53 of 244)

Coverage File chr5 (54 of 244)

Coverage File chr5 (55 of 244)

Coverage File chr5 (56 of 244)

Coverage File chr5 (57 of 244)

Coverage File chr5 (58 of 244)

Coverage File chr5 (59 of 244)

Coverage File chr5 (60 of 244)

Coverage File chr5 (61 of 244)

Coverage File chr5 (62 of 244)

Coverage File chr5 (63 of 244)

Coverage File chr5 (64 of 244)

Coverage File chr5 (65 of 244)

Coverage File chr5 (66 of 244)

Coverage File chr5 (67 of 244)

Coverage File chr5 (68 of 244)

Coverage File chr5 (69 of 244)

Coverage File chr5 (70 of 244)

Coverage File chr5 (71 of 244)

Coverage File chr5 (72 of 244)

Coverage File chr5 (73 of 244)

Coverage File chr5 (74 of 244)

Coverage File chr5 (75 of 244)

Coverage File chr5 (76 of 244)

Coverage File chr5 (77 of 244)

Coverage File chr5 (78 of 244)

Coverage File chr5 (79 of 244)

Coverage File chr5 (80 of 244)

Coverage File chr5 (81 of 244)

Coverage File chr5 (82 of 244)

Coverage File chr5 (83 of 244)

Coverage File chr5 (84 of 244)

Coverage File chr5 (85 of 244)

Coverage File chr5 (86 of 244)

Coverage File chr5 (87 of 244)

Coverage File chr5 (88 of 244)

Coverage File chr5 (89 of 244)

Coverage File chr5 (90 of 244)

Coverage File chr5 (91 of 244)

Coverage File chr5 (92 of 244)

Coverage File chr5 (93 of 244)

Coverage File chr5 (94 of 244)

Coverage File chr5 (95 of 244)

Coverage File chr5 (96 of 244)

Coverage File chr5 (97 of 244)

Coverage File chr5 (98 of 244)

Coverage File chr5 (99 of 244)

Coverage File chr5 (100 of 244)

Coverage File chr5 (101 of 244)

Coverage File chr5 (102 of 244)

Coverage File chr5 (103 of 244)

Coverage File chr5 (104 of 244)

Coverage File chr5 (105 of 244)

Coverage File chr5 (106 of 244)

Coverage File chr5 (107 of 244)

Coverage File chr5 (108 of 244)

Coverage File chr5 (109 of 244)

Coverage File chr5 (110 of 244)

Coverage File chr5 (111 of 244)

Coverage File chr5 (112 of 244)

Coverage File chr5 (113 of 244)

Coverage File chr5 (114 of 244)

Coverage File chr5 (115 of 244)

Coverage File chr5 (116 of 244)

Coverage File chr5 (117 of 244)

Coverage File chr5 (118 of 244)

Coverage File chr5 (119 of 244)

Coverage File chr5 (120 of 244)

Coverage File chr5 (121 of 244)

Coverage File chr5 (122 of 244)

Coverage File chr5 (123 of 244)

Coverage File chr5 (124 of 244)

Coverage File chr5 (125 of 244)

Coverage File chr5 (126 of 244)

Coverage File chr5 (127 of 244)

Coverage File chr5 (128 of 244)

Coverage File chr5 (129 of 244)

Coverage File chr5 (130 of 244)

Coverage File chr5 (131 of 244)

Coverage File chr5 (132 of 244)

Coverage File chr5 (133 of 244)

Coverage File chr5 (134 of 244)

Coverage File chr5 (135 of 244)

Coverage File chr5 (136 of 244)

Coverage File chr5 (137 of 244)

Coverage File chr5 (138 of 244)

Coverage File chr5 (139 of 244)

Coverage File chr5 (140 of 244)

Coverage File chr5 (141 of 244)

Coverage File chr5 (142 of 244)

Coverage File chr5 (143 of 244)

Coverage File chr5 (144 of 244)

Coverage File chr5 (145 of 244)

Coverage File chr5 (146 of 244)

Coverage File chr5 (147 of 244)

Coverage File chr5 (148 of 244)

Coverage File chr5 (149 of 244)

Coverage File chr5 (150 of 244)

Coverage File chr5 (151 of 244)

Coverage File chr5 (152 of 244)

Coverage File chr5 (153 of 244)

Coverage File chr5 (154 of 244)

Coverage File chr5 (155 of 244)

Coverage File chr5 (156 of 244)

Coverage File chr5 (157 of 244)

Coverage File chr5 (158 of 244)

Coverage File chr5 (159 of 244)

Coverage File chr5 (160 of 244)

Coverage File chr5 (161 of 244)

Coverage File chr5 (162 of 244)

Coverage File chr5 (163 of 244)

Coverage File chr5 (164 of 244)

Coverage File chr5 (165 of 244)

Coverage File chr5 (166 of 244)

Coverage File chr5 (167 of 244)

Coverage File chr5 (168 of 244)

Coverage File chr5 (169 of 244)

Coverage File chr5 (170 of 244)

Coverage File chr5 (171 of 244)

Coverage File chr5 (172 of 244)

Coverage File chr5 (173 of 244)

Coverage File chr5 (174 of 244)

Coverage File chr5 (175 of 244)

Coverage File chr5 (176 of 244)

Coverage File chr5 (177 of 244)

Coverage File chr5 (178 of 244)

Coverage File chr5 (179 of 244)

Coverage File chr5 (180 of 244)

Coverage File chr5 (181 of 244)

Coverage File chr5 (182 of 244)

Coverage File chr5 (183 of 244)

Coverage File chr5 (184 of 244)

Coverage File chr5 (185 of 244)

Coverage File chr5 (186 of 244)

Coverage File chr5 (187 of 244)

Coverage File chr5 (188 of 244)

Coverage File chr5 (189 of 244)

Coverage File chr5 (190 of 244)

Coverage File chr5 (191 of 244)

Coverage File chr5 (192 of 244)

Coverage File chr5 (193 of 244)

Coverage File chr5 (194 of 244)

Coverage File chr5 (195 of 244)

Coverage File chr5 (196 of 244)

Coverage File chr5 (197 of 244)

Coverage File chr5 (198 of 244)

Coverage File chr5 (199 of 244)

Coverage File chr5 (200 of 244)

Coverage File chr5 (201 of 244)

Coverage File chr5 (202 of 244)

Coverage File chr5 (203 of 244)

Coverage File chr5 (204 of 244)

Coverage File chr5 (205 of 244)

Coverage File chr5 (206 of 244)

Coverage File chr5 (207 of 244)

Coverage File chr5 (208 of 244)

Coverage File chr5 (209 of 244)

Coverage File chr5 (210 of 244)

Coverage File chr5 (211 of 244)

Coverage File chr5 (212 of 244)

Coverage File chr5 (213 of 244)

Coverage File chr5 (214 of 244)

Coverage File chr5 (215 of 244)

Coverage File chr5 (216 of 244)

Coverage File chr5 (217 of 244)

Coverage File chr5 (218 of 244)

Coverage File chr5 (219 of 244)

Coverage File chr5 (220 of 244)

Coverage File chr5 (221 of 244)

Coverage File chr5 (222 of 244)

Coverage File chr5 (223 of 244)

Coverage File chr5 (224 of 244)

Coverage File chr5 (225 of 244)

Coverage File chr5 (226 of 244)

Coverage File chr5 (227 of 244)

Coverage File chr5 (228 of 244)

Coverage File chr5 (229 of 244)

Coverage File chr5 (230 of 244)

Coverage File chr5 (231 of 244)

Coverage File chr5 (232 of 244)

Coverage File chr5 (233 of 244)

Coverage File chr5 (234 of 244)

Coverage File chr5 (235 of 244)

Coverage File chr5 (236 of 244)

Coverage File chr5 (237 of 244)

Coverage File chr5 (238 of 244)

Coverage File chr5 (239 of 244)

Coverage File chr5 (240 of 244)

Coverage File chr5 (241 of 244)

Coverage File chr5 (242 of 244)

Coverage File chr5 (243 of 244)

Coverage File chr5 (244 of 244)

Kmer Bias chr6 (16 of 21)

chr6 
Coverage File chr6 (1 of 244)

Coverage File chr6 (2 of 244)

Coverage File chr6 (3 of 244)

Coverage File chr6 (4 of 244)

Coverage File chr6 (5 of 244)

Coverage File chr6 (6 of 244)

Coverage File chr6 (7 of 244)

Coverage File chr6 (8 of 244)

Coverage File chr6 (9 of 244)

Coverage File chr6 (10 of 244)

Coverage File chr6 (11 of 244)

Coverage File chr6 (12 of 244)

Coverage File chr6 (13 of 244)

Coverage File chr6 (14 of 244)

Coverage File chr6 (15 of 244)

Coverage File chr6 (16 of 244)

Coverage File chr6 (17 of 244)

Coverage File chr6 (18 of 244)

Coverage File chr6 (19 of 244)

Coverage File chr6 (20 of 244)

Coverage File chr6 (21 of 244)

Coverage File chr6 (22 of 244)

Coverage File chr6 (23 of 244)

Coverage File chr6 (24 of 244)

Coverage File chr6 (25 of 244)

Coverage File chr6 (26 of 244)

Coverage File chr6 (27 of 244)

Coverage File chr6 (28 of 244)

Coverage File chr6 (29 of 244)

Coverage File chr6 (30 of 244)

Coverage File chr6 (31 of 244)

Coverage File chr6 (32 of 244)

Coverage File chr6 (33 of 244)

Coverage File chr6 (34 of 244)

Coverage File chr6 (35 of 244)

Coverage File chr6 (36 of 244)

Coverage File chr6 (37 of 244)

Coverage File chr6 (38 of 244)

Coverage File chr6 (39 of 244)

Coverage File chr6 (40 of 244)

Coverage File chr6 (41 of 244)

Coverage File chr6 (42 of 244)

Coverage File chr6 (43 of 244)

Coverage File chr6 (44 of 244)

Coverage File chr6 (45 of 244)

Coverage File chr6 (46 of 244)

Coverage File chr6 (47 of 244)

Coverage File chr6 (48 of 244)

Coverage File chr6 (49 of 244)

Coverage File chr6 (50 of 244)

Coverage File chr6 (51 of 244)

Coverage File chr6 (52 of 244)

Coverage File chr6 (53 of 244)

Coverage File chr6 (54 of 244)

Coverage File chr6 (55 of 244)

Coverage File chr6 (56 of 244)

Coverage File chr6 (57 of 244)

Coverage File chr6 (58 of 244)

Coverage File chr6 (59 of 244)

Coverage File chr6 (60 of 244)

Coverage File chr6 (61 of 244)

Coverage File chr6 (62 of 244)

Coverage File chr6 (63 of 244)

Coverage File chr6 (64 of 244)

Coverage File chr6 (65 of 244)

Coverage File chr6 (66 of 244)

Coverage File chr6 (67 of 244)

Coverage File chr6 (68 of 244)

Coverage File chr6 (69 of 244)

Coverage File chr6 (70 of 244)

Coverage File chr6 (71 of 244)

Coverage File chr6 (72 of 244)

Coverage File chr6 (73 of 244)

Coverage File chr6 (74 of 244)

Coverage File chr6 (75 of 244)

Coverage File chr6 (76 of 244)

Coverage File chr6 (77 of 244)

Coverage File chr6 (78 of 244)

Coverage File chr6 (79 of 244)

Coverage File chr6 (80 of 244)

Coverage File chr6 (81 of 244)

Coverage File chr6 (82 of 244)

Coverage File chr6 (83 of 244)

Coverage File chr6 (84 of 244)

Coverage File chr6 (85 of 244)

Coverage File chr6 (86 of 244)

Coverage File chr6 (87 of 244)

Coverage File chr6 (88 of 244)

Coverage File chr6 (89 of 244)

Coverage File chr6 (90 of 244)

Coverage File chr6 (91 of 244)

Coverage File chr6 (92 of 244)

Coverage File chr6 (93 of 244)

Coverage File chr6 (94 of 244)

Coverage File chr6 (95 of 244)

Coverage File chr6 (96 of 244)

Coverage File chr6 (97 of 244)

Coverage File chr6 (98 of 244)

Coverage File chr6 (99 of 244)

Coverage File chr6 (100 of 244)

Coverage File chr6 (101 of 244)

Coverage File chr6 (102 of 244)

Coverage File chr6 (103 of 244)

Coverage File chr6 (104 of 244)

Coverage File chr6 (105 of 244)

Coverage File chr6 (106 of 244)

Coverage File chr6 (107 of 244)

Coverage File chr6 (108 of 244)

Coverage File chr6 (109 of 244)

Coverage File chr6 (110 of 244)

Coverage File chr6 (111 of 244)

Coverage File chr6 (112 of 244)

Coverage File chr6 (113 of 244)

Coverage File chr6 (114 of 244)

Coverage File chr6 (115 of 244)

Coverage File chr6 (116 of 244)

Coverage File chr6 (117 of 244)

Coverage File chr6 (118 of 244)

Coverage File chr6 (119 of 244)

Coverage File chr6 (120 of 244)

Coverage File chr6 (121 of 244)

Coverage File chr6 (122 of 244)

Coverage File chr6 (123 of 244)

Coverage File chr6 (124 of 244)

Coverage File chr6 (125 of 244)

Coverage File chr6 (126 of 244)

Coverage File chr6 (127 of 244)

Coverage File chr6 (128 of 244)

Coverage File chr6 (129 of 244)

Coverage File chr6 (130 of 244)

Coverage File chr6 (131 of 244)

Coverage File chr6 (132 of 244)

Coverage File chr6 (133 of 244)

Coverage File chr6 (134 of 244)

Coverage File chr6 (135 of 244)

Coverage File chr6 (136 of 244)

Coverage File chr6 (137 of 244)

Coverage File chr6 (138 of 244)

Coverage File chr6 (139 of 244)

Coverage File chr6 (140 of 244)

Coverage File chr6 (141 of 244)

Coverage File chr6 (142 of 244)

Coverage File chr6 (143 of 244)

Coverage File chr6 (144 of 244)

Coverage File chr6 (145 of 244)

Coverage File chr6 (146 of 244)

Coverage File chr6 (147 of 244)

Coverage File chr6 (148 of 244)

Coverage File chr6 (149 of 244)

Coverage File chr6 (150 of 244)

Coverage File chr6 (151 of 244)

Coverage File chr6 (152 of 244)

Coverage File chr6 (153 of 244)

Coverage File chr6 (154 of 244)

Coverage File chr6 (155 of 244)

Coverage File chr6 (156 of 244)

Coverage File chr6 (157 of 244)

Coverage File chr6 (158 of 244)

Coverage File chr6 (159 of 244)

Coverage File chr6 (160 of 244)

Coverage File chr6 (161 of 244)

Coverage File chr6 (162 of 244)

Coverage File chr6 (163 of 244)

Coverage File chr6 (164 of 244)

Coverage File chr6 (165 of 244)

Coverage File chr6 (166 of 244)

Coverage File chr6 (167 of 244)

Coverage File chr6 (168 of 244)

Coverage File chr6 (169 of 244)

Coverage File chr6 (170 of 244)

Coverage File chr6 (171 of 244)

Coverage File chr6 (172 of 244)

Coverage File chr6 (173 of 244)

Coverage File chr6 (174 of 244)

Coverage File chr6 (175 of 244)

Coverage File chr6 (176 of 244)

Coverage File chr6 (177 of 244)

Coverage File chr6 (178 of 244)

Coverage File chr6 (179 of 244)

Coverage File chr6 (180 of 244)

Coverage File chr6 (181 of 244)

Coverage File chr6 (182 of 244)

Coverage File chr6 (183 of 244)

Coverage File chr6 (184 of 244)

Coverage File chr6 (185 of 244)

Coverage File chr6 (186 of 244)

Coverage File chr6 (187 of 244)

Coverage File chr6 (188 of 244)

Coverage File chr6 (189 of 244)

Coverage File chr6 (190 of 244)

Coverage File chr6 (191 of 244)

Coverage File chr6 (192 of 244)

Coverage File chr6 (193 of 244)

Coverage File chr6 (194 of 244)

Coverage File chr6 (195 of 244)

Coverage File chr6 (196 of 244)

Coverage File chr6 (197 of 244)

Coverage File chr6 (198 of 244)

Coverage File chr6 (199 of 244)

Coverage File chr6 (200 of 244)

Coverage File chr6 (201 of 244)

Coverage File chr6 (202 of 244)

Coverage File chr6 (203 of 244)

Coverage File chr6 (204 of 244)

Coverage File chr6 (205 of 244)

Coverage File chr6 (206 of 244)

Coverage File chr6 (207 of 244)

Coverage File chr6 (208 of 244)

Coverage File chr6 (209 of 244)

Coverage File chr6 (210 of 244)

Coverage File chr6 (211 of 244)

Coverage File chr6 (212 of 244)

Coverage File chr6 (213 of 244)

Coverage File chr6 (214 of 244)

Coverage File chr6 (215 of 244)

Coverage File chr6 (216 of 244)

Coverage File chr6 (217 of 244)

Coverage File chr6 (218 of 244)

Coverage File chr6 (219 of 244)

Coverage File chr6 (220 of 244)

Coverage File chr6 (221 of 244)

Coverage File chr6 (222 of 244)

Coverage File chr6 (223 of 244)

Coverage File chr6 (224 of 244)

Coverage File chr6 (225 of 244)

Coverage File chr6 (226 of 244)

Coverage File chr6 (227 of 244)

Coverage File chr6 (228 of 244)

Coverage File chr6 (229 of 244)

Coverage File chr6 (230 of 244)

Coverage File chr6 (231 of 244)

Coverage File chr6 (232 of 244)

Coverage File chr6 (233 of 244)

Coverage File chr6 (234 of 244)

Coverage File chr6 (235 of 244)

Coverage File chr6 (236 of 244)

Coverage File chr6 (237 of 244)

Coverage File chr6 (238 of 244)

Coverage File chr6 (239 of 244)

Coverage File chr6 (240 of 244)

Coverage File chr6 (241 of 244)

Coverage File chr6 (242 of 244)

Coverage File chr6 (243 of 244)

Coverage File chr6 (244 of 244)

Kmer Bias chr7 (17 of 21)

chr7 
Coverage File chr7 (1 of 244)

Coverage File chr7 (2 of 244)

Coverage File chr7 (3 of 244)

Coverage File chr7 (4 of 244)

Coverage File chr7 (5 of 244)

Coverage File chr7 (6 of 244)

Coverage File chr7 (7 of 244)

Coverage File chr7 (8 of 244)

Coverage File chr7 (9 of 244)

Coverage File chr7 (10 of 244)

Coverage File chr7 (11 of 244)

Coverage File chr7 (12 of 244)

Coverage File chr7 (13 of 244)

Coverage File chr7 (14 of 244)

Coverage File chr7 (15 of 244)

Coverage File chr7 (16 of 244)

Coverage File chr7 (17 of 244)

Coverage File chr7 (18 of 244)

Coverage File chr7 (19 of 244)

Coverage File chr7 (20 of 244)

Coverage File chr7 (21 of 244)

Coverage File chr7 (22 of 244)

Coverage File chr7 (23 of 244)

Coverage File chr7 (24 of 244)

Coverage File chr7 (25 of 244)

Coverage File chr7 (26 of 244)

Coverage File chr7 (27 of 244)

Coverage File chr7 (28 of 244)

Coverage File chr7 (29 of 244)

Coverage File chr7 (30 of 244)

Coverage File chr7 (31 of 244)

Coverage File chr7 (32 of 244)

Coverage File chr7 (33 of 244)

Coverage File chr7 (34 of 244)

Coverage File chr7 (35 of 244)

Coverage File chr7 (36 of 244)

Coverage File chr7 (37 of 244)

Coverage File chr7 (38 of 244)

Coverage File chr7 (39 of 244)

Coverage File chr7 (40 of 244)

Coverage File chr7 (41 of 244)

Coverage File chr7 (42 of 244)

Coverage File chr7 (43 of 244)

Coverage File chr7 (44 of 244)

Coverage File chr7 (45 of 244)

Coverage File chr7 (46 of 244)

Coverage File chr7 (47 of 244)

Coverage File chr7 (48 of 244)

Coverage File chr7 (49 of 244)

Coverage File chr7 (50 of 244)

Coverage File chr7 (51 of 244)

Coverage File chr7 (52 of 244)

Coverage File chr7 (53 of 244)

Coverage File chr7 (54 of 244)

Coverage File chr7 (55 of 244)

Coverage File chr7 (56 of 244)

Coverage File chr7 (57 of 244)

Coverage File chr7 (58 of 244)

Coverage File chr7 (59 of 244)

Coverage File chr7 (60 of 244)

Coverage File chr7 (61 of 244)

Coverage File chr7 (62 of 244)

Coverage File chr7 (63 of 244)

Coverage File chr7 (64 of 244)

Coverage File chr7 (65 of 244)

Coverage File chr7 (66 of 244)

Coverage File chr7 (67 of 244)

Coverage File chr7 (68 of 244)

Coverage File chr7 (69 of 244)

Coverage File chr7 (70 of 244)

Coverage File chr7 (71 of 244)

Coverage File chr7 (72 of 244)

Coverage File chr7 (73 of 244)

Coverage File chr7 (74 of 244)

Coverage File chr7 (75 of 244)

Coverage File chr7 (76 of 244)

Coverage File chr7 (77 of 244)

Coverage File chr7 (78 of 244)

Coverage File chr7 (79 of 244)

Coverage File chr7 (80 of 244)

Coverage File chr7 (81 of 244)

Coverage File chr7 (82 of 244)

Coverage File chr7 (83 of 244)

Coverage File chr7 (84 of 244)

Coverage File chr7 (85 of 244)

Coverage File chr7 (86 of 244)

Coverage File chr7 (87 of 244)

Coverage File chr7 (88 of 244)

Coverage File chr7 (89 of 244)

Coverage File chr7 (90 of 244)

Coverage File chr7 (91 of 244)

Coverage File chr7 (92 of 244)

Coverage File chr7 (93 of 244)

Coverage File chr7 (94 of 244)

Coverage File chr7 (95 of 244)

Coverage File chr7 (96 of 244)

Coverage File chr7 (97 of 244)

Coverage File chr7 (98 of 244)

Coverage File chr7 (99 of 244)

Coverage File chr7 (100 of 244)

Coverage File chr7 (101 of 244)

Coverage File chr7 (102 of 244)

Coverage File chr7 (103 of 244)

Coverage File chr7 (104 of 244)

Coverage File chr7 (105 of 244)

Coverage File chr7 (106 of 244)

Coverage File chr7 (107 of 244)

Coverage File chr7 (108 of 244)

Coverage File chr7 (109 of 244)

Coverage File chr7 (110 of 244)

Coverage File chr7 (111 of 244)

Coverage File chr7 (112 of 244)

Coverage File chr7 (113 of 244)

Coverage File chr7 (114 of 244)

Coverage File chr7 (115 of 244)

Coverage File chr7 (116 of 244)

Coverage File chr7 (117 of 244)

Coverage File chr7 (118 of 244)

Coverage File chr7 (119 of 244)

Coverage File chr7 (120 of 244)

Coverage File chr7 (121 of 244)

Coverage File chr7 (122 of 244)

Coverage File chr7 (123 of 244)

Coverage File chr7 (124 of 244)

Coverage File chr7 (125 of 244)

Coverage File chr7 (126 of 244)

Coverage File chr7 (127 of 244)

Coverage File chr7 (128 of 244)

Coverage File chr7 (129 of 244)

Coverage File chr7 (130 of 244)

Coverage File chr7 (131 of 244)

Coverage File chr7 (132 of 244)

Coverage File chr7 (133 of 244)

Coverage File chr7 (134 of 244)

Coverage File chr7 (135 of 244)

Coverage File chr7 (136 of 244)

Coverage File chr7 (137 of 244)

Coverage File chr7 (138 of 244)

Coverage File chr7 (139 of 244)

Coverage File chr7 (140 of 244)

Coverage File chr7 (141 of 244)

Coverage File chr7 (142 of 244)

Coverage File chr7 (143 of 244)

Coverage File chr7 (144 of 244)

Coverage File chr7 (145 of 244)

Coverage File chr7 (146 of 244)

Coverage File chr7 (147 of 244)

Coverage File chr7 (148 of 244)

Coverage File chr7 (149 of 244)

Coverage File chr7 (150 of 244)

Coverage File chr7 (151 of 244)

Coverage File chr7 (152 of 244)

Coverage File chr7 (153 of 244)

Coverage File chr7 (154 of 244)

Coverage File chr7 (155 of 244)

Coverage File chr7 (156 of 244)

Coverage File chr7 (157 of 244)

Coverage File chr7 (158 of 244)

Coverage File chr7 (159 of 244)

Coverage File chr7 (160 of 244)

Coverage File chr7 (161 of 244)

Coverage File chr7 (162 of 244)

Coverage File chr7 (163 of 244)

Coverage File chr7 (164 of 244)

Coverage File chr7 (165 of 244)

Coverage File chr7 (166 of 244)

Coverage File chr7 (167 of 244)

Coverage File chr7 (168 of 244)

Coverage File chr7 (169 of 244)

Coverage File chr7 (170 of 244)

Coverage File chr7 (171 of 244)

Coverage File chr7 (172 of 244)

Coverage File chr7 (173 of 244)

Coverage File chr7 (174 of 244)

Coverage File chr7 (175 of 244)

Coverage File chr7 (176 of 244)

Coverage File chr7 (177 of 244)

Coverage File chr7 (178 of 244)

Coverage File chr7 (179 of 244)

Coverage File chr7 (180 of 244)

Coverage File chr7 (181 of 244)

Coverage File chr7 (182 of 244)

Coverage File chr7 (183 of 244)

Coverage File chr7 (184 of 244)

Coverage File chr7 (185 of 244)

Coverage File chr7 (186 of 244)

Coverage File chr7 (187 of 244)

Coverage File chr7 (188 of 244)

Coverage File chr7 (189 of 244)

Coverage File chr7 (190 of 244)

Coverage File chr7 (191 of 244)

Coverage File chr7 (192 of 244)

Coverage File chr7 (193 of 244)

Coverage File chr7 (194 of 244)

Coverage File chr7 (195 of 244)

Coverage File chr7 (196 of 244)

Coverage File chr7 (197 of 244)

Coverage File chr7 (198 of 244)

Coverage File chr7 (199 of 244)

Coverage File chr7 (200 of 244)

Coverage File chr7 (201 of 244)

Coverage File chr7 (202 of 244)

Coverage File chr7 (203 of 244)

Coverage File chr7 (204 of 244)

Coverage File chr7 (205 of 244)

Coverage File chr7 (206 of 244)

Coverage File chr7 (207 of 244)

Coverage File chr7 (208 of 244)

Coverage File chr7 (209 of 244)

Coverage File chr7 (210 of 244)

Coverage File chr7 (211 of 244)

Coverage File chr7 (212 of 244)

Coverage File chr7 (213 of 244)

Coverage File chr7 (214 of 244)

Coverage File chr7 (215 of 244)

Coverage File chr7 (216 of 244)

Coverage File chr7 (217 of 244)

Coverage File chr7 (218 of 244)

Coverage File chr7 (219 of 244)

Coverage File chr7 (220 of 244)

Coverage File chr7 (221 of 244)

Coverage File chr7 (222 of 244)

Coverage File chr7 (223 of 244)

Coverage File chr7 (224 of 244)

Coverage File chr7 (225 of 244)

Coverage File chr7 (226 of 244)

Coverage File chr7 (227 of 244)

Coverage File chr7 (228 of 244)

Coverage File chr7 (229 of 244)

Coverage File chr7 (230 of 244)

Coverage File chr7 (231 of 244)

Coverage File chr7 (232 of 244)

Coverage File chr7 (233 of 244)

Coverage File chr7 (234 of 244)

Coverage File chr7 (235 of 244)

Coverage File chr7 (236 of 244)

Coverage File chr7 (237 of 244)

Coverage File chr7 (238 of 244)

Coverage File chr7 (239 of 244)

Coverage File chr7 (240 of 244)

Coverage File chr7 (241 of 244)

Coverage File chr7 (242 of 244)

Coverage File chr7 (243 of 244)

Coverage File chr7 (244 of 244)

Kmer Bias chr8 (18 of 21)

chr8 
Coverage File chr8 (1 of 244)

Coverage File chr8 (2 of 244)

Coverage File chr8 (3 of 244)

Coverage File chr8 (4 of 244)

Coverage File chr8 (5 of 244)

Coverage File chr8 (6 of 244)

Coverage File chr8 (7 of 244)

Coverage File chr8 (8 of 244)

Coverage File chr8 (9 of 244)

Coverage File chr8 (10 of 244)

Coverage File chr8 (11 of 244)

Coverage File chr8 (12 of 244)

Coverage File chr8 (13 of 244)

Coverage File chr8 (14 of 244)

Coverage File chr8 (15 of 244)

Coverage File chr8 (16 of 244)

Coverage File chr8 (17 of 244)

Coverage File chr8 (18 of 244)

Coverage File chr8 (19 of 244)

Coverage File chr8 (20 of 244)

Coverage File chr8 (21 of 244)

Coverage File chr8 (22 of 244)

Coverage File chr8 (23 of 244)

Coverage File chr8 (24 of 244)

Coverage File chr8 (25 of 244)

Coverage File chr8 (26 of 244)

Coverage File chr8 (27 of 244)

Coverage File chr8 (28 of 244)

Coverage File chr8 (29 of 244)

Coverage File chr8 (30 of 244)

Coverage File chr8 (31 of 244)

Coverage File chr8 (32 of 244)

Coverage File chr8 (33 of 244)

Coverage File chr8 (34 of 244)

Coverage File chr8 (35 of 244)

Coverage File chr8 (36 of 244)

Coverage File chr8 (37 of 244)

Coverage File chr8 (38 of 244)

Coverage File chr8 (39 of 244)

Coverage File chr8 (40 of 244)

Coverage File chr8 (41 of 244)

Coverage File chr8 (42 of 244)

Coverage File chr8 (43 of 244)

Coverage File chr8 (44 of 244)

Coverage File chr8 (45 of 244)

Coverage File chr8 (46 of 244)

Coverage File chr8 (47 of 244)

Coverage File chr8 (48 of 244)

Coverage File chr8 (49 of 244)

Coverage File chr8 (50 of 244)

Coverage File chr8 (51 of 244)

Coverage File chr8 (52 of 244)

Coverage File chr8 (53 of 244)

Coverage File chr8 (54 of 244)

Coverage File chr8 (55 of 244)

Coverage File chr8 (56 of 244)

Coverage File chr8 (57 of 244)

Coverage File chr8 (58 of 244)

Coverage File chr8 (59 of 244)

Coverage File chr8 (60 of 244)

Coverage File chr8 (61 of 244)

Coverage File chr8 (62 of 244)

Coverage File chr8 (63 of 244)

Coverage File chr8 (64 of 244)

Coverage File chr8 (65 of 244)

Coverage File chr8 (66 of 244)

Coverage File chr8 (67 of 244)

Coverage File chr8 (68 of 244)

Coverage File chr8 (69 of 244)

Coverage File chr8 (70 of 244)

Coverage File chr8 (71 of 244)

Coverage File chr8 (72 of 244)

Coverage File chr8 (73 of 244)

Coverage File chr8 (74 of 244)

Coverage File chr8 (75 of 244)

Coverage File chr8 (76 of 244)

Coverage File chr8 (77 of 244)

Coverage File chr8 (78 of 244)

Coverage File chr8 (79 of 244)

Coverage File chr8 (80 of 244)

Coverage File chr8 (81 of 244)

Coverage File chr8 (82 of 244)

Coverage File chr8 (83 of 244)

Coverage File chr8 (84 of 244)

Coverage File chr8 (85 of 244)

Coverage File chr8 (86 of 244)

Coverage File chr8 (87 of 244)

Coverage File chr8 (88 of 244)

Coverage File chr8 (89 of 244)

Coverage File chr8 (90 of 244)

Coverage File chr8 (91 of 244)

Coverage File chr8 (92 of 244)

Coverage File chr8 (93 of 244)

Coverage File chr8 (94 of 244)

Coverage File chr8 (95 of 244)

Coverage File chr8 (96 of 244)

Coverage File chr8 (97 of 244)

Coverage File chr8 (98 of 244)

Coverage File chr8 (99 of 244)

Coverage File chr8 (100 of 244)

Coverage File chr8 (101 of 244)

Coverage File chr8 (102 of 244)

Coverage File chr8 (103 of 244)

Coverage File chr8 (104 of 244)

Coverage File chr8 (105 of 244)

Coverage File chr8 (106 of 244)

Coverage File chr8 (107 of 244)

Coverage File chr8 (108 of 244)

Coverage File chr8 (109 of 244)

Coverage File chr8 (110 of 244)

Coverage File chr8 (111 of 244)

Coverage File chr8 (112 of 244)

Coverage File chr8 (113 of 244)

Coverage File chr8 (114 of 244)

Coverage File chr8 (115 of 244)

Coverage File chr8 (116 of 244)

Coverage File chr8 (117 of 244)

Coverage File chr8 (118 of 244)

Coverage File chr8 (119 of 244)

Coverage File chr8 (120 of 244)

Coverage File chr8 (121 of 244)

Coverage File chr8 (122 of 244)

Coverage File chr8 (123 of 244)

Coverage File chr8 (124 of 244)

Coverage File chr8 (125 of 244)

Coverage File chr8 (126 of 244)

Coverage File chr8 (127 of 244)

Coverage File chr8 (128 of 244)

Coverage File chr8 (129 of 244)

Coverage File chr8 (130 of 244)

Coverage File chr8 (131 of 244)

Coverage File chr8 (132 of 244)

Coverage File chr8 (133 of 244)

Coverage File chr8 (134 of 244)

Coverage File chr8 (135 of 244)

Coverage File chr8 (136 of 244)

Coverage File chr8 (137 of 244)

Coverage File chr8 (138 of 244)

Coverage File chr8 (139 of 244)

Coverage File chr8 (140 of 244)

Coverage File chr8 (141 of 244)

Coverage File chr8 (142 of 244)

Coverage File chr8 (143 of 244)

Coverage File chr8 (144 of 244)

Coverage File chr8 (145 of 244)

Coverage File chr8 (146 of 244)

Coverage File chr8 (147 of 244)

Coverage File chr8 (148 of 244)

Coverage File chr8 (149 of 244)

Coverage File chr8 (150 of 244)

Coverage File chr8 (151 of 244)

Coverage File chr8 (152 of 244)

Coverage File chr8 (153 of 244)

Coverage File chr8 (154 of 244)

Coverage File chr8 (155 of 244)

Coverage File chr8 (156 of 244)

Coverage File chr8 (157 of 244)

Coverage File chr8 (158 of 244)

Coverage File chr8 (159 of 244)

Coverage File chr8 (160 of 244)

Coverage File chr8 (161 of 244)

Coverage File chr8 (162 of 244)

Coverage File chr8 (163 of 244)

Coverage File chr8 (164 of 244)

Coverage File chr8 (165 of 244)

Coverage File chr8 (166 of 244)

Coverage File chr8 (167 of 244)

Coverage File chr8 (168 of 244)

Coverage File chr8 (169 of 244)

Coverage File chr8 (170 of 244)

Coverage File chr8 (171 of 244)

Coverage File chr8 (172 of 244)

Coverage File chr8 (173 of 244)

Coverage File chr8 (174 of 244)

Coverage File chr8 (175 of 244)

Coverage File chr8 (176 of 244)

Coverage File chr8 (177 of 244)

Coverage File chr8 (178 of 244)

Coverage File chr8 (179 of 244)

Coverage File chr8 (180 of 244)

Coverage File chr8 (181 of 244)

Coverage File chr8 (182 of 244)

Coverage File chr8 (183 of 244)

Coverage File chr8 (184 of 244)

Coverage File chr8 (185 of 244)

Coverage File chr8 (186 of 244)

Coverage File chr8 (187 of 244)

Coverage File chr8 (188 of 244)

Coverage File chr8 (189 of 244)

Coverage File chr8 (190 of 244)

Coverage File chr8 (191 of 244)

Coverage File chr8 (192 of 244)

Coverage File chr8 (193 of 244)

Coverage File chr8 (194 of 244)

Coverage File chr8 (195 of 244)

Coverage File chr8 (196 of 244)

Coverage File chr8 (197 of 244)

Coverage File chr8 (198 of 244)

Coverage File chr8 (199 of 244)

Coverage File chr8 (200 of 244)

Coverage File chr8 (201 of 244)

Coverage File chr8 (202 of 244)

Coverage File chr8 (203 of 244)

Coverage File chr8 (204 of 244)

Coverage File chr8 (205 of 244)

Coverage File chr8 (206 of 244)

Coverage File chr8 (207 of 244)

Coverage File chr8 (208 of 244)

Coverage File chr8 (209 of 244)

Coverage File chr8 (210 of 244)

Coverage File chr8 (211 of 244)

Coverage File chr8 (212 of 244)

Coverage File chr8 (213 of 244)

Coverage File chr8 (214 of 244)

Coverage File chr8 (215 of 244)

Coverage File chr8 (216 of 244)

Coverage File chr8 (217 of 244)

Coverage File chr8 (218 of 244)

Coverage File chr8 (219 of 244)

Coverage File chr8 (220 of 244)

Coverage File chr8 (221 of 244)

Coverage File chr8 (222 of 244)

Coverage File chr8 (223 of 244)

Coverage File chr8 (224 of 244)

Coverage File chr8 (225 of 244)

Coverage File chr8 (226 of 244)

Coverage File chr8 (227 of 244)

Coverage File chr8 (228 of 244)

Coverage File chr8 (229 of 244)

Coverage File chr8 (230 of 244)

Coverage File chr8 (231 of 244)

Coverage File chr8 (232 of 244)

Coverage File chr8 (233 of 244)

Coverage File chr8 (234 of 244)

Coverage File chr8 (235 of 244)

Coverage File chr8 (236 of 244)

Coverage File chr8 (237 of 244)

Coverage File chr8 (238 of 244)

Coverage File chr8 (239 of 244)

Coverage File chr8 (240 of 244)

Coverage File chr8 (241 of 244)

Coverage File chr8 (242 of 244)

Coverage File chr8 (243 of 244)

Coverage File chr8 (244 of 244)

Kmer Bias chr9 (19 of 21)

chr9 
Coverage File chr9 (1 of 244)

Coverage File chr9 (2 of 244)

Coverage File chr9 (3 of 244)

Coverage File chr9 (4 of 244)

Coverage File chr9 (5 of 244)

Coverage File chr9 (6 of 244)

Coverage File chr9 (7 of 244)

Coverage File chr9 (8 of 244)

Coverage File chr9 (9 of 244)

Coverage File chr9 (10 of 244)

Coverage File chr9 (11 of 244)

Coverage File chr9 (12 of 244)

Coverage File chr9 (13 of 244)

Coverage File chr9 (14 of 244)

Coverage File chr9 (15 of 244)

Coverage File chr9 (16 of 244)

Coverage File chr9 (17 of 244)

Coverage File chr9 (18 of 244)

Coverage File chr9 (19 of 244)

Coverage File chr9 (20 of 244)

Coverage File chr9 (21 of 244)

Coverage File chr9 (22 of 244)

Coverage File chr9 (23 of 244)

Coverage File chr9 (24 of 244)

Coverage File chr9 (25 of 244)

Coverage File chr9 (26 of 244)

Coverage File chr9 (27 of 244)

Coverage File chr9 (28 of 244)

Coverage File chr9 (29 of 244)

Coverage File chr9 (30 of 244)

Coverage File chr9 (31 of 244)

Coverage File chr9 (32 of 244)

Coverage File chr9 (33 of 244)

Coverage File chr9 (34 of 244)

Coverage File chr9 (35 of 244)

Coverage File chr9 (36 of 244)

Coverage File chr9 (37 of 244)

Coverage File chr9 (38 of 244)

Coverage File chr9 (39 of 244)

Coverage File chr9 (40 of 244)

Coverage File chr9 (41 of 244)

Coverage File chr9 (42 of 244)

Coverage File chr9 (43 of 244)

Coverage File chr9 (44 of 244)

Coverage File chr9 (45 of 244)

Coverage File chr9 (46 of 244)

Coverage File chr9 (47 of 244)

Coverage File chr9 (48 of 244)

Coverage File chr9 (49 of 244)

Coverage File chr9 (50 of 244)

Coverage File chr9 (51 of 244)

Coverage File chr9 (52 of 244)

Coverage File chr9 (53 of 244)

Coverage File chr9 (54 of 244)

Coverage File chr9 (55 of 244)

Coverage File chr9 (56 of 244)

Coverage File chr9 (57 of 244)

Coverage File chr9 (58 of 244)

Coverage File chr9 (59 of 244)

Coverage File chr9 (60 of 244)

Coverage File chr9 (61 of 244)

Coverage File chr9 (62 of 244)

Coverage File chr9 (63 of 244)

Coverage File chr9 (64 of 244)

Coverage File chr9 (65 of 244)

Coverage File chr9 (66 of 244)

Coverage File chr9 (67 of 244)

Coverage File chr9 (68 of 244)

Coverage File chr9 (69 of 244)

Coverage File chr9 (70 of 244)

Coverage File chr9 (71 of 244)

Coverage File chr9 (72 of 244)

Coverage File chr9 (73 of 244)

Coverage File chr9 (74 of 244)

Coverage File chr9 (75 of 244)

Coverage File chr9 (76 of 244)

Coverage File chr9 (77 of 244)

Coverage File chr9 (78 of 244)

Coverage File chr9 (79 of 244)

Coverage File chr9 (80 of 244)

Coverage File chr9 (81 of 244)

Coverage File chr9 (82 of 244)

Coverage File chr9 (83 of 244)

Coverage File chr9 (84 of 244)

Coverage File chr9 (85 of 244)

Coverage File chr9 (86 of 244)

Coverage File chr9 (87 of 244)

Coverage File chr9 (88 of 244)

Coverage File chr9 (89 of 244)

Coverage File chr9 (90 of 244)

Coverage File chr9 (91 of 244)

Coverage File chr9 (92 of 244)

Coverage File chr9 (93 of 244)

Coverage File chr9 (94 of 244)

Coverage File chr9 (95 of 244)

Coverage File chr9 (96 of 244)

Coverage File chr9 (97 of 244)

Coverage File chr9 (98 of 244)

Coverage File chr9 (99 of 244)

Coverage File chr9 (100 of 244)

Coverage File chr9 (101 of 244)

Coverage File chr9 (102 of 244)

Coverage File chr9 (103 of 244)

Coverage File chr9 (104 of 244)

Coverage File chr9 (105 of 244)

Coverage File chr9 (106 of 244)

Coverage File chr9 (107 of 244)

Coverage File chr9 (108 of 244)

Coverage File chr9 (109 of 244)

Coverage File chr9 (110 of 244)

Coverage File chr9 (111 of 244)

Coverage File chr9 (112 of 244)

Coverage File chr9 (113 of 244)

Coverage File chr9 (114 of 244)

Coverage File chr9 (115 of 244)

Coverage File chr9 (116 of 244)

Coverage File chr9 (117 of 244)

Coverage File chr9 (118 of 244)

Coverage File chr9 (119 of 244)

Coverage File chr9 (120 of 244)

Coverage File chr9 (121 of 244)

Coverage File chr9 (122 of 244)

Coverage File chr9 (123 of 244)

Coverage File chr9 (124 of 244)

Coverage File chr9 (125 of 244)

Coverage File chr9 (126 of 244)

Coverage File chr9 (127 of 244)

Coverage File chr9 (128 of 244)

Coverage File chr9 (129 of 244)

Coverage File chr9 (130 of 244)

Coverage File chr9 (131 of 244)

Coverage File chr9 (132 of 244)

Coverage File chr9 (133 of 244)

Coverage File chr9 (134 of 244)

Coverage File chr9 (135 of 244)

Coverage File chr9 (136 of 244)

Coverage File chr9 (137 of 244)

Coverage File chr9 (138 of 244)

Coverage File chr9 (139 of 244)

Coverage File chr9 (140 of 244)

Coverage File chr9 (141 of 244)

Coverage File chr9 (142 of 244)

Coverage File chr9 (143 of 244)

Coverage File chr9 (144 of 244)

Coverage File chr9 (145 of 244)

Coverage File chr9 (146 of 244)

Coverage File chr9 (147 of 244)

Coverage File chr9 (148 of 244)

Coverage File chr9 (149 of 244)

Coverage File chr9 (150 of 244)

Coverage File chr9 (151 of 244)

Coverage File chr9 (152 of 244)

Coverage File chr9 (153 of 244)

Coverage File chr9 (154 of 244)

Coverage File chr9 (155 of 244)

Coverage File chr9 (156 of 244)

Coverage File chr9 (157 of 244)

Coverage File chr9 (158 of 244)

Coverage File chr9 (159 of 244)

Coverage File chr9 (160 of 244)

Coverage File chr9 (161 of 244)

Coverage File chr9 (162 of 244)

Coverage File chr9 (163 of 244)

Coverage File chr9 (164 of 244)

Coverage File chr9 (165 of 244)

Coverage File chr9 (166 of 244)

Coverage File chr9 (167 of 244)

Coverage File chr9 (168 of 244)

Coverage File chr9 (169 of 244)

Coverage File chr9 (170 of 244)

Coverage File chr9 (171 of 244)

Coverage File chr9 (172 of 244)

Coverage File chr9 (173 of 244)

Coverage File chr9 (174 of 244)

Coverage File chr9 (175 of 244)

Coverage File chr9 (176 of 244)

Coverage File chr9 (177 of 244)

Coverage File chr9 (178 of 244)

Coverage File chr9 (179 of 244)

Coverage File chr9 (180 of 244)

Coverage File chr9 (181 of 244)

Coverage File chr9 (182 of 244)

Coverage File chr9 (183 of 244)

Coverage File chr9 (184 of 244)

Coverage File chr9 (185 of 244)

Coverage File chr9 (186 of 244)

Coverage File chr9 (187 of 244)

Coverage File chr9 (188 of 244)

Coverage File chr9 (189 of 244)

Coverage File chr9 (190 of 244)

Coverage File chr9 (191 of 244)

Coverage File chr9 (192 of 244)

Coverage File chr9 (193 of 244)

Coverage File chr9 (194 of 244)

Coverage File chr9 (195 of 244)

Coverage File chr9 (196 of 244)

Coverage File chr9 (197 of 244)

Coverage File chr9 (198 of 244)

Coverage File chr9 (199 of 244)

Coverage File chr9 (200 of 244)

Coverage File chr9 (201 of 244)

Coverage File chr9 (202 of 244)

Coverage File chr9 (203 of 244)

Coverage File chr9 (204 of 244)

Coverage File chr9 (205 of 244)

Coverage File chr9 (206 of 244)

Coverage File chr9 (207 of 244)

Coverage File chr9 (208 of 244)

Coverage File chr9 (209 of 244)

Coverage File chr9 (210 of 244)

Coverage File chr9 (211 of 244)

Coverage File chr9 (212 of 244)

Coverage File chr9 (213 of 244)

Coverage File chr9 (214 of 244)

Coverage File chr9 (215 of 244)

Coverage File chr9 (216 of 244)

Coverage File chr9 (217 of 244)

Coverage File chr9 (218 of 244)

Coverage File chr9 (219 of 244)

Coverage File chr9 (220 of 244)

Coverage File chr9 (221 of 244)

Coverage File chr9 (222 of 244)

Coverage File chr9 (223 of 244)

Coverage File chr9 (224 of 244)

Coverage File chr9 (225 of 244)

Coverage File chr9 (226 of 244)

Coverage File chr9 (227 of 244)

Coverage File chr9 (228 of 244)

Coverage File chr9 (229 of 244)

Coverage File chr9 (230 of 244)

Coverage File chr9 (231 of 244)

Coverage File chr9 (232 of 244)

Coverage File chr9 (233 of 244)

Coverage File chr9 (234 of 244)

Coverage File chr9 (235 of 244)

Coverage File chr9 (236 of 244)

Coverage File chr9 (237 of 244)

Coverage File chr9 (238 of 244)

Coverage File chr9 (239 of 244)

Coverage File chr9 (240 of 244)

Coverage File chr9 (241 of 244)

Coverage File chr9 (242 of 244)

Coverage File chr9 (243 of 244)

Coverage File chr9 (244 of 244)

Kmer Bias chrX (20 of 21)

chrX 
Coverage File chrX (1 of 244)

Coverage File chrX (2 of 244)

Coverage File chrX (3 of 244)

Coverage File chrX (4 of 244)

Coverage File chrX (5 of 244)

Coverage File chrX (6 of 244)

Coverage File chrX (7 of 244)

Coverage File chrX (8 of 244)

Coverage File chrX (9 of 244)

Coverage File chrX (10 of 244)

Coverage File chrX (11 of 244)

Coverage File chrX (12 of 244)

Coverage File chrX (13 of 244)

Coverage File chrX (14 of 244)

Coverage File chrX (15 of 244)

Coverage File chrX (16 of 244)

Coverage File chrX (17 of 244)

Coverage File chrX (18 of 244)

Coverage File chrX (19 of 244)

Coverage File chrX (20 of 244)

Coverage File chrX (21 of 244)

Coverage File chrX (22 of 244)

Coverage File chrX (23 of 244)

Coverage File chrX (24 of 244)

Coverage File chrX (25 of 244)

Coverage File chrX (26 of 244)

Coverage File chrX (27 of 244)

Coverage File chrX (28 of 244)

Coverage File chrX (29 of 244)

Coverage File chrX (30 of 244)

Coverage File chrX (31 of 244)

Coverage File chrX (32 of 244)

Coverage File chrX (33 of 244)

Coverage File chrX (34 of 244)

Coverage File chrX (35 of 244)

Coverage File chrX (36 of 244)

Coverage File chrX (37 of 244)

Coverage File chrX (38 of 244)

Coverage File chrX (39 of 244)

Coverage File chrX (40 of 244)

Coverage File chrX (41 of 244)

Coverage File chrX (42 of 244)

Coverage File chrX (43 of 244)

Coverage File chrX (44 of 244)

Coverage File chrX (45 of 244)

Coverage File chrX (46 of 244)

Coverage File chrX (47 of 244)

Coverage File chrX (48 of 244)

Coverage File chrX (49 of 244)

Coverage File chrX (50 of 244)

Coverage File chrX (51 of 244)

Coverage File chrX (52 of 244)

Coverage File chrX (53 of 244)

Coverage File chrX (54 of 244)

Coverage File chrX (55 of 244)

Coverage File chrX (56 of 244)

Coverage File chrX (57 of 244)

Coverage File chrX (58 of 244)

Coverage File chrX (59 of 244)

Coverage File chrX (60 of 244)

Coverage File chrX (61 of 244)

Coverage File chrX (62 of 244)

Coverage File chrX (63 of 244)

Coverage File chrX (64 of 244)

Coverage File chrX (65 of 244)

Coverage File chrX (66 of 244)

Coverage File chrX (67 of 244)

Coverage File chrX (68 of 244)

Coverage File chrX (69 of 244)

Coverage File chrX (70 of 244)

Coverage File chrX (71 of 244)

Coverage File chrX (72 of 244)

Coverage File chrX (73 of 244)

Coverage File chrX (74 of 244)

Coverage File chrX (75 of 244)

Coverage File chrX (76 of 244)

Coverage File chrX (77 of 244)

Coverage File chrX (78 of 244)

Coverage File chrX (79 of 244)

Coverage File chrX (80 of 244)

Coverage File chrX (81 of 244)

Coverage File chrX (82 of 244)

Coverage File chrX (83 of 244)

Coverage File chrX (84 of 244)

Coverage File chrX (85 of 244)

Coverage File chrX (86 of 244)

Coverage File chrX (87 of 244)

Coverage File chrX (88 of 244)

Coverage File chrX (89 of 244)

Coverage File chrX (90 of 244)

Coverage File chrX (91 of 244)

Coverage File chrX (92 of 244)

Coverage File chrX (93 of 244)

Coverage File chrX (94 of 244)

Coverage File chrX (95 of 244)

Coverage File chrX (96 of 244)

Coverage File chrX (97 of 244)

Coverage File chrX (98 of 244)

Coverage File chrX (99 of 244)

Coverage File chrX (100 of 244)

Coverage File chrX (101 of 244)

Coverage File chrX (102 of 244)

Coverage File chrX (103 of 244)

Coverage File chrX (104 of 244)

Coverage File chrX (105 of 244)

Coverage File chrX (106 of 244)

Coverage File chrX (107 of 244)

Coverage File chrX (108 of 244)

Coverage File chrX (109 of 244)

Coverage File chrX (110 of 244)

Coverage File chrX (111 of 244)

Coverage File chrX (112 of 244)

Coverage File chrX (113 of 244)

Coverage File chrX (114 of 244)

Coverage File chrX (115 of 244)

Coverage File chrX (116 of 244)

Coverage File chrX (117 of 244)

Coverage File chrX (118 of 244)

Coverage File chrX (119 of 244)

Coverage File chrX (120 of 244)

Coverage File chrX (121 of 244)

Coverage File chrX (122 of 244)

Coverage File chrX (123 of 244)

Coverage File chrX (124 of 244)

Coverage File chrX (125 of 244)

Coverage File chrX (126 of 244)

Coverage File chrX (127 of 244)

Coverage File chrX (128 of 244)

Coverage File chrX (129 of 244)

Coverage File chrX (130 of 244)

Coverage File chrX (131 of 244)

Coverage File chrX (132 of 244)

Coverage File chrX (133 of 244)

Coverage File chrX (134 of 244)

Coverage File chrX (135 of 244)

Coverage File chrX (136 of 244)

Coverage File chrX (137 of 244)

Coverage File chrX (138 of 244)

Coverage File chrX (139 of 244)

Coverage File chrX (140 of 244)

Coverage File chrX (141 of 244)

Coverage File chrX (142 of 244)

Coverage File chrX (143 of 244)

Coverage File chrX (144 of 244)

Coverage File chrX (145 of 244)

Coverage File chrX (146 of 244)

Coverage File chrX (147 of 244)

Coverage File chrX (148 of 244)

Coverage File chrX (149 of 244)

Coverage File chrX (150 of 244)

Coverage File chrX (151 of 244)

Coverage File chrX (152 of 244)

Coverage File chrX (153 of 244)

Coverage File chrX (154 of 244)

Coverage File chrX (155 of 244)

Coverage File chrX (156 of 244)

Coverage File chrX (157 of 244)

Coverage File chrX (158 of 244)

Coverage File chrX (159 of 244)

Coverage File chrX (160 of 244)

Coverage File chrX (161 of 244)

Coverage File chrX (162 of 244)

Coverage File chrX (163 of 244)

Coverage File chrX (164 of 244)

Coverage File chrX (165 of 244)

Coverage File chrX (166 of 244)

Coverage File chrX (167 of 244)

Coverage File chrX (168 of 244)

Coverage File chrX (169 of 244)

Coverage File chrX (170 of 244)

Coverage File chrX (171 of 244)

Coverage File chrX (172 of 244)

Coverage File chrX (173 of 244)

Coverage File chrX (174 of 244)

Coverage File chrX (175 of 244)

Coverage File chrX (176 of 244)

Coverage File chrX (177 of 244)

Coverage File chrX (178 of 244)

Coverage File chrX (179 of 244)

Coverage File chrX (180 of 244)

Coverage File chrX (181 of 244)

Coverage File chrX (182 of 244)

Coverage File chrX (183 of 244)

Coverage File chrX (184 of 244)

Coverage File chrX (185 of 244)

Coverage File chrX (186 of 244)

Coverage File chrX (187 of 244)

Coverage File chrX (188 of 244)

Coverage File chrX (189 of 244)

Coverage File chrX (190 of 244)

Coverage File chrX (191 of 244)

Coverage File chrX (192 of 244)

Coverage File chrX (193 of 244)

Coverage File chrX (194 of 244)

Coverage File chrX (195 of 244)

Coverage File chrX (196 of 244)

Coverage File chrX (197 of 244)

Coverage File chrX (198 of 244)

Coverage File chrX (199 of 244)

Coverage File chrX (200 of 244)

Coverage File chrX (201 of 244)

Coverage File chrX (202 of 244)

Coverage File chrX (203 of 244)

Coverage File chrX (204 of 244)

Coverage File chrX (205 of 244)

Coverage File chrX (206 of 244)

Coverage File chrX (207 of 244)

Coverage File chrX (208 of 244)

Coverage File chrX (209 of 244)

Coverage File chrX (210 of 244)

Coverage File chrX (211 of 244)

Coverage File chrX (212 of 244)

Coverage File chrX (213 of 244)

Coverage File chrX (214 of 244)

Coverage File chrX (215 of 244)

Coverage File chrX (216 of 244)

Coverage File chrX (217 of 244)

Coverage File chrX (218 of 244)

Coverage File chrX (219 of 244)

Coverage File chrX (220 of 244)

Coverage File chrX (221 of 244)

Coverage File chrX (222 of 244)

Coverage File chrX (223 of 244)

Coverage File chrX (224 of 244)

Coverage File chrX (225 of 244)

Coverage File chrX (226 of 244)

Coverage File chrX (227 of 244)

Coverage File chrX (228 of 244)

Coverage File chrX (229 of 244)

Coverage File chrX (230 of 244)

Coverage File chrX (231 of 244)

Coverage File chrX (232 of 244)

Coverage File chrX (233 of 244)

Coverage File chrX (234 of 244)

Coverage File chrX (235 of 244)

Coverage File chrX (236 of 244)

Coverage File chrX (237 of 244)

Coverage File chrX (238 of 244)

Coverage File chrX (239 of 244)

Coverage File chrX (240 of 244)

Coverage File chrX (241 of 244)

Coverage File chrX (242 of 244)

Coverage File chrX (243 of 244)

Coverage File chrX (244 of 244)

Kmer Bias chrY (21 of 21)

chrY 
Coverage File chrY (1 of 244)

Coverage File chrY (2 of 244)

Coverage File chrY (3 of 244)

Coverage File chrY (4 of 244)

Coverage File chrY (5 of 244)

Coverage File chrY (6 of 244)

Coverage File chrY (7 of 244)

Coverage File chrY (8 of 244)

Coverage File chrY (9 of 244)

Coverage File chrY (10 of 244)

Coverage File chrY (11 of 244)

Coverage File chrY (12 of 244)

Coverage File chrY (13 of 244)

Coverage File chrY (14 of 244)

Coverage File chrY (15 of 244)

Coverage File chrY (16 of 244)

Coverage File chrY (17 of 244)

Coverage File chrY (18 of 244)

Coverage File chrY (19 of 244)

Coverage File chrY (20 of 244)

Coverage File chrY (21 of 244)

Coverage File chrY (22 of 244)

Coverage File chrY (23 of 244)

Coverage File chrY (24 of 244)

Coverage File chrY (25 of 244)

Coverage File chrY (26 of 244)

Coverage File chrY (27 of 244)

Coverage File chrY (28 of 244)

Coverage File chrY (29 of 244)

Coverage File chrY (30 of 244)

Coverage File chrY (31 of 244)

Coverage File chrY (32 of 244)

Coverage File chrY (33 of 244)

Coverage File chrY (34 of 244)

Coverage File chrY (35 of 244)

Coverage File chrY (36 of 244)

Coverage File chrY (37 of 244)

Coverage File chrY (38 of 244)

Coverage File chrY (39 of 244)

Coverage File chrY (40 of 244)

Coverage File chrY (41 of 244)

Coverage File chrY (42 of 244)

Coverage File chrY (43 of 244)

Coverage File chrY (44 of 244)

Coverage File chrY (45 of 244)

Coverage File chrY (46 of 244)

Coverage File chrY (47 of 244)

Coverage File chrY (48 of 244)

Coverage File chrY (49 of 244)

Coverage File chrY (50 of 244)

Coverage File chrY (51 of 244)

Coverage File chrY (52 of 244)

Coverage File chrY (53 of 244)

Coverage File chrY (54 of 244)

Coverage File chrY (55 of 244)

Coverage File chrY (56 of 244)

Coverage File chrY (57 of 244)

Coverage File chrY (58 of 244)

Coverage File chrY (59 of 244)

Coverage File chrY (60 of 244)

Coverage File chrY (61 of 244)

Coverage File chrY (62 of 244)

Coverage File chrY (63 of 244)

Coverage File chrY (64 of 244)

Coverage File chrY (65 of 244)

Coverage File chrY (66 of 244)

Coverage File chrY (67 of 244)

Coverage File chrY (68 of 244)

Coverage File chrY (69 of 244)

Coverage File chrY (70 of 244)

Coverage File chrY (71 of 244)
In [6]:
proj = saveArchRProject(proj)

Saving ArchRProject...

Loading ArchRProject...

Successfully loaded ArchRProject!


                                                   / |
                                                 /    \
            .                                  /      |.
            \\\                              /        |.
              \\\                          /           `|.
                \\\                      /              |.
                  \                    /                |\
                  \\#####\           /                  ||
                ==###########>      /                   ||
                 \\##==......\    /                     ||
            ______ =       =|__ /__                     ||      \\\
        ,--' ,----`-,__ ___/'  --,-`-===================##========>
       \               '        ##_______ _____ ,--,__,=##,__   ///
        ,    __==    ___,-,__,--'#'  ==='      `-'    | ##,-/
        -,____,---'       \\####\\________________,--\\_##,/
           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
In [5]:
# call peaks 
proj<-addReproduciblePeakSet(proj, groupBy = "predictedGroup_RNA2ATACCo", reproducibility = "(n + 1)/2",
                             plot = FALSE, genomeSize = 2.7e9)

Searching For MACS2..

Found with $path!

ArchR logging to : ArchRLogs/ArchR-addReproduciblePeakSet-c65368afe94c-Date-2022-10-18_Time-11-15-33.log
If there is an issue, please report to github with logFile!

Calling Peaks with Macs2

2022-10-18 11:15:33 : Peak Calling Parameters!, 0.005 mins elapsed.


                          Group nCells nCellsUsed nReplicates nMin nMax
Astrocyte.1         Astrocyte.1   2417       2295          11  122  293
Astrocyte.2         Astrocyte.2  10926       9492          11  677 1000
Ependymal.cells Ependymal.cells    953        905          11   56  114
GABA1                     GABA1   1077       1016          11   64  118
GABA2                     GABA2   1606       1511          11  105  160
GABA3                     GABA3    405        405           5   47  104
GABA4                     GABA4   1786       1679          11  118  201
GABA5                     GABA5   1310       1238          11   77  150
GLUT1                     GLUT1    564        564          10   43  107
GLUT2                     GLUT2   2848       2669          11  182  318
GLUT3                     GLUT3   1604       1510          11   96  176
GLUT4                     GLUT4    806        756          11   58   88
GLUT5                     GLUT5      5          5           5    5    5
GLUT6                     GLUT6   2892       2708          11  191  310
GLUT7                     GLUT7   2135       2018          11  131  232
GLUT8                     GLUT8   1586       1491          11  106  167
GLUT9                     GLUT9     56         56           5   40   40
GLUT10                   GLUT10    289        289           5   57   58
GLUT11                   GLUT11      8          8           5    7    8
Meninges               Meninges   1523       1420          11  107  142
Microglia             Microglia   2329       2186          11  152  245
midVen                   midVen   1614       1519          11   98  186
Oligo.1                 Oligo.1  32624      11000          11 1000 1000
Oligo.2                 Oligo.2   1244       1175          11   73  139
OPC                         OPC   3348       3168          11  202  369
                maxPeaks
Astrocyte.1       150000
Astrocyte.2       150000
Ependymal.cells   150000
GABA1             150000
GABA2             150000
GABA3             150000
GABA4             150000
GABA5             150000
GLUT1             150000
GLUT2             150000
GLUT3             150000
GLUT4             150000
GLUT5               2500
GLUT6             150000
GLUT7             150000
GLUT8             150000
GLUT9              28000
GLUT10            144500
GLUT11              4000
Meninges          150000
Microglia         150000
midVen            150000
Oligo.1           150000
Oligo.2           150000
OPC               150000

2022-10-18 11:15:33 : Batching Peak Calls!, 0.006 mins elapsed.

2022-10-18 11:15:33 : Batch Execution w/ safelapply!, 0 mins elapsed.

2022-10-18 11:15:33 : Group 1 of 234, Calling Peaks with MACS2!, 0 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A60-1 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A60-1.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:17:33 : Group 2 of 234, Calling Peaks with MACS2!, 2.003 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A61-2 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A61-2.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:19:23 : Group 3 of 234, Calling Peaks with MACS2!, 3.83 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A58-3 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A58-3.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:21:10 : Group 4 of 234, Calling Peaks with MACS2!, 5.609 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A62-4 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A62-4.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:22:54 : Group 5 of 234, Calling Peaks with MACS2!, 7.346 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A59-5 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A59-5.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:24:26 : Group 6 of 234, Calling Peaks with MACS2!, 8.884 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A63-6 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A63-6.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:25:57 : Group 7 of 234, Calling Peaks with MACS2!, 10.401 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A64-7 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A64-7.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:27:22 : Group 8 of 234, Calling Peaks with MACS2!, 11.817 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A66-8 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A66-8.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:28:53 : Group 9 of 234, Calling Peaks with MACS2!, 13.338 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A68-9 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A68-9.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:30:20 : Group 10 of 234, Calling Peaks with MACS2!, 14.778 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A67-10 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A67-10.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:31:47 : Group 11 of 234, Calling Peaks with MACS2!, 16.229 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.1._.Mouse_DH_SEA2253A65-11 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.1._.Mouse_DH_SEA2253A65-11.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:33:09 : Group 12 of 234, Calling Peaks with MACS2!, 17.598 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A63-12 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A63-12.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:35:58 : Group 13 of 234, Calling Peaks with MACS2!, 20.417 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A59-13 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A59-13.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:38:58 : Group 14 of 234, Calling Peaks with MACS2!, 23.406 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A62-14 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A62-14.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:41:58 : Group 15 of 234, Calling Peaks with MACS2!, 26.418 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A60-15 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A60-15.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:45:26 : Group 16 of 234, Calling Peaks with MACS2!, 29.884 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A58-16 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A58-16.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:48:43 : Group 17 of 234, Calling Peaks with MACS2!, 33.168 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A61-17 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A61-17.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:51:54 : Group 18 of 234, Calling Peaks with MACS2!, 36.351 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A66-18 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A66-18.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:55:17 : Group 19 of 234, Calling Peaks with MACS2!, 39.729 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A67-19 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A67-19.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 11:58:46 : Group 20 of 234, Calling Peaks with MACS2!, 43.22 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A64-20 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A64-20.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:01:52 : Group 21 of 234, Calling Peaks with MACS2!, 46.313 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A65-21 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A65-21.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:05:01 : Group 22 of 234, Calling Peaks with MACS2!, 49.471 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Astrocyte.2._.Mouse_DH_SEA2253A68-22 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Astrocyte.2._.Mouse_DH_SEA2253A68-22.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:08:10 : Group 23 of 234, Calling Peaks with MACS2!, 52.608 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A59-23 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A59-23.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:09:23 : Group 24 of 234, Calling Peaks with MACS2!, 53.827 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A62-24 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A62-24.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:10:27 : Group 25 of 234, Calling Peaks with MACS2!, 54.889 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A58-25 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A58-25.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:11:38 : Group 26 of 234, Calling Peaks with MACS2!, 56.079 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A61-26 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A61-26.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:12:46 : Group 27 of 234, Calling Peaks with MACS2!, 57.22 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A60-27 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A60-27.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:13:52 : Group 28 of 234, Calling Peaks with MACS2!, 58.321 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A63-28 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A63-28.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:14:50 : Group 29 of 234, Calling Peaks with MACS2!, 59.287 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A69-29 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A69-29.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:16:13 : Group 30 of 234, Calling Peaks with MACS2!, 60.663 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A66-30 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A66-30.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:17:27 : Group 31 of 234, Calling Peaks with MACS2!, 61.897 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A67-31 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A67-31.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:18:38 : Group 32 of 234, Calling Peaks with MACS2!, 63.075 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A64-32 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A64-32.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:19:49 : Group 33 of 234, Calling Peaks with MACS2!, 64.266 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Ependymal.cells._.Mouse_DH_SEA2253A68-33 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Ependymal.cells._.Mouse_DH_SEA2253A68-33.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:21:01 : Group 34 of 234, Calling Peaks with MACS2!, 65.468 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A62-34 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A62-34.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:22:41 : Group 35 of 234, Calling Peaks with MACS2!, 67.131 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A60-35 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A60-35.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:24:23 : Group 36 of 234, Calling Peaks with MACS2!, 68.829 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A59-36 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A59-36.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:25:54 : Group 37 of 234, Calling Peaks with MACS2!, 70.342 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A63-37 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A63-37.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:27:18 : Group 38 of 234, Calling Peaks with MACS2!, 71.742 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A58-38 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A58-38.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:28:51 : Group 39 of 234, Calling Peaks with MACS2!, 73.292 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A61-39 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A61-39.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:30:25 : Group 40 of 234, Calling Peaks with MACS2!, 74.868 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A67-40 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A67-40.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:32:22 : Group 41 of 234, Calling Peaks with MACS2!, 76.814 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A66-41 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A66-41.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:34:30 : Group 42 of 234, Calling Peaks with MACS2!, 78.954 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A69-42 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A69-42.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:36:09 : Group 43 of 234, Calling Peaks with MACS2!, 80.602 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A65-43 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A65-43.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:37:39 : Group 44 of 234, Calling Peaks with MACS2!, 82.097 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA1._.Mouse_DH_SEA2253A68-44 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA1._.Mouse_DH_SEA2253A68-44.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:39:05 : Group 45 of 234, Calling Peaks with MACS2!, 83.533 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A60-45 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A60-45.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:40:55 : Group 46 of 234, Calling Peaks with MACS2!, 85.367 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A61-46 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A61-46.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:42:57 : Group 47 of 234, Calling Peaks with MACS2!, 87.399 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A63-47 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A63-47.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:44:38 : Group 48 of 234, Calling Peaks with MACS2!, 89.077 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A62-48 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A62-48.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:46:23 : Group 49 of 234, Calling Peaks with MACS2!, 90.823 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A58-49 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A58-49.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:48:13 : Group 50 of 234, Calling Peaks with MACS2!, 92.658 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A59-50 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A59-50.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:49:49 : Group 51 of 234, Calling Peaks with MACS2!, 94.26 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A64-51 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A64-51.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:52:02 : Group 52 of 234, Calling Peaks with MACS2!, 96.476 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A65-52 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A65-52.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:54:08 : Group 53 of 234, Calling Peaks with MACS2!, 98.575 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A67-53 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A67-53.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:56:24 : Group 54 of 234, Calling Peaks with MACS2!, 100.84 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A68-54 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A68-54.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 12:58:27 : Group 55 of 234, Calling Peaks with MACS2!, 102.897 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA2._.Mouse_DH_SEA2253A69-55 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA2._.Mouse_DH_SEA2253A69-55.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:00:21 : Group 56 of 234, Calling Peaks with MACS2!, 104.797 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA3._.1-56 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA3._.1-56.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:01:53 : Group 57 of 234, Calling Peaks with MACS2!, 106.335 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA3._.2-57 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA3._.2-57.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:03:24 : Group 58 of 234, Calling Peaks with MACS2!, 107.845 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA3._.3-58 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA3._.3-58.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:04:50 : Group 59 of 234, Calling Peaks with MACS2!, 109.277 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA3._.Mouse_DH_SEA2253A62-59 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA3._.Mouse_DH_SEA2253A62-59.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:06:01 : Group 60 of 234, Calling Peaks with MACS2!, 110.465 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA3._.Mouse_DH_SEA2253A60-60 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA3._.Mouse_DH_SEA2253A60-60.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:07:08 : Group 61 of 234, Calling Peaks with MACS2!, 111.582 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A60-61 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A60-61.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:09:47 : Group 62 of 234, Calling Peaks with MACS2!, 114.222 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A59-62 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A59-62.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:12:16 : Group 63 of 234, Calling Peaks with MACS2!, 116.714 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A62-63 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A62-63.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:14:51 : Group 64 of 234, Calling Peaks with MACS2!, 119.291 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A63-64 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A63-64.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:17:10 : Group 65 of 234, Calling Peaks with MACS2!, 121.619 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A58-65 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A58-65.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:19:17 : Group 66 of 234, Calling Peaks with MACS2!, 123.732 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A61-66 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A61-66.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:21:37 : Group 67 of 234, Calling Peaks with MACS2!, 126.068 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A64-67 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A64-67.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:24:00 : Group 68 of 234, Calling Peaks with MACS2!, 128.442 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A67-68 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A67-68.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:26:26 : Group 69 of 234, Calling Peaks with MACS2!, 130.886 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A69-69 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A69-69.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:28:44 : Group 70 of 234, Calling Peaks with MACS2!, 133.177 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A68-70 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A68-70.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:31:11 : Group 71 of 234, Calling Peaks with MACS2!, 135.629 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA4._.Mouse_DH_SEA2253A66-71 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA4._.Mouse_DH_SEA2253A66-71.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:33:45 : Group 72 of 234, Calling Peaks with MACS2!, 138.193 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A58-72 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A58-72.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:35:36 : Group 73 of 234, Calling Peaks with MACS2!, 140.044 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A63-73 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A63-73.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:37:14 : Group 74 of 234, Calling Peaks with MACS2!, 141.684 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A61-74 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A61-74.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:38:58 : Group 75 of 234, Calling Peaks with MACS2!, 143.413 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A59-75 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A59-75.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:40:30 : Group 76 of 234, Calling Peaks with MACS2!, 144.952 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A60-76 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A60-76.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:42:01 : Group 77 of 234, Calling Peaks with MACS2!, 146.466 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A62-77 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A62-77.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:43:26 : Group 78 of 234, Calling Peaks with MACS2!, 147.874 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A64-78 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A64-78.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:45:02 : Group 79 of 234, Calling Peaks with MACS2!, 149.474 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A65-79 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A65-79.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:46:42 : Group 80 of 234, Calling Peaks with MACS2!, 151.144 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A66-80 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A66-80.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:48:32 : Group 81 of 234, Calling Peaks with MACS2!, 152.978 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A67-81 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A67-81.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:50:04 : Group 82 of 234, Calling Peaks with MACS2!, 154.52 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GABA5._.Mouse_DH_SEA2253A68-82 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GABA5._.Mouse_DH_SEA2253A68-82.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:51:39 : Group 83 of 234, Calling Peaks with MACS2!, 156.102 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Other-83 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Other-83.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:53:15 : Group 84 of 234, Calling Peaks with MACS2!, 157.693 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Mouse_DH_SEA2253A59-84 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Mouse_DH_SEA2253A59-84.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:54:29 : Group 85 of 234, Calling Peaks with MACS2!, 158.929 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Mouse_DH_SEA2253A60-85 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Mouse_DH_SEA2253A60-85.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:57:59 : Group 88 of 234, Calling Peaks with MACS2!, 162.431 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Mouse_DH_SEA2253A63-88 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Mouse_DH_SEA2253A63-88.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 13:59:00 : Group 89 of 234, Calling Peaks with MACS2!, 163.438 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Mouse_DH_SEA2253A66-89 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Mouse_DH_SEA2253A66-89.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:00:41 : Group 90 of 234, Calling Peaks with MACS2!, 165.126 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Mouse_DH_SEA2253A58-90 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Mouse_DH_SEA2253A58-90.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:01:36 : Group 91 of 234, Calling Peaks with MACS2!, 166.054 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Mouse_DH_SEA2253A68-91 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Mouse_DH_SEA2253A68-91.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:02:55 : Group 92 of 234, Calling Peaks with MACS2!, 167.356 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT1._.Mouse_DH_SEA2253A67-92 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT1._.Mouse_DH_SEA2253A67-92.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:04:20 : Group 93 of 234, Calling Peaks with MACS2!, 168.786 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A60-93 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A60-93.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:06:39 : Group 94 of 234, Calling Peaks with MACS2!, 171.096 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A59-94 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A59-94.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:08:46 : Group 95 of 234, Calling Peaks with MACS2!, 173.214 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A61-95 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A61-95.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:11:07 : Group 96 of 234, Calling Peaks with MACS2!, 175.569 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A63-96 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A63-96.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:13:30 : Group 97 of 234, Calling Peaks with MACS2!, 177.947 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A62-97 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A62-97.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:15:27 : Group 98 of 234, Calling Peaks with MACS2!, 179.888 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A58-98 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A58-98.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:17:20 : Group 99 of 234, Calling Peaks with MACS2!, 181.775 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A64-99 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A64-99.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:19:36 : Group 100 of 234, Calling Peaks with MACS2!, 184.042 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A67-100 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A67-100.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:21:54 : Group 101 of 234, Calling Peaks with MACS2!, 186.339 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A69-101 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A69-101.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:24:00 : Group 102 of 234, Calling Peaks with MACS2!, 188.452 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A66-102 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A66-102.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:26:18 : Group 103 of 234, Calling Peaks with MACS2!, 190.752 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT2._.Mouse_DH_SEA2253A68-103 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT2._.Mouse_DH_SEA2253A68-103.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:28:46 : Group 104 of 234, Calling Peaks with MACS2!, 193.217 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A60-104 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A60-104.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:30:42 : Group 105 of 234, Calling Peaks with MACS2!, 195.143 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A62-105 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A62-105.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:32:21 : Group 106 of 234, Calling Peaks with MACS2!, 196.799 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A59-106 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A59-106.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:34:02 : Group 107 of 234, Calling Peaks with MACS2!, 198.485 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A61-107 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A61-107.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:35:45 : Group 108 of 234, Calling Peaks with MACS2!, 200.192 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A63-108 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A63-108.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:37:16 : Group 109 of 234, Calling Peaks with MACS2!, 201.721 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A58-109 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A58-109.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:38:57 : Group 110 of 234, Calling Peaks with MACS2!, 203.392 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A67-110 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A67-110.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:40:51 : Group 111 of 234, Calling Peaks with MACS2!, 205.296 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A66-111 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A66-111.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:42:51 : Group 112 of 234, Calling Peaks with MACS2!, 207.295 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A65-112 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A65-112.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:44:39 : Group 113 of 234, Calling Peaks with MACS2!, 209.092 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A64-113 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A64-113.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:46:15 : Group 114 of 234, Calling Peaks with MACS2!, 210.702 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT3._.Mouse_DH_SEA2253A69-114 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT3._.Mouse_DH_SEA2253A69-114.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:47:47 : Group 115 of 234, Calling Peaks with MACS2!, 212.223 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A59-115 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A59-115.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:49:26 : Group 116 of 234, Calling Peaks with MACS2!, 213.882 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A60-116 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A60-116.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:51:05 : Group 117 of 234, Calling Peaks with MACS2!, 215.535 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A61-117 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A61-117.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:52:44 : Group 118 of 234, Calling Peaks with MACS2!, 217.185 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A62-118 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A62-118.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:54:27 : Group 119 of 234, Calling Peaks with MACS2!, 218.901 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A63-119 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A63-119.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:55:55 : Group 120 of 234, Calling Peaks with MACS2!, 220.37 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A58-120 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A58-120.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:57:25 : Group 121 of 234, Calling Peaks with MACS2!, 221.865 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A66-121 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A66-121.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 14:58:42 : Group 122 of 234, Calling Peaks with MACS2!, 223.145 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A64-122 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A64-122.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:00:32 : Group 123 of 234, Calling Peaks with MACS2!, 224.985 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A65-123 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A65-123.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:02:31 : Group 124 of 234, Calling Peaks with MACS2!, 226.96 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A69-124 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A69-124.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:04:17 : Group 125 of 234, Calling Peaks with MACS2!, 228.735 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT4._.Mouse_DH_SEA2253A68-125 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT4._.Mouse_DH_SEA2253A68-125.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:06:06 : Group 126 of 234, Calling Peaks with MACS2!, 230.55 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A60-126 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A60-126.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:08:23 : Group 127 of 234, Calling Peaks with MACS2!, 232.828 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A59-127 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A59-127.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:10:28 : Group 128 of 234, Calling Peaks with MACS2!, 234.916 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A63-128 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A63-128.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:12:34 : Group 129 of 234, Calling Peaks with MACS2!, 237.006 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A61-129 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A61-129.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:14:53 : Group 130 of 234, Calling Peaks with MACS2!, 239.333 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A58-130 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A58-130.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:17:02 : Group 131 of 234, Calling Peaks with MACS2!, 241.477 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A62-131 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A62-131.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:19:00 : Group 132 of 234, Calling Peaks with MACS2!, 243.44 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A64-132 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A64-132.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:21:20 : Group 133 of 234, Calling Peaks with MACS2!, 245.775 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A65-133 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A65-133.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:23:43 : Group 134 of 234, Calling Peaks with MACS2!, 248.157 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A69-134 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A69-134.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:25:56 : Group 135 of 234, Calling Peaks with MACS2!, 250.386 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A66-135 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A66-135.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:28:18 : Group 136 of 234, Calling Peaks with MACS2!, 252.74 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT6._.Mouse_DH_SEA2253A67-136 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT6._.Mouse_DH_SEA2253A67-136.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:30:42 : Group 137 of 234, Calling Peaks with MACS2!, 255.152 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A60-137 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A60-137.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:32:34 : Group 138 of 234, Calling Peaks with MACS2!, 257.005 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A62-138 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A62-138.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:34:21 : Group 139 of 234, Calling Peaks with MACS2!, 258.796 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A63-139 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A63-139.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:36:42 : Group 140 of 234, Calling Peaks with MACS2!, 261.152 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A61-140 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A61-140.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:38:44 : Group 141 of 234, Calling Peaks with MACS2!, 263.178 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A58-141 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A58-141.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:40:30 : Group 142 of 234, Calling Peaks with MACS2!, 264.955 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A59-142 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A59-142.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:42:23 : Group 143 of 234, Calling Peaks with MACS2!, 266.831 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A66-143 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A66-143.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:44:31 : Group 144 of 234, Calling Peaks with MACS2!, 268.957 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A67-144 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A67-144.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:46:36 : Group 145 of 234, Calling Peaks with MACS2!, 271.046 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A69-145 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A69-145.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:48:28 : Group 146 of 234, Calling Peaks with MACS2!, 272.92 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A64-146 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A64-146.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:50:13 : Group 147 of 234, Calling Peaks with MACS2!, 274.664 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT7._.Mouse_DH_SEA2253A65-147 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT7._.Mouse_DH_SEA2253A65-147.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:52:23 : Group 148 of 234, Calling Peaks with MACS2!, 276.825 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A60-148 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A60-148.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:53:57 : Group 149 of 234, Calling Peaks with MACS2!, 278.399 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A61-149 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A61-149.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:55:48 : Group 150 of 234, Calling Peaks with MACS2!, 280.24 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A59-150 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A59-150.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:57:12 : Group 151 of 234, Calling Peaks with MACS2!, 281.655 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A63-151 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A63-151.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 15:58:47 : Group 152 of 234, Calling Peaks with MACS2!, 283.228 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A58-152 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A58-152.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:00:19 : Group 153 of 234, Calling Peaks with MACS2!, 284.764 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A62-153 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A62-153.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:01:51 : Group 154 of 234, Calling Peaks with MACS2!, 286.292 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A67-154 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A67-154.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:03:59 : Group 155 of 234, Calling Peaks with MACS2!, 288.43 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A64-155 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A64-155.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:05:41 : Group 156 of 234, Calling Peaks with MACS2!, 290.128 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A65-156 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A65-156.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:07:32 : Group 157 of 234, Calling Peaks with MACS2!, 291.983 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A66-157 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A66-157.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:09:30 : Group 158 of 234, Calling Peaks with MACS2!, 293.94 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT8._.Mouse_DH_SEA2253A69-158 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT8._.Mouse_DH_SEA2253A69-158.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:11:07 : Group 159 of 234, Calling Peaks with MACS2!, 295.569 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT9._.Rep1-159 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT9._.Rep1-159.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:12:05 : Group 160 of 234, Calling Peaks with MACS2!, 296.534 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT9._.Rep2-160 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT9._.Rep2-160.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:13:01 : Group 161 of 234, Calling Peaks with MACS2!, 297.463 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT9._.Rep3-161 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT9._.Rep3-161.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:13:58 : Group 162 of 234, Calling Peaks with MACS2!, 298.411 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT9._.Rep4-162 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT9._.Rep4-162.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:14:51 : Group 163 of 234, Calling Peaks with MACS2!, 299.291 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT9._.Rep5-163 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT9._.Rep5-163.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:15:46 : Group 164 of 234, Calling Peaks with MACS2!, 300.215 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT10._.Rep1-164 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT10._.Rep1-164.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:16:57 : Group 165 of 234, Calling Peaks with MACS2!, 301.389 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT10._.Rep2-165 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT10._.Rep2-165.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:18:19 : Group 166 of 234, Calling Peaks with MACS2!, 302.771 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT10._.Rep3-166 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT10._.Rep3-166.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:19:28 : Group 167 of 234, Calling Peaks with MACS2!, 303.906 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT10._.Rep4-167 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT10._.Rep4-167.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:20:44 : Group 168 of 234, Calling Peaks with MACS2!, 305.184 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name GLUT10._.Rep5-168 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/GLUT10._.Rep5-168.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:21:46 : Group 169 of 234, Calling Peaks with MACS2!, 306.22 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A62-169 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A62-169.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:23:07 : Group 170 of 234, Calling Peaks with MACS2!, 307.559 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A59-170 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A59-170.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:24:21 : Group 171 of 234, Calling Peaks with MACS2!, 308.792 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A58-171 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A58-171.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:25:51 : Group 172 of 234, Calling Peaks with MACS2!, 310.289 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A63-172 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A63-172.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:27:02 : Group 173 of 234, Calling Peaks with MACS2!, 311.479 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A65-173 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A65-173.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:28:00 : Group 174 of 234, Calling Peaks with MACS2!, 312.446 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A61-174 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A61-174.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:29:27 : Group 175 of 234, Calling Peaks with MACS2!, 313.89 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A60-175 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A60-175.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:30:41 : Group 176 of 234, Calling Peaks with MACS2!, 315.123 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A67-176 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A67-176.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:31:41 : Group 177 of 234, Calling Peaks with MACS2!, 316.138 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A66-177 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A66-177.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:32:38 : Group 178 of 234, Calling Peaks with MACS2!, 317.074 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A69-178 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A69-178.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:34:58 : Group 179 of 234, Calling Peaks with MACS2!, 319.408 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Meninges._.Mouse_DH_SEA2253A68-179 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Meninges._.Mouse_DH_SEA2253A68-179.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:36:30 : Group 180 of 234, Calling Peaks with MACS2!, 320.945 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A59-180 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A59-180.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:37:37 : Group 181 of 234, Calling Peaks with MACS2!, 322.062 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A60-181 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A60-181.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:38:45 : Group 182 of 234, Calling Peaks with MACS2!, 323.201 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A62-182 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A62-182.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:39:54 : Group 183 of 234, Calling Peaks with MACS2!, 324.35 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A61-183 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A61-183.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:41:06 : Group 184 of 234, Calling Peaks with MACS2!, 325.541 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A63-184 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A63-184.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:42:03 : Group 185 of 234, Calling Peaks with MACS2!, 326.492 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A58-185 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A58-185.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:43:03 : Group 186 of 234, Calling Peaks with MACS2!, 327.497 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A69-186 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A69-186.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:44:12 : Group 187 of 234, Calling Peaks with MACS2!, 328.648 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A64-187 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A64-187.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:45:24 : Group 188 of 234, Calling Peaks with MACS2!, 329.854 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A67-188 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A67-188.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:46:33 : Group 189 of 234, Calling Peaks with MACS2!, 331.002 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A65-189 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A65-189.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:47:43 : Group 190 of 234, Calling Peaks with MACS2!, 332.163 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Microglia._.Mouse_DH_SEA2253A66-190 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Microglia._.Mouse_DH_SEA2253A66-190.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:48:49 : Group 191 of 234, Calling Peaks with MACS2!, 333.263 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A60-191 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A60-191.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:50:51 : Group 192 of 234, Calling Peaks with MACS2!, 335.291 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A59-192 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A59-192.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:53:04 : Group 193 of 234, Calling Peaks with MACS2!, 337.509 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A61-193 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A61-193.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:55:36 : Group 194 of 234, Calling Peaks with MACS2!, 340.039 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A62-194 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A62-194.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:57:44 : Group 195 of 234, Calling Peaks with MACS2!, 342.182 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A63-195 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A63-195.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 16:59:45 : Group 196 of 234, Calling Peaks with MACS2!, 344.203 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A58-196 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A58-196.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:01:52 : Group 197 of 234, Calling Peaks with MACS2!, 346.319 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A65-197 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A65-197.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:04:01 : Group 198 of 234, Calling Peaks with MACS2!, 348.47 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A67-198 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A67-198.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:06:23 : Group 199 of 234, Calling Peaks with MACS2!, 350.823 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A64-199 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A64-199.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:08:29 : Group 200 of 234, Calling Peaks with MACS2!, 352.925 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A66-200 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A66-200.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:10:23 : Group 201 of 234, Calling Peaks with MACS2!, 354.83 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name midVen._.Mouse_DH_SEA2253A68-201 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/midVen._.Mouse_DH_SEA2253A68-201.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:12:31 : Group 202 of 234, Calling Peaks with MACS2!, 356.956 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A67-202 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A67-202.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:15:52 : Group 203 of 234, Calling Peaks with MACS2!, 360.316 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A58-203 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A58-203.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:18:44 : Group 204 of 234, Calling Peaks with MACS2!, 363.177 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A64-204 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A64-204.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:21:52 : Group 205 of 234, Calling Peaks with MACS2!, 366.312 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A65-205 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A65-205.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:25:20 : Group 206 of 234, Calling Peaks with MACS2!, 369.782 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A63-206 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A63-206.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:28:21 : Group 207 of 234, Calling Peaks with MACS2!, 372.801 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A61-207 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A61-207.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:31:22 : Group 208 of 234, Calling Peaks with MACS2!, 375.817 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A69-208 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A69-208.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:34:30 : Group 209 of 234, Calling Peaks with MACS2!, 378.947 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A59-209 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A59-209.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:37:29 : Group 210 of 234, Calling Peaks with MACS2!, 381.935 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A68-210 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A68-210.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:40:42 : Group 211 of 234, Calling Peaks with MACS2!, 385.152 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A60-211 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A60-211.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:43:30 : Group 212 of 234, Calling Peaks with MACS2!, 387.938 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.1._.Mouse_DH_SEA2253A62-212 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.1._.Mouse_DH_SEA2253A62-212.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:46:19 : Group 213 of 234, Calling Peaks with MACS2!, 390.761 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A63-213 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A63-213.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:47:45 : Group 214 of 234, Calling Peaks with MACS2!, 392.2 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A60-214 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A60-214.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:49:08 : Group 215 of 234, Calling Peaks with MACS2!, 393.584 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A59-215 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A59-215.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:50:22 : Group 216 of 234, Calling Peaks with MACS2!, 394.821 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A58-216 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A58-216.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:51:41 : Group 217 of 234, Calling Peaks with MACS2!, 396.122 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A62-217 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A62-217.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:52:50 : Group 218 of 234, Calling Peaks with MACS2!, 397.283 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A61-218 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A61-218.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:54:03 : Group 219 of 234, Calling Peaks with MACS2!, 398.496 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A69-219 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A69-219.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:55:21 : Group 220 of 234, Calling Peaks with MACS2!, 399.8 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A66-220 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A66-220.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:56:39 : Group 221 of 234, Calling Peaks with MACS2!, 401.09 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A64-221 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A64-221.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:57:42 : Group 222 of 234, Calling Peaks with MACS2!, 402.153 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A67-222 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A67-222.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 17:59:11 : Group 223 of 234, Calling Peaks with MACS2!, 403.629 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name Oligo.2._.Mouse_DH_SEA2253A68-223 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/Oligo.2._.Mouse_DH_SEA2253A68-223.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:00:12 : Group 224 of 234, Calling Peaks with MACS2!, 404.64 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A60-224 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A60-224.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:01:58 : Group 225 of 234, Calling Peaks with MACS2!, 406.417 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A59-225 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A59-225.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:03:43 : Group 226 of 234, Calling Peaks with MACS2!, 408.165 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A62-226 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A62-226.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:05:21 : Group 227 of 234, Calling Peaks with MACS2!, 409.803 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A58-227 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A58-227.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:07:02 : Group 228 of 234, Calling Peaks with MACS2!, 411.485 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A63-228 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A63-228.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:08:54 : Group 229 of 234, Calling Peaks with MACS2!, 413.345 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A61-229 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A61-229.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:10:34 : Group 230 of 234, Calling Peaks with MACS2!, 415.005 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A66-230 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A66-230.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:12:30 : Group 231 of 234, Calling Peaks with MACS2!, 416.953 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A69-231 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A69-231.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:14:12 : Group 232 of 234, Calling Peaks with MACS2!, 418.64 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A64-232 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A64-232.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:15:48 : Group 233 of 234, Calling Peaks with MACS2!, 420.238 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A68-233 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A68-233.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:17:24 : Group 234 of 234, Calling Peaks with MACS2!, 421.845 mins elapsed.

Running Macs2 with Params : macs2 callpeak -g 2.7e+09 --name OPC._.Mouse_DH_SEA2253A67-234 --treatment /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds/OPC._.Mouse_DH_SEA2253A67-234.insertions.bed --outdir /projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/InsertionBeds --format BED --call-summits --keep-dup all --nomodel --nolambda --shift -75 --extsize 150 -q 0.1

2022-10-18 18:19:29 : Identifying Reproducible Peaks!, 423.935 mins elapsed.

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/Astrocyte.1-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/Astrocyte.2-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/Ependymal.cells-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GABA1-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GABA2-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GABA3-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GABA4-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GABA5-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT1-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT10-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT2-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT3-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT4-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT6-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT7-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT8-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/GLUT9-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/Meninges-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/Microglia-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/midVen-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/Oligo.1-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/Oligo.2-reproduciblePeaks.gr.rds"

Annotating Peaks : Nearest Gene

Annotating Peaks : Gene

Annotating Peaks : TSS

Annotating Peaks : GC


[1] "/projects/pfenninggroup/singleCell/Macaque_SealDorsalHorn_snATAC-seq/data/tidy_data/ArchRProjects/Mouse_DorsalHorn_scATAC/PeakCalls/OPC-reproduciblePeaks.gr.rds"

2022-10-18 18:26:56 : Creating Union Peak Set!, 431.393 mins elapsed.

Converged after 10 iterations!

2022-10-18 18:27:07 : Finished Creating Union Peak Set (515303)!, 431.562 mins elapsed.
In [7]:
# add peak counts matrix 
proj <- addPeakMatrix(proj)

ArchR logging to : ArchRLogs/ArchR-addPeakMatrix-c6532faa4393-Date-2022-10-18_Time-18-58-45.log
If there is an issue, please report to github with logFile!

2022-10-18 18:58:51 : Batch Execution w/ safelapply!, 0 mins elapsed.

2022-10-18 18:58:58 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (1 of 20)!, 0.053 mins elapsed.

2022-10-18 18:59:10 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (2 of 20)!, 0.255 mins elapsed.

2022-10-18 18:59:21 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (3 of 20)!, 0.433 mins elapsed.

2022-10-18 18:59:30 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (4 of 20)!, 0.576 mins elapsed.

2022-10-18 18:59:42 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (5 of 20)!, 0.783 mins elapsed.

2022-10-18 18:59:51 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (6 of 20)!, 0.937 mins elapsed.

2022-10-18 18:59:58 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (7 of 20)!, 1.055 mins elapsed.

2022-10-18 19:00:09 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (8 of 20)!, 1.226 mins elapsed.

2022-10-18 19:00:18 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (9 of 20)!, 1.39 mins elapsed.

2022-10-18 19:00:29 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (10 of 20)!, 1.559 mins elapsed.

2022-10-18 19:00:35 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (11 of 20)!, 1.673 mins elapsed.

2022-10-18 19:00:45 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (12 of 20)!, 1.841 mins elapsed.

2022-10-18 19:00:55 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (13 of 20)!, 2.008 mins elapsed.

2022-10-18 19:01:01 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (14 of 20)!, 2.104 mins elapsed.

2022-10-18 19:01:07 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (15 of 20)!, 2.197 mins elapsed.

2022-10-18 19:01:15 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (16 of 20)!, 2.331 mins elapsed.

2022-10-18 19:01:20 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (17 of 20)!, 2.419 mins elapsed.

2022-10-18 19:01:29 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (18 of 20)!, 2.568 mins elapsed.

2022-10-18 19:01:37 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (19 of 20)!, 2.7 mins elapsed.

2022-10-18 19:01:43 : Adding Mouse_DH_SEA2253A61 to PeakMatrix for Chr (20 of 20)!, 2.796 mins elapsed.

2022-10-18 19:01:54 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (1 of 20)!, 0.026 mins elapsed.

2022-10-18 19:02:03 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (2 of 20)!, 0.166 mins elapsed.

2022-10-18 19:02:16 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (3 of 20)!, 0.384 mins elapsed.

2022-10-18 19:02:25 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (4 of 20)!, 0.539 mins elapsed.

2022-10-18 19:02:38 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (5 of 20)!, 0.758 mins elapsed.

2022-10-18 19:02:50 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (6 of 20)!, 0.953 mins elapsed.

2022-10-18 19:03:00 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (7 of 20)!, 1.126 mins elapsed.

2022-10-18 19:03:10 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (8 of 20)!, 1.287 mins elapsed.

2022-10-18 19:03:18 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (9 of 20)!, 1.427 mins elapsed.

2022-10-18 19:03:28 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (10 of 20)!, 1.594 mins elapsed.

2022-10-18 19:03:38 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (11 of 20)!, 1.762 mins elapsed.

2022-10-18 19:03:49 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (12 of 20)!, 1.939 mins elapsed.

2022-10-18 19:03:55 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (13 of 20)!, 2.042 mins elapsed.

2022-10-18 19:04:03 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (14 of 20)!, 2.168 mins elapsed.

2022-10-18 19:04:09 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (15 of 20)!, 2.277 mins elapsed.

2022-10-18 19:04:16 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (16 of 20)!, 2.393 mins elapsed.

2022-10-18 19:04:24 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (17 of 20)!, 2.52 mins elapsed.

2022-10-18 19:04:32 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (18 of 20)!, 2.651 mins elapsed.

2022-10-18 19:04:38 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (19 of 20)!, 2.763 mins elapsed.

2022-10-18 19:04:44 : Adding Mouse_DH_SEA2253A60 to PeakMatrix for Chr (20 of 20)!, 2.861 mins elapsed.

2022-10-18 19:04:52 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (1 of 20)!, 0.033 mins elapsed.

2022-10-18 19:05:02 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (2 of 20)!, 0.199 mins elapsed.

2022-10-18 19:05:15 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (3 of 20)!, 0.416 mins elapsed.

2022-10-18 19:05:21 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (4 of 20)!, 0.521 mins elapsed.

2022-10-18 19:05:30 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (5 of 20)!, 0.668 mins elapsed.

2022-10-18 19:05:39 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (6 of 20)!, 0.824 mins elapsed.

2022-10-18 19:05:46 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (7 of 20)!, 0.939 mins elapsed.

2022-10-18 19:05:58 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (8 of 20)!, 1.135 mins elapsed.

2022-10-18 19:06:08 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (9 of 20)!, 1.296 mins elapsed.

2022-10-18 19:06:18 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (10 of 20)!, 1.469 mins elapsed.

2022-10-18 19:06:33 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (11 of 20)!, 1.724 mins elapsed.

2022-10-18 19:06:44 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (12 of 20)!, 1.896 mins elapsed.

2022-10-18 19:06:51 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (13 of 20)!, 2.016 mins elapsed.

2022-10-18 19:06:59 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (14 of 20)!, 2.149 mins elapsed.

2022-10-18 19:07:07 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (15 of 20)!, 2.287 mins elapsed.

2022-10-18 19:07:16 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (16 of 20)!, 2.431 mins elapsed.

2022-10-18 19:07:23 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (17 of 20)!, 2.555 mins elapsed.

2022-10-18 19:07:30 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (18 of 20)!, 2.679 mins elapsed.

2022-10-18 19:07:36 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (19 of 20)!, 2.763 mins elapsed.

2022-10-18 19:07:41 : Adding Mouse_DH_SEA2253A62 to PeakMatrix for Chr (20 of 20)!, 2.861 mins elapsed.

2022-10-18 19:07:54 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (1 of 20)!, 0.06 mins elapsed.

2022-10-18 19:08:04 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (2 of 20)!, 0.228 mins elapsed.

2022-10-18 19:08:13 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (3 of 20)!, 0.391 mins elapsed.

2022-10-18 19:08:21 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (4 of 20)!, 0.512 mins elapsed.

2022-10-18 19:08:31 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (5 of 20)!, 0.691 mins elapsed.

2022-10-18 19:08:39 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (6 of 20)!, 0.822 mins elapsed.

2022-10-18 19:08:49 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (7 of 20)!, 0.984 mins elapsed.

2022-10-18 19:08:59 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (8 of 20)!, 1.157 mins elapsed.

2022-10-18 19:09:10 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (9 of 20)!, 1.337 mins elapsed.

2022-10-18 19:09:20 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (10 of 20)!, 1.502 mins elapsed.

2022-10-18 19:09:28 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (11 of 20)!, 1.631 mins elapsed.

2022-10-18 19:09:39 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (12 of 20)!, 1.824 mins elapsed.

2022-10-18 19:09:48 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (13 of 20)!, 1.963 mins elapsed.

2022-10-18 19:09:55 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (14 of 20)!, 2.081 mins elapsed.

2022-10-18 19:10:01 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (15 of 20)!, 2.188 mins elapsed.

2022-10-18 19:10:09 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (16 of 20)!, 2.313 mins elapsed.

2022-10-18 19:10:14 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (17 of 20)!, 2.402 mins elapsed.

2022-10-18 19:10:21 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (18 of 20)!, 2.526 mins elapsed.

2022-10-18 19:10:29 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (19 of 20)!, 2.65 mins elapsed.

2022-10-18 19:10:35 : Adding Mouse_DH_SEA2253A59 to PeakMatrix for Chr (20 of 20)!, 2.746 mins elapsed.

2022-10-18 19:10:44 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (1 of 20)!, 0.056 mins elapsed.

2022-10-18 19:10:54 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (2 of 20)!, 0.221 mins elapsed.

2022-10-18 19:11:05 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (3 of 20)!, 0.4 mins elapsed.

2022-10-18 19:11:12 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (4 of 20)!, 0.519 mins elapsed.

2022-10-18 19:11:20 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (5 of 20)!, 0.662 mins elapsed.

2022-10-18 19:11:30 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (6 of 20)!, 0.817 mins elapsed.

2022-10-18 19:11:39 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (7 of 20)!, 0.966 mins elapsed.

2022-10-18 19:11:48 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (8 of 20)!, 1.126 mins elapsed.

2022-10-18 19:11:56 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (9 of 20)!, 1.249 mins elapsed.

2022-10-18 19:12:04 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (10 of 20)!, 1.385 mins elapsed.

2022-10-18 19:12:11 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (11 of 20)!, 1.502 mins elapsed.

2022-10-18 19:12:19 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (12 of 20)!, 1.639 mins elapsed.

2022-10-18 19:12:26 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (13 of 20)!, 1.751 mins elapsed.

2022-10-18 19:12:34 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (14 of 20)!, 1.889 mins elapsed.

2022-10-18 19:12:40 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (15 of 20)!, 1.992 mins elapsed.

2022-10-18 19:12:47 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (16 of 20)!, 2.11 mins elapsed.

2022-10-18 19:12:53 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (17 of 20)!, 2.2 mins elapsed.

2022-10-18 19:13:00 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (18 of 20)!, 2.319 mins elapsed.

2022-10-18 19:13:06 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (19 of 20)!, 2.415 mins elapsed.

2022-10-18 19:13:11 : Adding Mouse_DH_SEA2253A63 to PeakMatrix for Chr (20 of 20)!, 2.503 mins elapsed.

2022-10-18 19:13:25 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (1 of 20)!, 0.072 mins elapsed.

2022-10-18 19:13:36 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (2 of 20)!, 0.249 mins elapsed.

2022-10-18 19:13:49 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (3 of 20)!, 0.466 mins elapsed.

2022-10-18 19:13:58 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (4 of 20)!, 0.615 mins elapsed.

2022-10-18 19:14:07 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (5 of 20)!, 0.774 mins elapsed.

2022-10-18 19:14:16 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (6 of 20)!, 0.917 mins elapsed.

2022-10-18 19:14:26 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (7 of 20)!, 1.082 mins elapsed.

2022-10-18 19:14:34 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (8 of 20)!, 1.218 mins elapsed.

2022-10-18 19:14:43 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (9 of 20)!, 1.367 mins elapsed.

2022-10-18 19:14:53 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (10 of 20)!, 1.53 mins elapsed.

2022-10-18 19:15:01 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (11 of 20)!, 1.674 mins elapsed.

2022-10-18 19:15:12 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (12 of 20)!, 1.843 mins elapsed.

2022-10-18 19:15:18 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (13 of 20)!, 1.953 mins elapsed.

2022-10-18 19:15:26 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (14 of 20)!, 2.092 mins elapsed.

2022-10-18 19:15:32 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (15 of 20)!, 2.188 mins elapsed.

2022-10-18 19:15:40 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (16 of 20)!, 2.311 mins elapsed.

2022-10-18 19:15:45 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (17 of 20)!, 2.406 mins elapsed.

2022-10-18 19:15:55 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (18 of 20)!, 2.565 mins elapsed.

2022-10-18 19:16:00 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (19 of 20)!, 2.653 mins elapsed.

2022-10-18 19:16:05 : Adding Mouse_DH_SEA2253A58 to PeakMatrix for Chr (20 of 20)!, 2.738 mins elapsed.

2022-10-18 19:16:14 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (1 of 20)!, 0.036 mins elapsed.

2022-10-18 19:16:22 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (2 of 20)!, 0.167 mins elapsed.

2022-10-18 19:16:33 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (3 of 20)!, 0.35 mins elapsed.

2022-10-18 19:16:41 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (4 of 20)!, 0.48 mins elapsed.

2022-10-18 19:16:53 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (5 of 20)!, 0.696 mins elapsed.

2022-10-18 19:17:05 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (6 of 20)!, 0.883 mins elapsed.

2022-10-18 19:17:14 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (7 of 20)!, 1.038 mins elapsed.

2022-10-18 19:17:23 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (8 of 20)!, 1.189 mins elapsed.

2022-10-18 19:17:33 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (9 of 20)!, 1.355 mins elapsed.

2022-10-18 19:17:42 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (10 of 20)!, 1.507 mins elapsed.

2022-10-18 19:17:50 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (11 of 20)!, 1.639 mins elapsed.

2022-10-18 19:18:01 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (12 of 20)!, 1.829 mins elapsed.

2022-10-18 19:18:09 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (13 of 20)!, 1.951 mins elapsed.

2022-10-18 19:18:16 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (14 of 20)!, 2.068 mins elapsed.

2022-10-18 19:18:22 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (15 of 20)!, 2.165 mins elapsed.

2022-10-18 19:18:31 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (16 of 20)!, 2.321 mins elapsed.

2022-10-18 19:18:37 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (17 of 20)!, 2.418 mins elapsed.

2022-10-18 19:18:43 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (18 of 20)!, 2.523 mins elapsed.

2022-10-18 19:18:49 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (19 of 20)!, 2.626 mins elapsed.

2022-10-18 19:18:56 : Adding Mouse_DH_SEA2253A66 to PeakMatrix for Chr (20 of 20)!, 2.734 mins elapsed.

2022-10-18 19:19:06 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (1 of 20)!, 0.031 mins elapsed.

2022-10-18 19:19:15 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (2 of 20)!, 0.194 mins elapsed.

2022-10-18 19:19:26 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (3 of 20)!, 0.365 mins elapsed.

2022-10-18 19:19:32 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (4 of 20)!, 0.472 mins elapsed.

2022-10-18 19:19:41 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (5 of 20)!, 0.621 mins elapsed.

2022-10-18 19:19:48 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (6 of 20)!, 0.744 mins elapsed.

2022-10-18 19:19:56 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (7 of 20)!, 0.865 mins elapsed.

2022-10-18 19:20:06 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (8 of 20)!, 1.029 mins elapsed.

2022-10-18 19:20:15 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (9 of 20)!, 1.187 mins elapsed.

2022-10-18 19:20:23 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (10 of 20)!, 1.314 mins elapsed.

2022-10-18 19:20:29 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (11 of 20)!, 1.421 mins elapsed.

2022-10-18 19:20:39 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (12 of 20)!, 1.59 mins elapsed.

2022-10-18 19:20:46 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (13 of 20)!, 1.698 mins elapsed.

2022-10-18 19:20:51 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (14 of 20)!, 1.793 mins elapsed.

2022-10-18 19:20:57 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (15 of 20)!, 1.89 mins elapsed.

2022-10-18 19:21:04 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (16 of 20)!, 2.004 mins elapsed.

2022-10-18 19:21:11 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (17 of 20)!, 2.112 mins elapsed.

2022-10-18 19:21:18 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (18 of 20)!, 2.238 mins elapsed.

2022-10-18 19:21:25 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (19 of 20)!, 2.357 mins elapsed.

2022-10-18 19:21:31 : Adding Mouse_DH_SEA2253A67 to PeakMatrix for Chr (20 of 20)!, 2.448 mins elapsed.

2022-10-18 19:21:44 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (1 of 20)!, 0.036 mins elapsed.

2022-10-18 19:21:53 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (2 of 20)!, 0.178 mins elapsed.

2022-10-18 19:22:03 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (3 of 20)!, 0.345 mins elapsed.

2022-10-18 19:22:11 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (4 of 20)!, 0.484 mins elapsed.

2022-10-18 19:22:20 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (5 of 20)!, 0.631 mins elapsed.

2022-10-18 19:22:29 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (6 of 20)!, 0.774 mins elapsed.

2022-10-18 19:22:36 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (7 of 20)!, 0.897 mins elapsed.

2022-10-18 19:22:47 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (8 of 20)!, 1.082 mins elapsed.

2022-10-18 19:22:55 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (9 of 20)!, 1.206 mins elapsed.

2022-10-18 19:23:02 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (10 of 20)!, 1.337 mins elapsed.

2022-10-18 19:23:08 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (11 of 20)!, 1.438 mins elapsed.

2022-10-18 19:23:19 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (12 of 20)!, 1.62 mins elapsed.

2022-10-18 19:23:29 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (13 of 20)!, 1.786 mins elapsed.

2022-10-18 19:23:37 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (14 of 20)!, 1.919 mins elapsed.

2022-10-18 19:23:44 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (15 of 20)!, 2.031 mins elapsed.

2022-10-18 19:23:52 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (16 of 20)!, 2.165 mins elapsed.

2022-10-18 19:23:57 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (17 of 20)!, 2.252 mins elapsed.

2022-10-18 19:24:05 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (18 of 20)!, 2.374 mins elapsed.

2022-10-18 19:24:10 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (19 of 20)!, 2.456 mins elapsed.

2022-10-18 19:24:14 : Adding Mouse_DH_SEA2253A65 to PeakMatrix for Chr (20 of 20)!, 2.533 mins elapsed.

2022-10-18 19:24:28 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (1 of 20)!, 0.03 mins elapsed.

2022-10-18 19:24:38 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (2 of 20)!, 0.198 mins elapsed.

2022-10-18 19:24:46 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (3 of 20)!, 0.33 mins elapsed.

2022-10-18 19:24:53 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (4 of 20)!, 0.454 mins elapsed.

2022-10-18 19:25:01 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (5 of 20)!, 0.579 mins elapsed.

2022-10-18 19:25:10 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (6 of 20)!, 0.727 mins elapsed.

2022-10-18 19:25:17 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (7 of 20)!, 0.855 mins elapsed.

2022-10-18 19:25:25 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (8 of 20)!, 0.982 mins elapsed.

2022-10-18 19:25:33 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (9 of 20)!, 1.113 mins elapsed.

2022-10-18 19:25:43 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (10 of 20)!, 1.29 mins elapsed.

2022-10-18 19:25:53 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (11 of 20)!, 1.449 mins elapsed.

2022-10-18 19:26:07 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (12 of 20)!, 1.676 mins elapsed.

2022-10-18 19:26:14 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (13 of 20)!, 1.796 mins elapsed.

2022-10-18 19:26:21 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (14 of 20)!, 1.916 mins elapsed.

2022-10-18 19:26:26 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (15 of 20)!, 1.999 mins elapsed.

2022-10-18 19:26:33 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (16 of 20)!, 2.116 mins elapsed.

2022-10-18 19:26:38 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (17 of 20)!, 2.202 mins elapsed.

2022-10-18 19:26:45 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (18 of 20)!, 2.309 mins elapsed.

2022-10-18 19:26:50 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (19 of 20)!, 2.398 mins elapsed.

2022-10-18 19:26:55 : Adding Mouse_DH_SEA2253A69 to PeakMatrix for Chr (20 of 20)!, 2.489 mins elapsed.

2022-10-18 19:27:10 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (1 of 20)!, 0.069 mins elapsed.

2022-10-18 19:27:17 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (2 of 20)!, 0.191 mins elapsed.

2022-10-18 19:27:28 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (3 of 20)!, 0.37 mins elapsed.

2022-10-18 19:27:36 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (4 of 20)!, 0.496 mins elapsed.

2022-10-18 19:27:45 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (5 of 20)!, 0.656 mins elapsed.

2022-10-18 19:27:55 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (6 of 20)!, 0.816 mins elapsed.

2022-10-18 19:28:02 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (7 of 20)!, 0.942 mins elapsed.

2022-10-18 19:28:10 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (8 of 20)!, 1.073 mins elapsed.

2022-10-18 19:28:18 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (9 of 20)!, 1.206 mins elapsed.

2022-10-18 19:28:25 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (10 of 20)!, 1.317 mins elapsed.

2022-10-18 19:28:33 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (11 of 20)!, 1.446 mins elapsed.

2022-10-18 19:28:41 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (12 of 20)!, 1.588 mins elapsed.

2022-10-18 19:28:47 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (13 of 20)!, 1.679 mins elapsed.

2022-10-18 19:28:54 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (14 of 20)!, 1.8 mins elapsed.

2022-10-18 19:29:01 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (15 of 20)!, 1.925 mins elapsed.

2022-10-18 19:29:07 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (16 of 20)!, 2.024 mins elapsed.

2022-10-18 19:29:15 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (17 of 20)!, 2.152 mins elapsed.

2022-10-18 19:29:23 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (18 of 20)!, 2.286 mins elapsed.

2022-10-18 19:29:28 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (19 of 20)!, 2.366 mins elapsed.

2022-10-18 19:29:32 : Adding Mouse_DH_SEA2253A68 to PeakMatrix for Chr (20 of 20)!, 2.438 mins elapsed.

2022-10-18 19:29:40 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (1 of 20)!, 0.028 mins elapsed.

2022-10-18 19:29:50 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (2 of 20)!, 0.195 mins elapsed.

2022-10-18 19:30:00 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (3 of 20)!, 0.352 mins elapsed.

2022-10-18 19:30:08 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (4 of 20)!, 0.486 mins elapsed.

2022-10-18 19:30:16 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (5 of 20)!, 0.623 mins elapsed.

2022-10-18 19:30:24 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (6 of 20)!, 0.756 mins elapsed.

2022-10-18 19:30:31 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (7 of 20)!, 0.878 mins elapsed.

2022-10-18 19:30:41 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (8 of 20)!, 1.039 mins elapsed.

2022-10-18 19:30:51 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (9 of 20)!, 1.208 mins elapsed.

2022-10-18 19:31:00 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (10 of 20)!, 1.354 mins elapsed.

2022-10-18 19:31:09 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (11 of 20)!, 1.504 mins elapsed.

2022-10-18 19:31:19 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (12 of 20)!, 1.681 mins elapsed.

2022-10-18 19:31:27 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (13 of 20)!, 1.81 mins elapsed.

2022-10-18 19:31:32 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (14 of 20)!, 1.899 mins elapsed.

2022-10-18 19:31:40 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (15 of 20)!, 2.033 mins elapsed.

2022-10-18 19:31:47 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (16 of 20)!, 2.147 mins elapsed.

2022-10-18 19:31:54 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (17 of 20)!, 2.263 mins elapsed.

2022-10-18 19:32:03 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (18 of 20)!, 2.405 mins elapsed.

2022-10-18 19:32:08 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (19 of 20)!, 2.492 mins elapsed.

2022-10-18 19:32:14 : Adding Mouse_DH_SEA2253A64 to PeakMatrix for Chr (20 of 20)!, 2.588 mins elapsed.

ArchR logging successful to : ArchRLogs/ArchR-addPeakMatrix-c6532faa4393-Date-2022-10-18_Time-18-58-45.log
In [11]:
BiocManager::install("JASPAR2020")
library(JASPAR2020)

'getOption("repos")' replaces Bioconductor standard repositories, see
'?repositories' for details

replacement repositories:
    CRAN: https://cran.r-project.org


Bioconductor version 3.14 (BiocManager 1.30.18), R 4.1.3 (2022-03-10)

Installing package(s) 'JASPAR2020'

Updating HTML index of packages in '.Library'

Making 'packages.html' ...
 done

Old packages: 'brew', 'clue', 'commonmark', 'cpp11', 'curl', 'data.table',
  'desc', 'devtools', 'digest', 'evaluate', 'gargle', 'gert', 'gh', 'gitcreds',
  'haven', 'isoband', 'lifecycle', 'nlme', 'openssl', 'pracma', 'ragg',
  'RCurl', 'readr', 'rmarkdown', 'RSQLite', 'sys', 'testthat', 'tidyselect',
  'tinytex', 'vroom', 'xfun', 'XML', 'yaml', 'zip'
In [8]:
# add motif enrichment matrix
proj <- addMotifAnnotations(ArchRProj = proj, motifSet = "encode", name = "Motif",logFile = createLogFile("addMotifAnnotations"), species = getGenome(proj))

ArchR logging to : ArchRLogs/ArchR-addMotifAnnotations-42efe33ae8736-Date-2022-10-20_Time-10-00-59.log
If there is an issue, please report to github with logFile!


Error in addMotifAnnotations(ArchRProj = proj, motifSet = "encode", name = "Motif", : peakAnnotation name already exists! set force = TRUE to override!
Traceback:

1. addMotifAnnotations(ArchRProj = proj, motifSet = "encode", name = "Motif", 
 .     logFile = createLogFile("addMotifAnnotations"), species = getGenome(proj))
2. stop("peakAnnotation name already exists! set force = TRUE to override!")
In [5]:
# # add motif deviations matrix
proj <- addBgdPeaks(proj, force =  TRUE)

Identifying Background Peaks!
In [ ]:
#BADOI SAID THIS DOESNT NEED TO RUN THANK GOD
#not run
proj <- addDeviationsMatrix(proj,  peakAnnotation = "Motif", force = TRUE)

Using Previous Background Peaks!

ArchR logging to : ArchRLogs/ArchR-addDeviationsMatrix-432904a663880-Date-2022-10-20_Time-11-15-40.log
If there is an issue, please report to github with logFile!


NULL

as(<lgCMatrix>, "dgCMatrix") is deprecated since Matrix 1.5-0; do as(., "dMatrix") instead

2022-10-20 11:16:09 : Batch Execution w/ safelapply!, 0 mins elapsed.
In [11]:
names(attributes(proj)$reducedDims)
  1. 'IterativeLSI30'
  2. 'IterativeLSI200'
  3. 'HarmonyI200'
In [13]:
# add co-accessibility matrix
proj <- addCoAccessibility(proj, reducedDims = "HarmonyI200", dimsToUse = 1:30,
                           scaleDims = TRUE, corCutOff = 0.75, k = 100, 
                           knnIteration = 500, overlapCutoff = 0.8, 
                           maxDist = 1e+05, scaleTo = 10^4, log2Norm = TRUE)

ArchR logging to : ArchRLogs/ArchR-addCoAccessibility-44b7e20e09826-Date-2022-10-21_Time-09-13-02.log
If there is an issue, please report to github with logFile!

2022-10-21 09:13:02 : Computing KNN, 0.003 mins elapsed.

2022-10-21 09:13:03 : Identifying Non-Overlapping KNN pairs, 0.011 mins elapsed.

2022-10-21 09:13:07 : Identified 498 Groupings!, 0.076 mins elapsed.

2022-10-21 09:14:08 : Computing Co-Accessibility chr1 (1 of 20), 1.102 mins elapsed.

2022-10-21 09:14:54 : Computing Co-Accessibility chr2 (2 of 20), 1.87 mins elapsed.

2022-10-21 09:15:52 : Computing Co-Accessibility chr3 (3 of 20), 2.833 mins elapsed.

2022-10-21 09:16:35 : Computing Co-Accessibility chr4 (4 of 20), 3.557 mins elapsed.

2022-10-21 09:17:27 : Computing Co-Accessibility chr5 (5 of 20), 4.413 mins elapsed.

2022-10-21 09:18:18 : Computing Co-Accessibility chr6 (6 of 20), 5.275 mins elapsed.

2022-10-21 09:19:01 : Computing Co-Accessibility chr7 (7 of 20), 5.987 mins elapsed.

2022-10-21 09:19:52 : Computing Co-Accessibility chr8 (8 of 20), 6.828 mins elapsed.

2022-10-21 09:20:30 : Computing Co-Accessibility chr9 (9 of 20), 7.467 mins elapsed.

2022-10-21 09:21:18 : Computing Co-Accessibility chr10 (10 of 20), 8.26 mins elapsed.

2022-10-21 09:22:01 : Computing Co-Accessibility chr11 (11 of 20), 8.977 mins elapsed.

2022-10-21 09:23:01 : Computing Co-Accessibility chr12 (12 of 20), 9.984 mins elapsed.

2022-10-21 09:23:40 : Computing Co-Accessibility chr13 (13 of 20), 10.635 mins elapsed.

2022-10-21 09:24:19 : Computing Co-Accessibility chr14 (14 of 20), 11.277 mins elapsed.

2022-10-21 09:24:53 : Computing Co-Accessibility chr15 (15 of 20), 11.848 mins elapsed.

2022-10-21 09:25:27 : Computing Co-Accessibility chr16 (16 of 20), 12.417 mins elapsed.

2022-10-21 09:26:00 : Computing Co-Accessibility chr17 (17 of 20), 12.961 mins elapsed.

2022-10-21 09:26:38 : Computing Co-Accessibility chr18 (18 of 20), 13.598 mins elapsed.

2022-10-21 09:27:10 : Computing Co-Accessibility chr19 (19 of 20), 14.134 mins elapsed.

2022-10-21 09:27:40 : Computing Co-Accessibility chrX (20 of 20), 14.635 mins elapsed.

ArchR logging successful to : ArchRLogs/ArchR-addCoAccessibility-44b7e20e09826-Date-2022-10-21_Time-09-13-02.log
In [17]:
markerGenes  <- c('ITGB4',#Astrocyte1
                   'GFAP',#Astrocyte1
                   'SLC7A10',#Astrocyte2
                   'PDZRN4'#Astrocyte2
                  )

p <- plotBrowserTrack(
    ArchRProj = proj, 
    groupBy = "ClustersH200", 
    geneSymbol = markerGenes, 
    upstream = 50000,
    downstream = 50000,
    loops = getCoAccessibility(proj)
)

ArchR logging to : ArchRLogs/ArchR-plotBrowserTrack-44b7e797f5dd7-Date-2022-10-21_Time-10-04-51.log
If there is an issue, please report to github with logFile!

2022-10-21 10:04:51 : Validating Region, 0.009 mins elapsed.


GRanges object with 4 ranges and 2 metadata columns:
      seqnames              ranges strand |     gene_id      symbol
         <Rle>           <IRanges>  <Rle> | <character> <character>
  [1]    chr11 115974725-116008411      + |      192897       Itgb4
  [2]    chr11 102887336-102897200      - |       14580        Gfap
  [3]     chr7   35186385-35201111      + |       53896     Slc7a10
  [4]    chr15   92396810-92771819      + |      239618      Pdzrn4
  -------
  seqinfo: 21 sequences from mm10 genome

2022-10-21 10:04:51 : Adding Bulk Tracks (1 of 4), 0.011 mins elapsed.

2022-10-21 10:05:17 : Adding Feature Tracks (1 of 4), 0.437 mins elapsed.

2022-10-21 10:05:17 : Adding Loop Tracks (1 of 4), 0.438 mins elapsed.

2022-10-21 10:05:21 : Adding Gene Tracks (1 of 4), 0.507 mins elapsed.

2022-10-21 10:05:21 : Plotting, 0.51 mins elapsed.

2022-10-21 10:05:25 : Adding Bulk Tracks (2 of 4), 0.574 mins elapsed.

2022-10-21 10:05:45 : Adding Feature Tracks (2 of 4), 0.899 mins elapsed.

2022-10-21 10:05:45 : Adding Loop Tracks (2 of 4), 0.9 mins elapsed.

2022-10-21 10:05:49 : Adding Gene Tracks (2 of 4), 0.969 mins elapsed.

2022-10-21 10:05:50 : Plotting, 0.989 mins elapsed.

2022-10-21 10:05:54 : Adding Bulk Tracks (3 of 4), 1.053 mins elapsed.

2022-10-21 10:06:13 : Adding Feature Tracks (3 of 4), 1.379 mins elapsed.

2022-10-21 10:06:13 : Adding Loop Tracks (3 of 4), 1.38 mins elapsed.

2022-10-21 10:06:23 : Adding Gene Tracks (3 of 4), 1.543 mins elapsed.

2022-10-21 10:06:23 : Plotting, 1.547 mins elapsed.

2022-10-21 10:06:28 : Adding Bulk Tracks (4 of 4), 1.625 mins elapsed.

2022-10-21 10:06:46 : Adding Feature Tracks (4 of 4), 1.93 mins elapsed.

2022-10-21 10:06:46 : Adding Loop Tracks (4 of 4), 1.93 mins elapsed.

2022-10-21 10:06:48 : Adding Gene Tracks (4 of 4), 1.956 mins elapsed.

2022-10-21 10:06:48 : Plotting, 1.959 mins elapsed.

ArchR logging successful to : ArchRLogs/ArchR-plotBrowserTrack-44b7e797f5dd7-Date-2022-10-21_Time-10-04-51.log
In [37]:
proj = saveArchRProject(ArchRProj = proj)

Saving ArchRProject...

Loading ArchRProject...

Successfully loaded ArchRProject!


                                                   / |
                                                 /    \
            .                                  /      |.
            \\\                              /        |.
              \\\                          /           `|.
                \\\                      /              |.
                  \                    /                |\
                  \\#####\           /                  ||
                ==###########>      /                   ||
                 \\##==......\    /                     ||
            ______ =       =|__ /__                     ||      \\\
        ,--' ,----`-,__ ___/'  --,-`-===================##========>
       \               '        ##_______ _____ ,--,__,=##,__   ///
        ,    __==    ___,-,__,--'#'  ==='      `-'    | ##,-/
        -,____,---'       \\####\\________________,--\\_##,/
           ___      .______        ______  __    __  .______      
          /   \     |   _  \      /      ||  |  |  | |   _  \     
         /  ^  \    |  |_)  |    |  ,----'|  |__|  | |  |_)  |    
        /  /_\  \   |      /     |  |     |   __   | |      /     
       /  _____  \  |  |\  \\___ |  `----.|  |  |  | |  |\  \\___.
      /__/     \__\ | _| `._____| \______||__|  |__| | _| `._____|
In [38]:
getAvailableMatrices(proj)
  1. 'GeneScoreMatrix'
  2. 'MotifMatrix'
  3. 'PeakMatrix'
  4. 'TileMatrix'